Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0644100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:32773316:32774144:1 gene:Os04g0644100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os04t0644100-01)
Sequence

ATGGGAATGGACTGGTACGCGTGGCTGTCGGCGGCGAGGCTGGACCAGGCGGTGGCGTAC
GAGTACGCGCTGGTGTTCTCGCGCAACGAGCTGGAGGCCGACGACCTCGCCTACTTCGAC
CACGAGTTCCTCCACAGCATGGGCGTCTCCGTCGCAAAGCACCGCCTCGAGATCCTCAAG
CTGGCGCGCCGGAGCCGCCGCCGCGCGGCGCTGTCGTCGCGCCTCGTCGCCGCCGTCGAC
CGCGTCGCCAGGTACGTGCGCGCGCTCGTCGTCGTCGTCGTCCAGGGCCGGGAGGACGAG
TCGTCCTCGGCGCTCGTGCTCGTGCCGAGCCAGCAGCTGCAGCCCGACGTCGACAAGACG
CCGAGGAGGAGCAGGTCCAAGCCCAAGTCGACCAAGGAGGTCGCCGCCGACGCCGCCGCT
CCCACCACACCGAAAGCCATGCGGTCGCCGGTGCTGGCCATCGGCGGCAGGGCCGCCTCG
ACGGTGCACGCCGTGAAGGACGGCGAGAAAGGCGGTGAGGACATGGTCAGGTGGGACCGC
CTGTTCCAGGACCTCAAGCCCAACTGA

Peptide Sequence

PEP ID

Os04t0644100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:32773316:32774144:1 gene:Os04g0644100 transcript:Os04t0644100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os04t0644100-01)
Sequence

MGMDWYAWLSAARLDQAVAYEYALVFSRNELEADDLAYFDHEFLHSMGVSVAKHRLEILK
LARRSRRRAALSSRLVAAVDRVARYVRALVVVVVQGREDESSSALVLVPSQQLQPDVDKT
PRRSRSKPKSTKEVAADAAAPTTPKAMRSPVLAIGGRAASTVHAVKDGEKGGEDMVRWDR
LFQDLKPN

Transcript Sequence

Transcript ID

Os04t0644100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:32773316:32774144:1 gene:Os04g0644100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os04t0644100-01)
Sequence

GATCATCCGATCGGGCAGAGGCGGAGAAGAGAGTCACGTGAGCGGAGAAGATTCCGGCGG
CGGCGAAGTGAAGTGAAGAGGCGATGGGAATGGACTGGTACGCGTGGCTGTCGGCGGCGA
GGCTGGACCAGGCGGTGGCGTACGAGTACGCGCTGGTGTTCTCGCGCAACGAGCTGGAGG
CCGACGACCTCGCCTACTTCGACCACGAGTTCCTCCACAGCATGGGCGTCTCCGTCGCAA
AGCACCGCCTCGAGATCCTCAAGCTGGCGCGCCGGAGCCGCCGCCGCGCGGCGCTGTCGT
CGCGCCTCGTCGCCGCCGTCGACCGCGTCGCCAGGTACGTGCGCGCGCTCGTCGTCGTCG
TCGTCCAGGGCCGGGAGGACGAGTCGTCCTCGGCGCTCGTGCTCGTGCCGAGCCAGCAGC
TGCAGCCCGACGTCGACAAGACGCCGAGGAGGAGCAGGTCCAAGCCCAAGTCGACCAAGG
AGGTCGCCGCCGACGCCGCCGCTCCCACCACACCGAAAGCCATGCGGTCGCCGGTGCTGG
CCATCGGCGGCAGGGCCGCCTCGACGGTGCACGCCGTGAAGGACGGCGAGAAAGGCGGTG
AGGACATGGTCAGGTGGGACCGCCTGTTCCAGGACCTCAAGCCCAACTGAGCGCGCAACG
ACGACGATGCCGCGCGTGATCGCGGCGCCGGCGGCGGATGCAGCGGTGTGTTACTGTTAG
GGTTTAATGCTTGTTCATCTCCATGCTTTGGTAATGGTCGAGCACTGTGCTCTTTCTTCC
TCCTGCATGCACAGTTGTGCACTGCTCCGGCGCCATTGCTGCATGTACA