Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0644700-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:32817477:32819752:1 gene:Os04g0644700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, epsilon subunit domain containing protein. (Os04t0644700-00)
Sequence

ATGGCGGGTGCGGCGTCGCCGGACCACCTGTTCGGCCTTCGCAACAGCTTCTACGTCGGC
GCGTACCAGGCCGTCATCACCGGCGTCCAGGCCATCCCCGCGCGCGCTGCCCTCTCCCCC
GACGCCCTCGCCGAGCGCGACTCCCTCCTCTACCGCTCCTACATCGCCATCGGCTCCCAC
CAGCTGGTGATCGACGAGATCGGGCCGGGCGCGGCCACGCCGCTCCAGGCCGTCAGGTTG
CTCACGGTGTATCTCTCCGGCGGCGCCGGCGGCAAGGAATCCGCGATCAGGAAGCTGAAC
GAGCTCCTGGCAGATGATGCGGTGGGGAGCAACCCGATTCTCCGGCTGGTTGCAGGGACG
GTTCTCATGCACGAGCGGGACTATGCCGGAGCACTGAAGCACACAAATTCTGGTGGGACT
ATGGAATTGCTTGCGATGAATGTTCAGATATGCCTCCAGATGCACAGGTCTGATCACGCA
GAGAAACAGCTGAGGATAATGCAGCAATTGGACGAAGACCACACACTGACGCAGCTCGCA
AACGCATGGGTAGACCTTGTCATGGGCGGGTCCAAGATCCAAGAAGCGCACCTCATCTTC
CAGGACTTGTCAGAGAAGTACCCAGCAACTTGCTTAATTCTTAATGGTAAAGCACTGTGC
CTGATGCACATGGGTAACTTTGAAGATGCAGAGGGATTGCTGCTGGAATCACTGAACAAG
GATGCCAAGGATGCAGAAACTCTAGCCAACCTCGTTGTGTGCAGTCTGAACCTAGGAAAG
TCTGCATCCCGCTACCTGAACCAACTGAAGCTGGCACACCCAGACCATATGCTGGTTAAG
CGAATGTCCTCTGCTGAAGACAGTTTCGACAGAGCCTGCCAAGCGATATCATGA

Peptide Sequence

PEP ID

Os04t0644700-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:32817477:32819752:1 gene:Os04g0644700 transcript:Os04t0644700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, epsilon subunit domain containing protein. (Os04t0644700-00)
Sequence

MAGAASPDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSH
QLVIDEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGT
VLMHERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLA
NAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNK
DAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS

Transcript Sequence

Transcript ID

Os04t0644700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:32817477:32819752:1 gene:Os04g0644700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, epsilon subunit domain containing protein. (Os04t0644700-00)
Sequence

GACGAGATCCATACCTCCCGGGCTCCCGGACGCGCGCGTGCTAGCTCGCTCGCCGATCGA
TCCATCGTCTCCACGTACGGCCGCGCGAAGGCACGTAGTGAGGTACGTGAGGCAGCAGCA
GCAGCAAGCATGGCGGGTGCGGCGTCGCCGGACCACCTGTTCGGCCTTCGCAACAGCTTC
TACGTCGGCGCGTACCAGGCCGTCATCACCGGCGTCCAGGCCATCCCCGCGCGCGCTGCC
CTCTCCCCCGACGCCCTCGCCGAGCGCGACTCCCTCCTCTACCGCTCCTACATCGCCATC
GGCTCCCACCAGCTGGTGATCGACGAGATCGGGCCGGGCGCGGCCACGCCGCTCCAGGCC
GTCAGGTTGCTCACGGTGTATCTCTCCGGCGGCGCCGGCGGCAAGGAATCCGCGATCAGG
AAGCTGAACGAGCTCCTGGCAGATGATGCGGTGGGGAGCAACCCGATTCTCCGGCTGGTT
GCAGGGACGGTTCTCATGCACGAGCGGGACTATGCCGGAGCACTGAAGCACACAAATTCT
GGTGGGACTATGGAATTGCTTGCGATGAATGTTCAGATATGCCTCCAGATGCACAGGTCT
GATCACGCAGAGAAACAGCTGAGGATAATGCAGCAATTGGACGAAGACCACACACTGACG
CAGCTCGCAAACGCATGGGTAGACCTTGTCATGGGCGGGTCCAAGATCCAAGAAGCGCAC
CTCATCTTCCAGGACTTGTCAGAGAAGTACCCAGCAACTTGCTTAATTCTTAATGGTAAA
GCACTGTGCCTGATGCACATGGGTAACTTTGAAGATGCAGAGGGATTGCTGCTGGAATCA
CTGAACAAGGATGCCAAGGATGCAGAAACTCTAGCCAACCTCGTTGTGTGCAGTCTGAAC
CTAGGAAAGTCTGCATCCCGCTACCTGAACCAACTGAAGCTGGCACACCCAGACCATATG
CTGGTTAAGCGAATGTCCTCTGCTGAAGACAGTTTCGACAGAGCCTGCCAAGCGATATCA
TGATTTCTGCAGTGCTGTTACTTACTTTGCTGTTAGATAAACCAAAAGCAATGCAACACT
CTGATCTTGTCATGACCTAGACAAGCTAATTTTTG