Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0653300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:33325306:33325943:1 gene:Os04g0653300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aux/IAA_ARF_dimerisation domain containing protein. (Os04t0653300-00)
Sequence

ATGATAAGCGGCGCCGGCGGTGAGCAGCAGCAGCAGCAGGACACGAAGCGGCGGCTACCG
GCGCCGACGACGTCCGAGCAGGAGAGGCGGCAGAAGCAGCACCGCGGGAAGATGCTGAGG
CTGTCGGTGCAGCAGGGCGACGACGTGACCGCGGGCGTGGTGCCGCCGGTCACCGTCGTC
CTGGACGGCCGCTCCATCTGCCACCGCGTCCACCTCAGCAAGCACACCGGCTACCGCAGC
CTCGCCGCCGCGCTCCGCCGCATGTTCGTCGACGCGGACGACGACGTCGGCGCCGCCGAC
GAGGCAGCTGGCAGGAGCAGCTGCAGCGACGCCGACCGTGGCGGCCTCGACCTGTCCAAT
GCCGTTCCAGGGCACGTCGTCGCGTACGAGGACATCGAGAACGACCTCCTCCTCGCCGGC
GACCTCAACTGGAAGGATTTCGTCCGTGTGGCGAGGAGGATTCGGATCATCCCGGCGAAG
CCATCTAGCCGGATGAGGCCTCAATCTTAA

Peptide Sequence

PEP ID

Os04t0653300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:33325306:33325943:1 gene:Os04g0653300 transcript:Os04t0653300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aux/IAA_ARF_dimerisation domain containing protein. (Os04t0653300-00)
Sequence

MISGAGGEQQQQQDTKRRLPAPTTSEQERRQKQHRGKMLRLSVQQGDDVTAGVVPPVTVV
LDGRSICHRVHLSKHTGYRSLAAALRRMFVDADDDVGAADEAAGRSSCSDADRGGLDLSN
AVPGHVVAYEDIENDLLLAGDLNWKDFVRVARRIRIIPAKPSSRMRPQS

Transcript Sequence

Transcript ID

Os04t0653300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33325306:33325943:1 gene:Os04g0653300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aux/IAA_ARF_dimerisation domain containing protein. (Os04t0653300-00)
Sequence

ATGATAAGCGGCGCCGGCGGTGAGCAGCAGCAGCAGCAGGACACGAAGCGGCGGCTACCG
GCGCCGACGACGTCCGAGCAGGAGAGGCGGCAGAAGCAGCACCGCGGGAAGATGCTGAGG
CTGTCGGTGCAGCAGGGCGACGACGTGACCGCGGGCGTGGTGCCGCCGGTCACCGTCGTC
CTGGACGGCCGCTCCATCTGCCACCGCGTCCACCTCAGCAAGCACACCGGCTACCGCAGC
CTCGCCGCCGCGCTCCGCCGCATGTTCGTCGACGCGGACGACGACGTCGGCGCCGCCGAC
GAGGCAGCTGGCAGGAGCAGCTGCAGCGACGCCGACCGTGGCGGCCTCGACCTGTCCAAT
GCCGTTCCAGGGCACGTCGTCGCGTACGAGGACATCGAGAACGACCTCCTCCTCGCCGGC
GACCTCAACTGGAAGGATTTCGTCCGTGTGGCGAGGAGGATTCGGATCATCCCGGCGAAG
CCATCTAGCCGGATGAGGCCTCAATCTTAA