Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0652900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:33258681:33261192:-1 gene:Os04g0652900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase, PTH2 domain containing protein. (Os04t0652900-01)
Sequence

ATGGGCGCCTCGGCCTCCGTCCTCTCCCTTCCCACGGCGGCCGCCATCCCGGGAGCCGCC
ACCGCTATAGCTGGCGCCGCGGGCTGCTTCGCCCTCGGCTACTTCCTCGCCCTCAGCCGC
TTCCCCCGCCAGGTCGTCGCTGCCTCCCCCGCTTCCGGGGAGACCTCGGACGAGGATTCC
GAGGAGGATTCGGAAGAAGATGATGATGACGAAAACTCCGGCCGCAGCCGGGCGGCGAAG
CGGGCGCCCAAGCGCGCCGGGCTCCGGCTGCTGTTCTGGGCGCGCAACGTGGTGACCAAG
TCCGACTCGGCGAAGGAGGCCGAGAGGGCCAAGGCACGGACCGCGGCTAGCCCCCTGGAG
GTCGAGAATCTCGCTGAGATTATAGAGGATTTCAAGATGGTGCTGGTTGTGAGGAATGAT
TTGAAGATGGGGAAGGGGAAGATTGCCGCGCAATGCAGCCATGCAACGTTGGGTCTGTTT
AAAAAACTCCAACAGAGAGCTCCAAAATCATTAAGAAGGTGGGAGAGGTGTGGTCAAGTT
AAGGTGGTCGTGAAAATTGAAAGCGAGGAAGATATGCTTGTTTTACAAGGAAGAGCAAAG
TCTTTGAATATCCCAACACACATAACTATTGATGCTGGAAGAACACAGATCGCACCAAAT
TCAAGAACAGTCATGGCTATTCTTGGGCCAGCTGACATGGTCGATGATGTCACCGGTGGT
CTGAAGCTTCTATAA

Peptide Sequence

PEP ID

Os04t0652900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:33258681:33261192:-1 gene:Os04g0652900 transcript:Os04t0652900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase, PTH2 domain containing protein. (Os04t0652900-01)
Sequence

MGASASVLSLPTAAAIPGAATAIAGAAGCFALGYFLALSRFPRQVVAASPASGETSDEDS
EEDSEEDDDDENSGRSRAAKRAPKRAGLRLLFWARNVVTKSDSAKEAERAKARTAASPLE
VENLAEIIEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLFKKLQQRAPKSLRRWERCGQV
KVVVKIESEEDMLVLQGRAKSLNIPTHITIDAGRTQIAPNSRTVMAILGPADMVDDVTGG
LKLL

Transcript Sequence

Transcript ID

Os04t0652900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33258681:33261192:-1 gene:Os04g0652900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-tRNA hydrolase, PTH2 domain containing protein. (Os04t0652900-01)
Sequence

AGTATCGCGCATCCCCAACCCCAACCCCTCCCCGCCTTGCGCCGCCGCCGCCGCCGCCAC
CGGCGCCGGCGATCCTCCGATGGGCGCCTCGGCCTCCGTCCTCTCCCTTCCCACGGCGGC
CGCCATCCCGGGAGCCGCCACCGCTATAGCTGGCGCCGCGGGCTGCTTCGCCCTCGGCTA
CTTCCTCGCCCTCAGCCGCTTCCCCCGCCAGGTCGTCGCTGCCTCCCCCGCTTCCGGGGA
GACCTCGGACGAGGATTCCGAGGAGGATTCGGAAGAAGATGATGATGACGAAAACTCCGG
CCGCAGCCGGGCGGCGAAGCGGGCGCCCAAGCGCGCCGGGCTCCGGCTGCTGTTCTGGGC
GCGCAACGTGGTGACCAAGTCCGACTCGGCGAAGGAGGCCGAGAGGGCCAAGGCACGGAC
CGCGGCTAGCCCCCTGGAGGTCGAGAATCTCGCTGAGATTATAGAGGATTTCAAGATGGT
GCTGGTTGTGAGGAATGATTTGAAGATGGGGAAGGGGAAGATTGCCGCGCAATGCAGCCA
TGCAACGTTGGGTCTGTTTAAAAAACTCCAACAGAGAGCTCCAAAATCATTAAGAAGGTG
GGAGAGGTGTGGTCAAGTTAAGGTGGTCGTGAAAATTGAAAGCGAGGAAGATATGCTTGT
TTTACAAGGAAGAGCAAAGTCTTTGAATATCCCAACACACATAACTATTGATGCTGGAAG
AACACAGATCGCACCAAATTCAAGAACAGTCATGGCTATTCTTGGGCCAGCTGACATGGT
CGATGATGTCACCGGTGGTCTGAAGCTTCTATAAATTCTTGTTCTCGGTATCCTCAGACA
TAGGAATTTGAAGACAAACGCTTAAATTTGACAAACCACATTGGCTGCTGAAGAACGAAC
CCTGAAACTCATCGGCTCACTCAATCTTGTTGTTCGAGTATTTACCAGTGAAGAGGCTTA
ATTTCACTTTTACTTGTATGAACTGTCTTCGGAGCAATGGTTTTTTCTTTCTTCAGTTTT
CCACTCTGCATTTGTTGCTGTGGACGTCTGAACTCTTAAATTTTTCTGTAACATATTAGA
TAACAAAAGGGTAAAAGACTTCCTACTTATCTT