Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0649100-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:33071970:33074598:1 gene:Os04g0649100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHATTERING ABORTION 1 description:Similar to cDNA clone:J023121E19, full insert sequence. (Os04t0649100-01);Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os04t0649100-02);APETALA2 transcription factor, Seed shattering through abscission zone (AZ) development (Os04t0649100-03)
Sequence	ATGTGGGACCTCAATGACTCGCCGGCGGCCGAGGCCGCGCCGCCGCCGCTGTCGCCGTCC GCCGACGACTCCGGCGCCTCCTCGTCCTCGGCCGCCGCCGTCGTCGAGATACCCGACGAC GCCGACGACGACTCGGCCGCTGTGGTTGTCGTCACGCGCCAGTTCTTCCCTCCGGCCGTC CCGGGCGGCGGCGGCGACCCCGCCCCCGGGAACGCGCGCGCCGGGTGGCTCCGCCTGGCC GGAGCCGCCCCGCCGGTCGCTGCAACGGGGCCGGCGGCGTCGGCGGCGGTGTCCAAGAAG AGCCGGCGCGGGCCGCGGTCGCGCAGCTCGCAGTACCGCGGCGTCACGTTCTACCGCCGC ACCGGGCGATGGGAATCGCACATATGGGATTGTGGCAAGCAGGTCTATTTGGGCGGATTT GACACTGCTCATGCGGCGGCTCGGGCGTACGATCGGGCGGCGATCAAGTTCCGCGGCGTG GAGGCCGACATCAATTTCAGCTTGGAGGATTACGAGGATGACCTGAAGCAGATGAGCAAC CTGACCAAGGAGGAGTTCGTCCACGTGCTCCGGCGGCAGAGCACGGGGTTCCCCCGGGGA AGCTCCAAGTACAGGGGCGTGACGCTCCACAAGTGCGGGAGATGGGAGGCTCGGATGGGC CAATTCCTCGGCAAGAAGTACGTCTACTTGGGGCTGTTCGACACCGAGGAGGAAGCTGCC AGGGCGTACGACCGCGCTGCCATCAAGTGCAATGGCAAGGATGCGGTGACGAACTTCGAT CCAAGCATTTACGCCGGGGAGTTCGAGCCGCCGGCAGCGGCCACGGGTGATGCCGCCGAG CACAACCTGGACCTCTCGCTTGGGAGCTCGGCGGGCTCCAAGAGGGGCAACGTTGACGGT GGCGGGGACGACGAGATCACCGGCGGCGGTGGCGGTGGCGCGGGCTCCGACCAGCGCGTC CCTATGGCGTTCGACCTTGACTGGCAAACGGCGGCGGCGAGGAGCACCAAAGCTAAGTTC GACCAGAACTCGAACCATCCCCAGATGCCTCCGGTCCTGCAGGTCACCCACCTGCCATTC AGTCCCAGGCATCATCACCAATTCTTGAGCAATGGTGATCCGGGGACAGCGGGAGGCCTG TCACTGACGATCGGCGCAGGCATGGCCGGGCACTGGCCTCCCCAGCAGCAGCAGGGGTGG GGCAACGCCGGCGGCATGAGCTGGCCGCACCCGCCGCACCCGCCGCCGCCGCCGACCAAC GCCGCGGCCGCCGCAACCGCTACAGCAGCTGCAGCATCATCACGATTCCCTCCCTACATT GCGACGCAAGCCTCAACCTGGCTGCAGAAGAACGGGTTCCATTCCCTGACCCGGCCCACC TAA

Peptide Sequence

PEP ID	Os04t0649100-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:33071970:33074598:1 gene:Os04g0649100 transcript:Os04t0649100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHATTERING ABORTION 1 description:Similar to cDNA clone:J023121E19, full insert sequence. (Os04t0649100-01);Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os04t0649100-02);APETALA2 transcription factor, Seed shattering through abscission zone (AZ) development (Os04t0649100-03)
Sequence	MWDLNDSPAAEAAPPPLSPSADDSGASSSSAAAVVEIPDDADDDSAAVVVVTRQFFPPAV PGGGGDPAPGNARAGWLRLAGAAPPVAATGPAASAAVSKKSRRGPRSRSSQYRGVTFYRR TGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSLEDYEDDLKQMSN LTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEEEAA RAYDRAAIKCNGKDAVTNFDPSIYAGEFEPPAAATGDAAEHNLDLSLGSSAGSKRGNVDG GGDDEITGGGGGGAGSDQRVPMAFDLDWQTAAARSTKAKFDQNSNHPQMPPVLQVTHLPF SPRHHHQFLSNGDPGTAGGLSLTIGAGMAGHWPPQQQQGWGNAGGMSWPHPPHPPPPPTN AAAAATATAAAASSRFPPYIATQASTWLQKNGFHSLTRPT

Transcript Sequence

Transcript ID	Os04t0649100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33071970:33074598:1 gene:Os04g0649100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHATTERING ABORTION 1 description:Similar to cDNA clone:J023121E19, full insert sequence. (Os04t0649100-01);Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os04t0649100-02);APETALA2 transcription factor, Seed shattering through abscission zone (AZ) development (Os04t0649100-03)
Sequence	ATGTGGGACCTCAATGACTCGCCGGCGGCCGAGGCCGCGCCGCCGCCGCTGTCGCCGTCC GCCGACGACTCCGGCGCCTCCTCGTCCTCGGCCGCCGCCGTCGTCGAGATACCCGACGAC GCCGACGACGACTCGGCCGCTGTGGTTGTCGTCACGCGCCAGTTCTTCCCTCCGGCCGTC CCGGGCGGCGGCGGCGACCCCGCCCCCGGGAACGCGCGCGCCGGGTGGCTCCGCCTGGCC GGAGCCGCCCCGCCGGTCGCTGCAACGGGGCCGGCGGCGTCGGCGGCGGTGTCCAAGAAG AGCCGGCGCGGGCCGCGGTCGCGCAGCTCGCAGTACCGCGGCGTCACGTTCTACCGCCGC ACCGGGCGATGGGAATCGCACATATGGGATTGTGGCAAGCAGGTCTATTTGGGCGGATTT GACACTGCTCATGCGGCGGCTCGGGCGTACGATCGGGCGGCGATCAAGTTCCGCGGCGTG GAGGCCGACATCAATTTCAGCTTGGAGGATTACGAGGATGACCTGAAGCAGATGAGCAAC CTGACCAAGGAGGAGTTCGTCCACGTGCTCCGGCGGCAGAGCACGGGGTTCCCCCGGGGA AGCTCCAAGTACAGGGGCGTGACGCTCCACAAGTGCGGGAGATGGGAGGCTCGGATGGGC CAATTCCTCGGCAAGAAGTACGTCTACTTGGGGCTGTTCGACACCGAGGAGGAAGCTGCC AGGGCGTACGACCGCGCTGCCATCAAGTGCAATGGCAAGGATGCGGTGACGAACTTCGAT CCAAGCATTTACGCCGGGGAGTTCGAGCCGCCGGCAGCGGCCACGGGTGATGCCGCCGAG CACAACCTGGACCTCTCGCTTGGGAGCTCGGCGGGCTCCAAGAGGGGCAACGTTGACGGT GGCGGGGACGACGAGATCACCGGCGGCGGTGGCGGTGGCGCGGGCTCCGACCAGCGCGTC CCTATGGCGTTCGACCTTGACTGGCAAACGGCGGCGGCGAGGAGCACCAAAGCTAAGTTC GACCAGAACTCGAACCATCCCCAGATGCCTCCGGTCCTGCAGGTCACCCACCTGCCATTC AGTCCCAGGCATCATCACCAATTCTTGAGCAATGGTGATCCGGGGACAGCGGGAGGCCTG TCACTGACGATCGGCGCAGGCATGGCCGGGCACTGGCCTCCCCAGCAGCAGCAGGGGTGG GGCAACGCCGGCGGCATGAGCTGGCCGCACCCGCCGCACCCGCCGCCGCCGCCGACCAAC GCCGCGGCCGCCGCAACCGCTACAGCAGCTGCAGCATCATCACGATTCCCTCCCTACATT GCGACGCAAGCCTCAACCTGGCTGCAGAAGAACGGGTTCCATTCCCTGACCCGGCCCACC TAA