Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0648700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:33006324:33012909:1 gene:Os04g0648700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EME1 description:DNA repair nuclease, XPF-type/Helicase domain containing protein. (Os04t0648700-01)
Sequence	ATGGCGTCCCACGCCGCCGTCGTCGAGATCATCGACGACGACGACGACGACGACGACGAC GTCGCCGCCGCCTCCACCCCTCCCGCCCTCCACAAGCGCTCCCATGCGGTCGCCGCCGCC GCCCCCGATTCCCCCGACGCCTTCTCCCCTTCCCCTCCAGACCCGAAGCGGCGGCAGCTC GCGGCGTCAACCATCGTGCTCGACGACACCCCCACCCCTCCGAAGCGGCGGCCGCCGCCG GTAGCTGCCGACCGGTCCGCCTCCGTGGTGGCAGATACGCCCCGGTCGTTCGTGCCGTGC TCGCTCCGCAACCGCGCCATTGCTGGTGATACGCCCGATTCTGTTCTCCCGAGCCCGTCG TTCCACCTCGACGCTCCCGATTCCGCGACCCCTGGCTCGGATGTCCCGTGCTCCGTCGGG CTTGACGACATTGTTCCTGAGACCCCGGGCTTCAACTCCCCACGCTTGGCTCGTCCCCCG GCCGTGCCTGGCTTGACGTCTCCTATGACCGCGAGGAAATTTTCTGGAGTATCTTGTCCA ATATCTCTGGATAGTGATGACGAATTGGATGACACTGTATACAGGGAGTCTTTAACCAGG ACGCCAAGCAATATGGCGAAGCCAGAACACGCAATTCAGCCTTGTACTACTTCCTGTACT GATAAAGTTGAGAATACAAAAAGTACAGATAAGAAGGATTATTCAAAATCAAATGTTGGA TATCAAACAAACAATTCTGCATGCAAAAATAATGGAACAACCAGCTACAATCAACCCCCT CGTGCTAATTCTCCTTGTGAAGATTCTACCTTGAAGGAGGCTGATCCTTTTATCAATAAC CATTGTCCGCAGGAAGAAAATGCCCTACCGATTGAAGAAAGGAAGAAGAAACAACAGGAA GAGAAGAGACTAAAGAAGGAAAAGAAAGCCAGAGAAATCGAAGAAAAAAAACAAAAACGA CTGGAAACCAAAAAGCAAAAGGAAGCTATGAAAGCTGAACTAGCAGAATTGAAGAAGCTG GAGAAAGAAAAAAAGAAGTGGGAATCAGGGAAGTTAGCTACAAAATGTATTGTTGCTGAG ATTGACTCAAGTGTTATTGAAAGTGGCTCAGTTGGAGGTCATCTTGTGCAAGGATTTCAT GAGAAGGGCCTTTGTTTTCGAGTAACATCTAATTCAATCAAGGGGTCAATTTTATGGAAG ATGCAAATTCCTAATGAGTTTACCCAGGACCAAGCTTCAACATCACAAGTGCCATATATT CTCTTTGTGCTTCAAGCTGAGGAATTCTGCGATCTTGTAAGTGGTGGTACATTACTGGAT CATGTTCAGAAAGTTCGAAGACAGTATCCAGAATTCACAATTTGCTACGTTACTAATAAA CTGATGAGCTTCATAAAAAGACGTGAGCAGAATCAGTACAACAAGACCACATCAAATTCT AATAGTTGGAAGCGTCCACCAGTGGAAGAGGCCTTATGCAAATTAGCGACACACTATGCT AGAGTGCGCTCAAGGCACTGCACAGATGAAGCTGAAGTGACAGAGCATATTGTTGGCTTG ACATATAGTCTTGCGAATTGCAAGTTCAGGAAACCATTGACATGGTTATCTGTGCATGCT AATGGTTCAAATATTTCTAAAGGTTGCGTTGATAAAGATCGGATTAAGAAAAGTGCCTGG CTGAAGTCTTTAGTTGCTATTCCCGGAGTCAGTCCAGGACAAGCTATTGCAATTGAGAAG AAGTACCCGTCCATGAGATCACTACTGAATGTGTATATGGATGACAGTAAATCTGTTCAT GAAAAAGAACATTTGCTTGAAGACTTGAGGTTGGAAGGTCCTCTGGGTGATTTTAAGAGA AGGCTCGGACCAGCATGCTCTAAAAAAGTGTACACAATTCTCATGGCACAAAATGGAGCG GCAGAAGTGGAAGTTGATAGGCGTGGAGCTTAG

Peptide Sequence

PEP ID	Os04t0648700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:33006324:33012909:1 gene:Os04g0648700 transcript:Os04t0648700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EME1 description:DNA repair nuclease, XPF-type/Helicase domain containing protein. (Os04t0648700-01)
Sequence	MASHAAVVEIIDDDDDDDDDVAAASTPPALHKRSHAVAAAAPDSPDAFSPSPPDPKRRQL AASTIVLDDTPTPPKRRPPPVAADRSASVVADTPRSFVPCSLRNRAIAGDTPDSVLPSPS FHLDAPDSATPGSDVPCSVGLDDIVPETPGFNSPRLARPPAVPGLTSPMTARKFSGVSCP ISLDSDDELDDTVYRESLTRTPSNMAKPEHAIQPCTTSCTDKVENTKSTDKKDYSKSNVG YQTNNSACKNNGTTSYNQPPRANSPCEDSTLKEADPFINNHCPQEENALPIEERKKKQQE EKRLKKEKKAREIEEKKQKRLETKKQKEAMKAELAELKKLEKEKKKWESGKLATKCIVAE IDSSVIESGSVGGHLVQGFHEKGLCFRVTSNSIKGSILWKMQIPNEFTQDQASTSQVPYI LFVLQAEEFCDLVSGGTLLDHVQKVRRQYPEFTICYVTNKLMSFIKRREQNQYNKTTSNS NSWKRPPVEEALCKLATHYARVRSRHCTDEAEVTEHIVGLTYSLANCKFRKPLTWLSVHA NGSNISKGCVDKDRIKKSAWLKSLVAIPGVSPGQAIAIEKKYPSMRSLLNVYMDDSKSVH EKEHLLEDLRLEGPLGDFKRRLGPACSKKVYTILMAQNGAAEVEVDRRGA

Transcript Sequence

Transcript ID	Os04t0648700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:33006324:33012909:1 gene:Os04g0648700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EME1 description:DNA repair nuclease, XPF-type/Helicase domain containing protein. (Os04t0648700-01)
Sequence	AGCCGAGCCGACCACCATTNGTCGGAACCCTAACCCGCCAAAACCCAAAATCAAAATCGC CATCTCGGCGAAGAAATCCCCAAATCCACCGGCGAAGCCCCACCAAACCGATGGCGTCCC ACGCCGCCGTCGTCGAGATCATCGACGACGACGACGACGACGACGACGACGTCGCCGCCG CCTCCACCCCTCCCGCCCTCCACAAGCGCTCCCATGCGGTCGCCGCCGCCGCCCCCGATT CCCCCGACGCCTTCTCCCCTTCCCCTCCAGACCCGAAGCGGCGGCAGCTCGCGGCGTCAA CCATCGTGCTCGACGACACCCCCACCCCTCCGAAGCGGCGGCCGCCGCCGGTAGCTGCCG ACCGGTCCGCCTCCGTGGTGGCAGATACGCCCCGGTCGTTCGTGCCGTGCTCGCTCCGCA ACCGCGCCATTGCTGGTGATACGCCCGATTCTGTTCTCCCGAGCCCGTCGTTCCACCTCG ACGCTCCCGATTCCGCGACCCCTGGCTCGGATGTCCCGTGCTCCGTCGGGCTTGACGACA TTGTTCCTGAGACCCCGGGCTTCAACTCCCCACGCTTGGCTCGTCCCCCGGCCGTGCCTG GCTTGACGTCTCCTATGACCGCGAGGAAATTTTCTGGAGTATCTTGTCCAATATCTCTGG ATAGTGATGACGAATTGGATGACACTGTATACAGGGAGTCTTTAACCAGGACGCCAAGCA ATATGGCGAAGCCAGAACACGCAATTCAGCCTTGTACTACTTCCTGTACTGATAAAGTTG AGAATACAAAAAGTACAGATAAGAAGGATTATTCAAAATCAAATGTTGGATATCAAACAA ACAATTCTGCATGCAAAAATAATGGAACAACCAGCTACAATCAACCCCCTCGTGCTAATT CTCCTTGTGAAGATTCTACCTTGAAGGAGGCTGATCCTTTTATCAATAACCATTGTCCGC AGGAAGAAAATGCCCTACCGATTGAAGAAAGGAAGAAGAAACAACAGGAAGAGAAGAGAC TAAAGAAGGAAAAGAAAGCCAGAGAAATCGAAGAAAAAAAACAAAAACGACTGGAAACCA AAAAGCAAAAGGAAGCTATGAAAGCTGAACTAGCAGAATTGAAGAAGCTGGAGAAAGAAA AAAAGAAGTGGGAATCAGGGAAGTTAGCTACAAAATGTATTGTTGCTGAGATTGACTCAA GTGTTATTGAAAGTGGCTCAGTTGGAGGTCATCTTGTGCAAGGATTTCATGAGAAGGGCC TTTGTTTTCGAGTAACATCTAATTCAATCAAGGGGTCAATTTTATGGAAGATGCAAATTC CTAATGAGTTTACCCAGGACCAAGCTTCAACATCACAAGTGCCATATATTCTCTTTGTGC TTCAAGCTGAGGAATTCTGCGATCTTGTAAGTGGTGGTACATTACTGGATCATGTTCAGA AAGTTCGAAGACAGTATCCAGAATTCACAATTTGCTACGTTACTAATAAACTGATGAGCT TCATAAAAAGACGTGAGCAGAATCAGTACAACAAGACCACATCAAATTCTAATAGTTGGA AGCGTCCACCAGTGGAAGAGGCCTTATGCAAATTAGCGACACACTATGCTAGAGTGCGCT CAAGGCACTGCACAGATGAAGCTGAAGTGACAGAGCATATTGTTGGCTTGACATATAGTC TTGCGAATTGCAAGTTCAGGAAACCATTGACATGGTTATCTGTGCATGCTAATGGTTCAA ATATTTCTAAAGGTTGCGTTGATAAAGATCGGATTAAGAAAAGTGCCTGGCTGAAGTCTT TAGTTGCTATTCCCGGAGTCAGTCCAGGACAAGCTATTGCAATTGAGAAGAAGTACCCGT CCATGAGATCACTACTGAATGTGTATATGGATGACAGTAAATCTGTTCATGAAAAAGAAC ATTTGCTTGAAGACTTGAGGTTGGAAGGTCCTCTGGGTGATTTTAAGAGAAGGCTCGGAC CAGCATGCTCTAAAAAAGTGTACACAATTCTCATGGCACAAAATGGAGCGGCAGAAGTGG AAGTTGATAGGCGTGGAGCTTAGCTTAGCCTTCCATGCTCACATCGTCCTAAATCATGAA AGGTCGATTTTGTATTTATGGCCCTTTTGTCCATATTGTTTAGATGAAGCTTCAAGGTAG TTAATGTGATGTTCTTGGTGCTGAAGCCATTACTTGTTATGGCTGGCACTTTAATGTGCT CTCTACCCATCGATAAAAATGAAATTATCGTAAACTGAAGACATGACACAACTTCTGCTA GATATCTGGATGATAGGCTGTGATACCCTATTCTGTGTGATAGCAACACGATAGGTCCCA GCAATTTTGCAACTTTTGTAAAGTTCGTGACTATTGAGAAAGGTTCAAGTAAATAGGTTG GTACTGGAACCTAAAAAACATATTGAACGGCACTGCATTTGTGCGTGTCGGCAGTGTAAT GTATGGTACCTTAAGGCGC