Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0653200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33314700:33319036:1 gene:Os04g0653200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 3 description:Similar to Low affinity calcium transporter CAX2 (Fragment). (Os04t0653200-01)
Sequence	ATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAAT GGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGCG CTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGGG CCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAGC ATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCAGCTCGCAATA TACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGCAACTGAAATG ATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACAATCATTGCTT GGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGCGGTATT GTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAACTCAGGTTTA CTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCACGCATTCAGAA GTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTATTATGCTTGTG GCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTATAGTCCAATT GGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGGC ATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTATTCTTTCTGAA TACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGTGGCTTTTATC AGTGTTATTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTAGTGCAATAATGTTT GCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATCAACGCAGATA TCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGAC TTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTT ATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTA ATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGA

Peptide Sequence

PEP ID	Os04t0653200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33314700:33319036:1 gene:Os04g0653200 transcript:Os04t0653200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 3 description:Similar to Low affinity calcium transporter CAX2 (Fragment). (Os04t0653200-01)
Sequence	MENPQIEMGAFKANGPQLQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFG PASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEM IIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGL LLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPI GSEEMPNEDAAEEDEESEIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFI SVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMD LNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD

Transcript Sequence

Transcript ID	Os04t0653200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33314700:33319036:1 gene:Os04g0653200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 3 description:Similar to Low affinity calcium transporter CAX2 (Fragment). (Os04t0653200-01)
Sequence	GAGGAGTCGCCAAGACGTCGTAGGCAACACCTCCCTTCCCCCCTACCCTTGAACCGAGGC CGAGTCGTGGTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGC AGCAGGAGGAGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACA GCCTTGGGAGTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTAGGGAAGGGGCGGTGC CGGAGCCCGCGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATT TTTTCAGAGGATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCA ATTGCAGAATGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGT TGAGAGCGCGCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTT GCCGTTTGGGCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTT CCTATTCAGCATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCA GCTCGCAATATACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGC AACTGAAATGATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACA ATCATTGCTTGGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGC TGGCGGTATTGTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAA CTCAGGTTTACTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCAC GCATTCAGAAGTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTAT TATGCTTGTGGCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTA TAGTCCAATTGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATC AGAGATTGGCATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTAT TCTTTCTGAATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGT GGCTTTTATCAGTGTTATTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTAGTGC AATAATGTTTGCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATC AACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCA AAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGT CGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTT GTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGA TTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTACTAATCTTA ATTCTGGTGAGTTGCTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATG TTGACACGGCCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAA TTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTA ATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTC CTTGCATAGTTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCCCGTTCTCTCC