Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0643100-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:32732806:32733949:1 gene:Os04g0643100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-01);Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-02)
Sequence	ATGTCGGGGCAGACGCAGCGCCTGAACGTGGTGCCGACGGTGACGATGCTCGGGGTCATG AAGGCCCGGCTCGTCGGCGCCACCCGCGGCCACGCGCTCCTCAAGAAGAAGTCGGACGCG CTCACCGTGCAGTTCCGCGCCATCCTCAAGAAGATCGTCGCCGCCAAGGAGTCCATGGGG GAGGCCATGAGGGCGTCCTCCTTCTCCCTCGCCGAGGCCAAGTACGTCGCCGGCGACGGC GTCCGCCACGTCGTCCTCCAGTCCGTCCGCTCCGCCTCCCTCCGCGTCCGCTCCCACCAG GAGAACGTCGCCGGTGTCAAGCTCCCCAAGTTCACCCACTTCGTCGACCCCGCCGCCGGC TCCGCTGGGCCATCCAACGCGTCCCCCAGCCTCACCGGCCTCGCCCGCGGCGGGCAGCAG GTCGCCGCCTGCCGCGCCGCGCACGTCAAGGCCATCGAGGTGCTCGTCGAGCTCGCCTCG CTGCAGACGTCCTTCCTGACCCTCGATGAGGCCATCAAGACCACCAACCGCCGTGTCAAC GCGCTGGAGAACGTCGTGAAGCCGAGGCTGGAGAACACCATCAGCTACATCAAGGGGGAG CTGGACGAGCTCGAGCGTGAGGACTTCTTCAGGCTCAAGAAGATCCAGGGTTACAAGAAG AGGGAGATCGAGAGGCAGATGGCTGCAGCCAAGCAATTCGCAGAGGAACAGCTTGCGGAG GAGGTTGCCCTCAAGAGGGGTATCTCTGTGGGTGCTGCCACCAACATGTTGGTTGCCGGT GGAGAGAGGGACGAAGACATCATCTTCTGA

Peptide Sequence

PEP ID	Os04t0643100-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:32732806:32733949:1 gene:Os04g0643100 transcript:Os04t0643100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-01);Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-02)
Sequence	MSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRAILKKIVAAKESMG EAMRASSFSLAEAKYVAGDGVRHVVLQSVRSASLRVRSHQENVAGVKLPKFTHFVDPAAG SAGPSNASPSLTGLARGGQQVAACRAAHVKAIEVLVELASLQTSFLTLDEAIKTTNRRVN ALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMAAAKQFAEEQLAE EVALKRGISVGAATNMLVAGGERDEDIIF

Transcript Sequence

Transcript ID	Os04t0643100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32732806:32733949:1 gene:Os04g0643100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-01);Similar to Vacuolar ATP synthase subunit D (EC 3.6.3.14) (V-ATPase D subunit) (Vacuolar proton pump D subunit). (Os04t0643100-02)
Sequence	CTCCACCTCAGATCTCCGGCGAGCCGATCGAATCGGCGGCTGCGGCGGCGGCGGCGGCGC GATGTCGGGGCAGACGCAGCGCCTGAACGTGGTGCCGACGGTGACGATGCTCGGGGTCAT GAAGGCCCGGCTCGTCGGCGCCACCCGCGGCCACGCGCTCCTCAAGAAGAAGTCGGACGC GCTCACCGTGCAGTTCCGCGCCATCCTCAAGAAGATCGTCGCCGCCAAGGAGTCCATGGG GGAGGCCATGAGGGCGTCCTCCTTCTCCCTCGCCGAGGCCAAGTACGTCGCCGGCGACGG CGTCCGCCACGTCGTCCTCCAGTCCGTCCGCTCCGCCTCCCTCCGCGTCCGCTCCCACCA GGAGAACGTCGCCGGTGTCAAGCTCCCCAAGTTCACCCACTTCGTCGACCCCGCCGCCGG CTCCGCTGGGCCATCCAACGCGTCCCCCAGCCTCACCGGCCTCGCCCGCGGCGGGCAGCA GGTCGCCGCCTGCCGCGCCGCGCACGTCAAGGCCATCGAGGTGCTCGTCGAGCTCGCCTC GCTGCAGACGTCCTTCCTGACCCTCGATGAGGCCATCAAGACCACCAACCGCCGTGTCAA CGCGCTGGAGAACGTCGTGAAGCCGAGGCTGGAGAACACCATCAGCTACATCAAGGGGGA GCTGGACGAGCTCGAGCGTGAGGACTTCTTCAGGCTCAAGAAGATCCAGGGTTACAAGAA GAGGGAGATCGAGAGGCAGATGGCTGCAGCCAAGCAATTCGCAGAGGAACAGCTTGCGGA GGAGGTTGCCCTCAAGAGGGGTATCTCTGTGGGTGCTGCCACCAACATGTTGGTTGCCGG TGGAGAGAGGGACGAAGACATCATCTTCTGATCATCTTCGGTCATACAGTGATTCAATCG GTGCGTAGTATTGATGCTTTATGCTATTTTTGTGATCTGATATTGGAAACCTCTCATAGA TGTGTTCACAGTGGCACATTCTTTTCATAAGAACTACAATTTTAATATATCAGACTTCAG TATTAGTTAAGTTGCATCAATTAGAGATAACTGTTTTTAGGAACAGTGGTTCTTAGATGG ATGCAATTTACTTTGTTAGATATGTCAAGATATCAAACTAATGATCCTATTCAAGCTTTG TATC