Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0652700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33253920:33256572:1 gene:Os04g0652700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease PA3. (Os04t0652700-01);Similar to nuclease PA3. (Os04t0652700-02)
Sequence	ATGGCCGCGCGCGTGCTCCCCCTCCTCCTCGTCGTCGTCGTCGCCGCGGCCATGGCGAGA GCCCCCACGGCCCACGCGTGGGGCAAGGAGGGCCACTACATGGTGTGCAAGATCGCCGAG GGTTTCCTGACGAAGGAGGCGGCGACGGCGGTGAAGGAGCTCCTCCCCGGGTGGGCCGGC GGCGAGCTCGCGGAAACGTGCTCGTGGGCGGACACCGAGCGGTTCCGGTACCGGTGGTCG AGCCCCCTCCACTTCGCCGACACCCCCGGCGACTGCCAGTTCAACTACGCCCGGGATTGC CACAACACAAACGGTGAGAAGGACATGTGTGTGGTCGGAGCGATCAACAACTACACCAAC GCGCTCGAGGACTCATCAAGTCCATATGATCCAACCGAGAGCTTGATGTTCTTGGCACAC TTCGTCGGCGACGTTCACCAGCCTCTCCACTGCGGCCACGTCAAAGATCTTGGTGGCAAC ACCATCATCGTCCATTGGTACACAAGGAAGAGCAACCTTCATCACGTGTGGGATGTGAAC GTCATTGAAACGGCCTTGAAGGAATTCTACAACGAGGACGTGAGCACGATGATAAAGGCC ATCAAGATGAACATCACTGATGAGTGGTCCACCGAGGAGAAGCAGTGGGAGACTTGCCGT AGCCGGACAAAGACTTGTGCCGATAAGTACGCCGAGGAGAGTGCAAAGCTCGCGTGCAAA GCGTACGAGGGTGTTGAGCAAGAATCCACCTTAGAAGATGACTATTTCTTCGCTGCCCTG CCTGTTGTTCAGAAGAGGATTGCTCAAGGTGGCGTGAGGCTTGCTGCAATACTCAACCGG ATCTTCAGCGGGAACAAGGTTCAGAGTAGTTGA

Peptide Sequence

PEP ID	Os04t0652700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33253920:33256572:1 gene:Os04g0652700 transcript:Os04t0652700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease PA3. (Os04t0652700-01);Similar to nuclease PA3. (Os04t0652700-02)
Sequence	MAARVLPLLLVVVVAAAMARAPTAHAWGKEGHYMVCKIAEGFLTKEAATAVKELLPGWAG GELAETCSWADTERFRYRWSSPLHFADTPGDCQFNYARDCHNTNGEKDMCVVGAINNYTN ALEDSSSPYDPTESLMFLAHFVGDVHQPLHCGHVKDLGGNTIIVHWYTRKSNLHHVWDVN VIETALKEFYNEDVSTMIKAIKMNITDEWSTEEKQWETCRSRTKTCADKYAEESAKLACK AYEGVEQESTLEDDYFFAALPVVQKRIAQGGVRLAAILNRIFSGNKVQSS

Transcript Sequence

Transcript ID	Os04t0652700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33253920:33256572:1 gene:Os04g0652700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nuclease PA3. (Os04t0652700-01);Similar to nuclease PA3. (Os04t0652700-02)
Sequence	AAACAGAGCAGAGAAGCAGAGCAACCATGGCCGCGCGCGTGCTCCCCCTCCTCCTCGTCG TCGTCGTCGCCGCGGCCATGGCGAGAGCCCCCACGGCCCACGCGTGGGGCAAGGAGGGCC ACTACATGGTGTGCAAGATCGCCGAGGGTTTCCTGACGAAGGAGGCGGCGACGGCGGTGA AGGAGCTCCTCCCCGGGTGGGCCGGCGGCGAGCTCGCGGAAACGTGCTCGTGGGCGGACA CCGAGCGGTTCCGGTACCGGTGGTCGAGCCCCCTCCACTTCGCCGACACCCCCGGCGACT GCCAGTTCAACTACGCCCGGGATTGCCACAACACAAACGGTGAGAAGGACATGTGTGTGG TCGGAGCGATCAACAACTACACCAACGCGCTCGAGGACTCATCAAGTCCATATGATCCAA CCGAGAGCTTGATGTTCTTGGCACACTTCGTCGGCGACGTTCACCAGCCTCTCCACTGCG GCCACGTCAAAGATCTTGGTGGCAACACCATCATCGTCCATTGGTACACAAGGAAGAGCA ACCTTCATCACGTGTGGGATGTGAACGTCATTGAAACGGCCTTGAAGGAATTCTACAACG AGGACGTGAGCACGATGATAAAGGCCATCAAGATGAACATCACTGATGAGTGGTCCACCG AGGAGAAGCAGTGGGAGACTTGCCGTAGCCGGACAAAGACTTGTGCCGATAAGTACGCCG AGGAGAGTGCAAAGCTCGCGTGCAAAGCGTACGAGGGTGTTGAGCAAGAATCCACCTTAG AAGATGACTATTTCTTCGCTGCCCTGCCTGTTGTTCAGAAGAGGATTGCTCAAGGTGGCG TGAGGCTTGCTGCAATACTCAACCGGATCTTCAGCGGGAACAAGGTTCAGAGTAGTTGAT CCAATAGAGATTAAACAGATGAAAGATTAAGAAAATAGCCCGCATTCTGAATTACAATAA GATTATCTTGTTTGACCATGTTAACTTCACGGTTACGATTAGATGTATCCTCATTTAGCC ATTTGTCAAAGTAGCTTAGATAGCTACAGAACATTGTAATTCCTGTAAGCAAGTGGTGAT TTATCAATATTGCACTGTCTTTTTGTATCATTGATCATCTTTCAGGCTGAAGTTAAGCTA CAGCCG