Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0650500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:33147439:33150039:1 gene:Os04g0650500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0212B02.11 protein. (Os04t0650500-01)
Sequence

ATGGAGATGACCAGAAGCCTTACGCTCGTGCCGCTCCCGGCGACGCTCCGGCCGGCATCC
GCGGCCTGTCGCCGGCGGCGGAGGCGGCGAGGGCTTCCCTTCGGTGCACTCTTCTCACCA
TCGCCTCCTTCGAACCAGCAGCAGCAGGAAATGCACATCAGGGCGCTGCAGCCGCGGCAG
GATTGGGTGGGGGAGTGGGTCCGGAGCAACGACACGCTAGTCCGCGGCCTGCCCATCCTC
GGCGGCGGCGCCTCCCTGCTCGCCGTCCTCCTCAACCGTGCGGTTTCCGGCATTGCAGCT
GTCGCCGACGCCTCCAGTTCGCAGTCAAGGGCTGACATACTGACTCTTGCTCTCTCCGTA
ACTGATATTCTTGCTGGCCTTGTTTGGTTGTCCATCCGGCCGAAATCCATTTCTCCTGTT
GTTCCTCGAGGTGTCGAGTGCAAACGGGTAGGAACGGGTGTATTGGACTCGGCTCTTCGT
GAACTACTTTGGACATGGGATTCCCTTACAACTGCAACTTGTTGCAAATCCTTGGTTGTT
GTGTATGGAGGTAATTGTGTTCTTCAAATTGGGGTTGCTGCTGGCTCTCCAGAGGATGGT
AATGCAGTTATGGTGGATGCACAGAAGTTCATGCAAGGTTCCCTTTATAGAAGTGCCATG
GAATCCAAGAAGCAATCTTACCTAGCAAATCTTGCCTTATATCCTGGAAGGACTGAACTA
CCATTCTTGCCAGCTAACACGCAGGCCCTAATATTGCAACCAATTGGTGATAAAGGAATT
GCAGTTATTGGTGGTGACACTATAAGGGGGTTCACTAATCTTGATCAGGCATGGATTGCA
ATGATAGCAGATAAACTGGATGCTACATTGTCAAAGTCGTAA

Peptide Sequence

PEP ID

Os04t0650500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:33147439:33150039:1 gene:Os04g0650500 transcript:Os04t0650500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0212B02.11 protein. (Os04t0650500-01)
Sequence

MEMTRSLTLVPLPATLRPASAACRRRRRRRGLPFGALFSPSPPSNQQQQEMHIRALQPRQ
DWVGEWVRSNDTLVRGLPILGGGASLLAVLLNRAVSGIAAVADASSSQSRADILTLALSV
TDILAGLVWLSIRPKSISPVVPRGVECKRVGTGVLDSALRELLWTWDSLTTATCCKSLVV
VYGGNCVLQIGVAAGSPEDGNAVMVDAQKFMQGSLYRSAMESKKQSYLANLALYPGRTEL
PFLPANTQALILQPIGDKGIAVIGGDTIRGFTNLDQAWIAMIADKLDATLSKS

Transcript Sequence

Transcript ID

Os04t0650500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:33147439:33150039:1 gene:Os04g0650500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0212B02.11 protein. (Os04t0650500-01)
Sequence

ACATCTCGCGCGCGGCCTCCGGTCGTCGTCGCGACTCCGCTGCCGCCGTCGCCCGGCGCC
GCCGGTGATCCCGCTCATGTGCTAGTAGAAGGCGTTCGGAGCTCTTTGGGAGTGTCGCAC
GCATGGAGATGACCAGAAGCCTTACGCTCGTGCCGCTCCCGGCGACGCTCCGGCCGGCAT
CCGCGGCCTGTCGCCGGCGGCGGAGGCGGCGAGGGCTTCCCTTCGGTGCACTCTTCTCAC
CATCGCCTCCTTCGAACCAGCAGCAGCAGGAAATGCACATCAGGGCGCTGCAGCCGCGGC
AGGATTGGGTGGGGGAGTGGGTCCGGAGCAACGACACGCTAGTCCGCGGCCTGCCCATCC
TCGGCGGCGGCGCCTCCCTGCTCGCCGTCCTCCTCAACCGTGCGGTTTCCGGCATTGCAG
CTGTCGCCGACGCCTCCAGTTCGCAGTCAAGGGCTGACATACTGACTCTTGCTCTCTCCG
TAACTGATATTCTTGCTGGCCTTGTTTGGTTGTCCATCCGGCCGAAATCCATTTCTCCTG
TTGTTCCTCGAGGTGTCGAGTGCAAACGGGTAGGAACGGGTGTATTGGACTCGGCTCTTC
GTGAACTACTTTGGACATGGGATTCCCTTACAACTGCAACTTGTTGCAAATCCTTGGTTG
TTGTGTATGGAGGTAATTGTGTTCTTCAAATTGGGGTTGCTGCTGGCTCTCCAGAGGATG
GTAATGCAGTTATGGTGGATGCACAGAAGTTCATGCAAGGTTCCCTTTATAGAAGTGCCA
TGGAATCCAAGAAGCAATCTTACCTAGCAAATCTTGCCTTATATCCTGGAAGGACTGAAC
TACCATTCTTGCCAGCTAACACGCAGGCCCTAATATTGCAACCAATTGGTGATAAAGGAA
TTGCAGTTATTGGTGGTGACACTATAAGGGGGTTCACTAATCTTGATCAGGCATGGATTG
CAATGATAGCAGATAAACTGGATGCTACATTGTCAAAGTCGTAAGAACGCGTAGTTTGTT
GGATATTGTTTGTATCTTGCAATTGGCCAAACTGTCACGAGAGATGATCATCTGTCACTG
TACATGTTCAAGTTACAGGTAGAGTTTGCAAAACCAACGGATAAAACAGTACAGGGCTGG
GGTTGACCAATTGTTTTAAGCCAGGCTGTATGATTAGGCTTGATTAAGTTTGACCAGCAT
GAATTGATTACAATGTTAGTTACTTCTTGTAACCAGTCACTGTTGGCTGAATGAATCACA
TTACTGATGCTTTCATTTGTAAGATCTCATCACATTTC