Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0647900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:32963581:32967002:1 gene:Os04g0647900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0647900-01)
Sequence	ATGAGCGCAGGAGAAGACGGAGTTTATTTCAGGATGAGATTCTTCTTCTTCTTCTTCTTG GTTGTGCTATGCTTGCTAGATTCCAATATCTCCACGTCCCATGGCTGCTTCGTGGAGGAG AGGACGGCGCTGATGGACATTGGCTCCTCTCTGACGCGCTCAAACGGCACGGTGCCGCCA TCATGGGGGCGCGGCGACGGTGACGACGACTGCTGCTTGTGGGAGCGCGTCAAATGCAGC AACATCACTGGGCGAGTATCACATCTCTACTTCTCAAACCTGTATGATTCTCTGGAAGTG CTAAATGCACATGGTGACTCGTTTTGGCGTTTCAACACGACGGTCTTCTCCTCATTCCCG GAGCTTCAGTTCCTGGATCTGTCCAGTATCTATCCCAGTTCTCTAAATATCGATGGCTTG GTAGGGCTGAAGCTGCCCAAGCTACAGCATCTCAACCTCAGTTATAACTGGTTGCAAGAG AGTATCCTCGCAGATCTTGGGGAACTGGTTTCGCTTGAAGTCCTAGATGCCAGCTCCAAC GCCATGAGTGGAGTTGTTCCCACTGCAGTTTTAAAAAATCTTACGAATCTGAAGGAGCTG AATTTGAGTGCCAACGGATTCAGCGGAAGCCTTCCGGGGTCATTACTTGAACTACCTCAC CTTGATCCCTCAGGAAGTTCGTTAGCAGGACGTACTCCAATTAATTCATCTTTGGAGCCA GTTTCACTACAAGTATTAAATCTCAACAACAACAGGATGAGTGGAGCTCTTCCAACCGAA CGAGCATTCGGATATCTAAGGAACCTACGAGAATTGCATTTGAGTTCCAATAACTTCACT GGAAACATTTCTACTTTCTTGCTTTCACTTCCACATATTGAACGATTGGATCTCTCGGGA AATACTTTTGAAGGACCTATCCCTATAACTCCATCTTCAAATCTTTCTCTGTCTCTCAAA GGTCTTCGGTTTTCCCAGAACAATCTGAGTGGTAAACTCTCATTTTTTTGGCTGAGGAAC CTCACTAAACTTGAAGAAATCAACTTGTCAGGGAATATTAATTTAGCAGTTGATGTCAAT ATTCCTGGATGGGCACCTCCATTCCAACTGAAACAGTTAGCTCTCTCTGGTTGTGGTCTT GACAAAGGCATAATTGCAGAACCACACTTTCTACGCACACAACATCATTTGCAGGAGCTT GACTTGTCAAACAATAACTTGTCAGGAAGAATGCCGAATTGGCTTTTTACAAAAGAAGCA ACTCTGGTTAACCTAAACCTTGGAAATAACTCGCTAACTGGATCTCTAAGTCCCATATGG CACCCCCAAACAGCTCTACAATCTATTGTTATATCTACCAACCGTATTACAGGGAAGCTA CCTGCCAACTTCAGCGCAATATTTCCAAGCTTGTCCACTCTGGATTTGTCAGACAATAAC TTTCATGGAGAAATTCCGATGTCACTGTGCAGCATCAAACACATGAAGGACTTGAGCTTA TCAAACAATAATTTTTCTGGTAAAATGCCGACTTGTGTGTTCACTGATTTTCTTGAGCTG TGGACCTTGAGTGCCTCAAACAACCAGCTTGGAGGTCTGGTGTTTGGTGGGATGAAAAAA CTGTCCATCGGGTTTGCAATGCACCTACAGAACAACAAATTTGAAGGAACACTGCCTCGT AATCTGTCAGGAGCACTAGTAATCATGGATTTGCATGATAACAGCCTGTCCGGTGAACTT GACACCTCATTTTGGAATCTGTCTAAATTGCAGGTACTAGATCTTTCTGGGAACCATATA ACTGGCAGTATCCCTCAAAAAATTTGCAGCTTGGCAAGCATTGAAATTTTAGATCTTTCA AACAACAACTTATCAGGATCTATACCAAGATGTGCCAGTGCATCTCTAAGTTCGCTTAAT CTGTATGGGAATTCATTATCAGGAAACATCTCGGATGATCTTTTCAACACATCAAATCTT ATGTATTTGGATATGAGACATAATAAGTTGACTGGTAACCTCAATTGGTTACGGCATCTT GATAAAATCAAGACACTTTCATTGGGATGGAATGACTTTGAAGGCCAAATCACTCCAAAC TTGTGTAAACTAAAGTGCCCAAGGATAATCGACTTCTCACACAACAAACTCTCAGGCTCA CTGCCACCATGTGTTGGCAACATCTCTTGTGAGAGTGATACGGCAGCTCAAAATTATTCA CCATTGCTACTTATTTATGTTATAATAGAGGCTTACATAATTGTTCATGACCCAATAGAC TTCACCTTTGCTACAAAAGGGGGACAATATACATATGGTTACAACTTCTTCGATCTGATG TCTGGTATCGACTTATCCGGGAATATGCTGTCAGGAGAAATTCCATGGGAGCTTGGGAAT CTGAGCCATATCAAATCCCTCAACCTGTCCAACAATTTCTTCACTGGTCAAATCCCAGCA AGCTTTGCAAACATGAGCGAGATTGAAAGCTTGGACCTTTCCCACAATGAACTGAGTGGA TTGATTCCATGGCAGCTGACCAAATTATCGTCATTAGCGGTGTTCTCTGTGGCATATAAC AACTTATCAGGATGTATTCCAAACTCTGGTCAGTTCGGCACGTACGGTATGGATAGCTAC CAAGGCAACAGTAATCTTCGGAGTATGTCAAAGGGAAACATATGCTCTCCAGATTCAGGA GCAGGTGACTTGCCATCGGAAGGAAGAGACAGTATGGCAGATGATCCAGTGCTCTATGCA GTCAGTGCTGCCTCATTCGTCCTGGCGTTTTGGGGCACCGTTGCTTTCTTGTTTTTCCAT CCACTCGGACGGCGTGCAATTCTCGCGACAAGGAATTTGGTGTTTTGGTGTGGTCATTAA

Peptide Sequence

PEP ID	Os04t0647900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:32963581:32967002:1 gene:Os04g0647900 transcript:Os04t0647900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0647900-01)
Sequence	MSAGEDGVYFRMRFFFFFFLVVLCLLDSNISTSHGCFVEERTALMDIGSSLTRSNGTVPP SWGRGDGDDDCCLWERVKCSNITGRVSHLYFSNLYDSLEVLNAHGDSFWRFNTTVFSSFP ELQFLDLSSIYPSSLNIDGLVGLKLPKLQHLNLSYNWLQESILADLGELVSLEVLDASSN AMSGVVPTAVLKNLTNLKELNLSANGFSGSLPGSLLELPHLDPSGSSLAGRTPINSSLEP VSLQVLNLNNNRMSGALPTERAFGYLRNLRELHLSSNNFTGNISTFLLSLPHIERLDLSG NTFEGPIPITPSSNLSLSLKGLRFSQNNLSGKLSFFWLRNLTKLEEINLSGNINLAVDVN IPGWAPPFQLKQLALSGCGLDKGIIAEPHFLRTQHHLQELDLSNNNLSGRMPNWLFTKEA TLVNLNLGNNSLTGSLSPIWHPQTALQSIVISTNRITGKLPANFSAIFPSLSTLDLSDNN FHGEIPMSLCSIKHMKDLSLSNNNFSGKMPTCVFTDFLELWTLSASNNQLGGLVFGGMKK LSIGFAMHLQNNKFEGTLPRNLSGALVIMDLHDNSLSGELDTSFWNLSKLQVLDLSGNHI TGSIPQKICSLASIEILDLSNNNLSGSIPRCASASLSSLNLYGNSLSGNISDDLFNTSNL MYLDMRHNKLTGNLNWLRHLDKIKTLSLGWNDFEGQITPNLCKLKCPRIIDFSHNKLSGS LPPCVGNISCESDTAAQNYSPLLLIYVIIEAYIIVHDPIDFTFATKGGQYTYGYNFFDLM SGIDLSGNMLSGEIPWELGNLSHIKSLNLSNNFFTGQIPASFANMSEIESLDLSHNELSG LIPWQLTKLSSLAVFSVAYNNLSGCIPNSGQFGTYGMDSYQGNSNLRSMSKGNICSPDSG AGDLPSEGRDSMADDPVLYAVSAASFVLAFWGTVAFLFFHPLGRRAILATRNLVFWCGH

Transcript Sequence

Transcript ID	Os04t0647900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32963581:32967002:1 gene:Os04g0647900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os04t0647900-01)
Sequence	ACTGATCGATCATCCTCAGGTGTCTCCAGCCTGCTAGAGATGAGCGCAGGAGAAGACGGA GTTTATTTCAGGATGAGATTCTTCTTCTTCTTCTTCTTGGTTGTGCTATGCTTGCTAGAT TCCAATATCTCCACGTCCCATGGCTGCTTCGTGGAGGAGAGGACGGCGCTGATGGACATT GGCTCCTCTCTGACGCGCTCAAACGGCACGGTGCCGCCATCATGGGGGCGCGGCGACGGT GACGACGACTGCTGCTTGTGGGAGCGCGTCAAATGCAGCAACATCACTGGGCGAGTATCA CATCTCTACTTCTCAAACCTGTATGATTCTCTGGAAGTGCTAAATGCACATGGTGACTCG TTTTGGCGTTTCAACACGACGGTCTTCTCCTCATTCCCGGAGCTTCAGTTCCTGGATCTG TCCAGTATCTATCCCAGTTCTCTAAATATCGATGGCTTGGTAGGGCTGAAGCTGCCCAAG CTACAGCATCTCAACCTCAGTTATAACTGGTTGCAAGAGAGTATCCTCGCAGATCTTGGG GAACTGGTTTCGCTTGAAGTCCTAGATGCCAGCTCCAACGCCATGAGTGGAGTTGTTCCC ACTGCAGTTTTAAAAAATCTTACGAATCTGAAGGAGCTGAATTTGAGTGCCAACGGATTC AGCGGAAGCCTTCCGGGGTCATTACTTGAACTACCTCACCTTGATCCCTCAGGAAGTTCG TTAGCAGGACGTACTCCAATTAATTCATCTTTGGAGCCAGTTTCACTACAAGTATTAAAT CTCAACAACAACAGGATGAGTGGAGCTCTTCCAACCGAACGAGCATTCGGATATCTAAGG AACCTACGAGAATTGCATTTGAGTTCCAATAACTTCACTGGAAACATTTCTACTTTCTTG CTTTCACTTCCACATATTGAACGATTGGATCTCTCGGGAAATACTTTTGAAGGACCTATC CCTATAACTCCATCTTCAAATCTTTCTCTGTCTCTCAAAGGTCTTCGGTTTTCCCAGAAC AATCTGAGTGGTAAACTCTCATTTTTTTGGCTGAGGAACCTCACTAAACTTGAAGAAATC AACTTGTCAGGGAATATTAATTTAGCAGTTGATGTCAATATTCCTGGATGGGCACCTCCA TTCCAACTGAAACAGTTAGCTCTCTCTGGTTGTGGTCTTGACAAAGGCATAATTGCAGAA CCACACTTTCTACGCACACAACATCATTTGCAGGAGCTTGACTTGTCAAACAATAACTTG TCAGGAAGAATGCCGAATTGGCTTTTTACAAAAGAAGCAACTCTGGTTAACCTAAACCTT GGAAATAACTCGCTAACTGGATCTCTAAGTCCCATATGGCACCCCCAAACAGCTCTACAA TCTATTGTTATATCTACCAACCGTATTACAGGGAAGCTACCTGCCAACTTCAGCGCAATA TTTCCAAGCTTGTCCACTCTGGATTTGTCAGACAATAACTTTCATGGAGAAATTCCGATG TCACTGTGCAGCATCAAACACATGAAGGACTTGAGCTTATCAAACAATAATTTTTCTGGT AAAATGCCGACTTGTGTGTTCACTGATTTTCTTGAGCTGTGGACCTTGAGTGCCTCAAAC AACCAGCTTGGAGGTCTGGTGTTTGGTGGGATGAAAAAACTGTCCATCGGGTTTGCAATG CACCTACAGAACAACAAATTTGAAGGAACACTGCCTCGTAATCTGTCAGGAGCACTAGTA ATCATGGATTTGCATGATAACAGCCTGTCCGGTGAACTTGACACCTCATTTTGGAATCTG TCTAAATTGCAGGTACTAGATCTTTCTGGGAACCATATAACTGGCAGTATCCCTCAAAAA ATTTGCAGCTTGGCAAGCATTGAAATTTTAGATCTTTCAAACAACAACTTATCAGGATCT ATACCAAGATGTGCCAGTGCATCTCTAAGTTCGCTTAATCTGTATGGGAATTCATTATCA GGAAACATCTCGGATGATCTTTTCAACACATCAAATCTTATGTATTTGGATATGAGACAT AATAAGTTGACTGGTAACCTCAATTGGTTACGGCATCTTGATAAAATCAAGACACTTTCA TTGGGATGGAATGACTTTGAAGGCCAAATCACTCCAAACTTGTGTAAACTAAAGTGCCCA AGGATAATCGACTTCTCACACAACAAACTCTCAGGCTCACTGCCACCATGTGTTGGCAAC ATCTCTTGTGAGAGTGATACGGCAGCTCAAAATTATTCACCATTGCTACTTATTTATGTT ATAATAGAGGCTTACATAATTGTTCATGACCCAATAGACTTCACCTTTGCTACAAAAGGG GGACAATATACATATGGTTACAACTTCTTCGATCTGATGTCTGGTATCGACTTATCCGGG AATATGCTGTCAGGAGAAATTCCATGGGAGCTTGGGAATCTGAGCCATATCAAATCCCTC AACCTGTCCAACAATTTCTTCACTGGTCAAATCCCAGCAAGCTTTGCAAACATGAGCGAG ATTGAAAGCTTGGACCTTTCCCACAATGAACTGAGTGGATTGATTCCATGGCAGCTGACC AAATTATCGTCATTAGCGGTGTTCTCTGTGGCATATAACAACTTATCAGGATGTATTCCA AACTCTGGTCAGTTCGGCACGTACGGTATGGATAGCTACCAAGGCAACAGTAATCTTCGG AGTATGTCAAAGGGAAACATATGCTCTCCAGATTCAGGAGCAGGTGACTTGCCATCGGAA GGAAGAGACAGTATGGCAGATGATCCAGTGCTCTATGCAGTCAGTGCTGCCTCATTCGTC CTGGCGTTTTGGGGCACCGTTGCTTTCTTGTTTTTCCATCCACTCGGACGGCGTGCAATT CTCGCGACAAGGAATTTGGTGTTTTGGTGTGGTCATTAACGATTTGAAGTTTATTTTTCT GTCATCCATTTCTGATTGTGAAGTCTCCACTTACCAACTGCTTCAAAATTCTTGAGTCTA TAATTTTTAATCTAATGTCCATATTTTGTTTTGGGCCTGTCATCTAAATGTCGATGTTGT GTAAATGGCTGTTGAGAAATGTAGCTTGCTATAAGATGAATGAATATATTAGGCTGCAAT TT