Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0644000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:32769559:32772259:1 gene:Os04g0644000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0306F03.12 protein. (Os04t0644000-01)
Sequence	ATGGCGCCGCCGGCCACCTCGCTCATCGGCGGCGGCGTCGGCGGCGTCGCCTATGTCGTT CTGCTCTTGTTCCTCGCCAACGCCTGCGTCTCGGATGCTGGGTTCGAGGTATCCAGCCGT GTTCTGATGTCAGATGAGCAAGGAAGAAGTGGGTTGCTGGCTACATGGAGGCGATTGATC GTCGAGACACCGTCGCCGGGAGCCGGTGCTGACGCTGCTCATCCAGGAACCAAATCTCTT CCGCTGGCCGCGGCGAGGACTCACCGGAGAGACCCCCTCGCCAACCTCACCATGTACAGC GGCGGCTGGAACATCAGCGACCAGCATTACTGGGCTTCTGTGGCATACACCGCGGTTCCC CTCATCCTCGTCGGCATGCTGTGGTTCATCGTCTTCGGGATCGTCCTGCTCATCATCTCC TGCTGCTGCTGCTTCTGCCGGAAAAAGTACAACACCTACTCGCCGGCGACCTACTTCATC TCGCTGATCCTCCTCATAATATTCACCTTGGCCACAATAGCCGGATGTATCATACTGCAT TGTGGGCAGGAGCTATTCCACAGTAGCACGATCAAAACCGTGGACTACATTGTCGGACAA GGCAATCTGACGGTGGATAGTCTGAGGAACTTCTCAGGTAGCTTGGCTGCAGCCAAGAAC ATCGGGGTGGATCAGGTCTTCCTACCAGTTCAAGTGCAGCAGAAGATCGACGTCATCGAG GATAAGCTGAATTCTTCTGCAAATGAGTTCTCCACGCGCGCGCTCGAAAACTCCAAGAAG ATCAAGCATGTGATGGACAAGATGCAGTACAATTTGATGGTTATTGCAGCTGTAATGCTT GGCCTTGCGATATTCGGATTCCTCTTCTCCATCCTGGGGCTGCGGTTTCTTGTTTCCCTG CTGGTGATCGCTGGCTGGTTCGTTCTCGTCATCACAATCATGATGTCTGCTGCTTTCCTC CTCCTGCACAACGTGGTCGCCGACACATGCGTGGCCATGGACGACTGGGTGACGCACCCG CAGGCGCACACGGCGCTGGACGACATCCTCCCCTGCGTCGACGTCGCGACGGCGAACGAG TCCATGTACCGGAGCGAGGAGGTGACGGTGCAGCTGGTGGCGCTGGTGAACAACGTCATC GTCAACATCTCGAACAGGGACTTCCCGCCGTCGTTCCGGCCGCTCTACATCAACCAGTCC GGCCCGCTGATGCCCAAGCTCTGCGACCCCTTCAACCCGGACATGAGCCCCCGGAAATGC GCCCCCGGCGAGGTCAACTTCGACACCGCGGCGGCGGAGTGGAAGAAGTTCGAGTGCCAG ACCACCGGGCCGCCCGGGTCCGAGGTGTGCGCGACGGAGGGGAGGGTGACGCCGGCGGCG TACGGGCAGATGACGGCGGCGGCGAGCATCAGCCAGGGGCTGTACCAGTACGGCCCGTTC TTGATGGAGCTCCAGGACTGCAGCTTCGTCCGGGAGACGTTCACGGCGATCAGCGACAAC AACTGCCCGGGCCTCGAGCTCTACAGCCGGCACGTCTACCTCGGCCTGCTCCTCATCTCC GGCGCCGTCATGATGTCCATCGTCTTCTGGATGGTGCACACGCGGCAGCGGCGGCGGCGC TCGCTCGGGCTCGGCAGGTAG

Peptide Sequence

PEP ID	Os04t0644000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:32769559:32772259:1 gene:Os04g0644000 transcript:Os04t0644000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0306F03.12 protein. (Os04t0644000-01)
Sequence	MAPPATSLIGGGVGGVAYVVLLLFLANACVSDAGFEVSSRVLMSDEQGRSGLLATWRRLI VETPSPGAGADAAHPGTKSLPLAAARTHRRDPLANLTMYSGGWNISDQHYWASVAYTAVP LILVGMLWFIVFGIVLLIISCCCCFCRKKYNTYSPATYFISLILLIIFTLATIAGCIILH CGQELFHSSTIKTVDYIVGQGNLTVDSLRNFSGSLAAAKNIGVDQVFLPVQVQQKIDVIE DKLNSSANEFSTRALENSKKIKHVMDKMQYNLMVIAAVMLGLAIFGFLFSILGLRFLVSL LVIAGWFVLVITIMMSAAFLLLHNVVADTCVAMDDWVTHPQAHTALDDILPCVDVATANE SMYRSEEVTVQLVALVNNVIVNISNRDFPPSFRPLYINQSGPLMPKLCDPFNPDMSPRKC APGEVNFDTAAAEWKKFECQTTGPPGSEVCATEGRVTPAAYGQMTAAASISQGLYQYGPF LMELQDCSFVRETFTAISDNNCPGLELYSRHVYLGLLLISGAVMMSIVFWMVHTRQRRRR SLGLGR

Transcript Sequence

Transcript ID	Os04t0644000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32769559:32772259:1 gene:Os04g0644000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0306F03.12 protein. (Os04t0644000-01)
Sequence	GCGGGGCCCACCCTGGAGGTTCGTCTCCTCGCGCATTGCCATCGCCGAGCTCCCGAAAAT GGTGCGGTAACGGGAGCAATCGCAGAAGAGGACTGGAGGAGATCGATTCCCCATTGAGGA CGTGAAATTGGATTCTGTGGCAGAAGAAAGATCGATCGATCTGGTTTGGTCTGGTCTCCT GTAAAAGAATTCTCCCATGGCGCCGCCGGCCACCTCGCTCATCGGCGGCGGCGTCGGCGG CGTCGCCTATGTCGTTCTGCTCTTGTTCCTCGCCAACGCCTGCGTCTCGGATGCTGGGTT CGAGGTATCCAGCCGTGTTCTGATGTCAGATGAGCAAGGAAGAAGTGGGTTGCTGGCTAC ATGGAGGCGATTGATCGTCGAGACACCGTCGCCGGGAGCCGGTGCTGACGCTGCTCATCC AGGAACCAAATCTCTTCCGCTGGCCGCGGCGAGGACTCACCGGAGAGACCCCCTCGCCAA CCTCACCATGTACAGCGGCGGCTGGAACATCAGCGACCAGCATTACTGGGCTTCTGTGGC ATACACCGCGGTTCCCCTCATCCTCGTCGGCATGCTGTGGTTCATCGTCTTCGGGATCGT CCTGCTCATCATCTCCTGCTGCTGCTGCTTCTGCCGGAAAAAGTACAACACCTACTCGCC GGCGACCTACTTCATCTCGCTGATCCTCCTCATAATATTCACCTTGGCCACAATAGCCGG ATGTATCATACTGCATTGTGGGCAGGAGCTATTCCACAGTAGCACGATCAAAACCGTGGA CTACATTGTCGGACAAGGCAATCTGACGGTGGATAGTCTGAGGAACTTCTCAGGTAGCTT GGCTGCAGCCAAGAACATCGGGGTGGATCAGGTCTTCCTACCAGTTCAAGTGCAGCAGAA GATCGACGTCATCGAGGATAAGCTGAATTCTTCTGCAAATGAGTTCTCCACGCGCGCGCT CGAAAACTCCAAGAAGATCAAGCATGTGATGGACAAGATGCAGTACAATTTGATGGTTAT TGCAGCTGTAATGCTTGGCCTTGCGATATTCGGATTCCTCTTCTCCATCCTGGGGCTGCG GTTTCTTGTTTCCCTGCTGGTGATCGCTGGCTGGTTCGTTCTCGTCATCACAATCATGAT GTCTGCTGCTTTCCTCCTCCTGCACAACGTGGTCGCCGACACATGCGTGGCCATGGACGA CTGGGTGACGCACCCGCAGGCGCACACGGCGCTGGACGACATCCTCCCCTGCGTCGACGT CGCGACGGCGAACGAGTCCATGTACCGGAGCGAGGAGGTGACGGTGCAGCTGGTGGCGCT GGTGAACAACGTCATCGTCAACATCTCGAACAGGGACTTCCCGCCGTCGTTCCGGCCGCT CTACATCAACCAGTCCGGCCCGCTGATGCCCAAGCTCTGCGACCCCTTCAACCCGGACAT GAGCCCCCGGAAATGCGCCCCCGGCGAGGTCAACTTCGACACCGCGGCGGCGGAGTGGAA GAAGTTCGAGTGCCAGACCACCGGGCCGCCCGGGTCCGAGGTGTGCGCGACGGAGGGGAG GGTGACGCCGGCGGCGTACGGGCAGATGACGGCGGCGGCGAGCATCAGCCAGGGGCTGTA CCAGTACGGCCCGTTCTTGATGGAGCTCCAGGACTGCAGCTTCGTCCGGGAGACGTTCAC GGCGATCAGCGACAACAACTGCCCGGGCCTCGAGCTCTACAGCCGGCACGTCTACCTCGG CCTGCTCCTCATCTCCGGCGCCGTCATGATGTCCATCGTCTTCTGGATGGTGCACACGCG GCAGCGGCGGCGGCGCTCGCTCGGGCTCGGCAGGTAGATGTGAAGAGTGATACTGTACAT CGCAATATGGCATGCCTGCCATGGCAGCCATGCCCCGCACCTGTTCATCAATCTGATCTG GTGATTTGTACTATATGATGTGAATGATGTCAATATCGAGTATATTTTGGAAGTGAAAAA AAGAAAATGTTTAGCTGCTC