Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0643000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:32726344:32730766:1 gene:Os04g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CULLIN 3B description:Similar to Cullin-3 (CUL-3). Splice isoform 2. (Os04t0643000-01)
Sequence	ATGAACTCGCAGAAGAAGCGCAGCCCCAAGATCGAGCCCTTCCGGCACCGCGTGGATGCG GACCCAAAGTCCTTCGACAAATCGTGGAAGAAGCTCGAGGACGCCATCCGCGAGATTTAC AACCACAACGCCAGCGGCCTCTCCTTCGAGGAGCTGTACAGGACTGCTTATAACTTGGTT CTTCACAAGCATGGTCTGAAGCTATATGATAAACTCACAGAGAATTTAAAAGGACACCTG AAAGAAATGTGCAGATCAATAGAGGATGCCCAAGGTAGTTTGTTTCTGGAGGAACTGCAG AGAAGATGGGCTGATCACAATAAGGCACTACAAATGATCAGAGATATACTCATGTATATG GATAGGACATTTATTGCAACTAACAAAAAGACACCTGTCTTTGACCTTGGTCTAGAGTTG TGGAGAGATATCGTTGTCCGCACTCCCAAAATTCATGGGAGGTTGCTTGACACACTCCTT GAACTCATTCATAGAGAGAGGATGGGTGAGATGATAAACAGAGGTCTGATGAGGAGTACC ACCAAAATGTTGATGGATCTAGGGTCTTCTGTCTATCATGATGACTTTGAGAAGCCATTC CTTGAGGTATCCGCAAGTTTCTATAGTGGTGAGTCACAACAGTTCATTGAGTGCTGTGAT TGTGGCGAATATCTCAAGAAAGCTGAGAGACGGCTTGCTGAAGAGTTGGAGCGTGTTTCT CAGTATATGGATGCCAAAACCGCAGACAAAATAACTAGTGTTGTGGACACTGAGATGCTT GCAAATCACATGCAGCGGTTGATTCTTATGGAGAATTCTGGTCTTGTGAATATGCTTGTT GATGACAAACATGAAGACCTTAGCAGGATGTACAACTTGTTTAAACGTGTTCCTGATGGG CATTCAACAATTAGATCTGTGATGGCCTCTCATGTTAAGGAAAGTGGAAAGGCATTGGTA TCTGACCCAGAGAAGATAAAGGACCCTGTTGAGTTTGTCCAGCGTCTTCTAAATGAGAAA GACAAGTATGATGAGATCATAAGTATTTCATTCAGCAATGACAAGGCTTTCCAAAATGCT CTGAATTCCTCCTTCGAGAATTTCATCAACTTGAACAACCGATCTCCTGAATTCATTTCG CTGTTTGTTGATGACAAGCTCCGGAAAGGGGTGAAAGGGGCCAATGAAGAGGATGTTGAA ACTGTCTTGGACAAGGTGATGATGCTCTTCAGATATTTGCAGGAGAAAGATGTTTTTGAG AAATATTACAAGCAACACTTGGCCAAACGTCTTCTATCTGGGAAAACTACTTCTGATGAA GCTGAGAGGAGTATGCTTGTGAAGCTGAAGACGGAATGTGGCTACCAGTTTACGTCAAAA TTGGAAGGCATGTTCAATGATCTGAAGACATCGCATGATACTATGCAAAGTTTTTATGCT AATCTCTCTGGTGATACTGATAGCCCAACAATATCAGTCCAGATACTCACCACTGGGTCT TGGCCAACACAGCCATGTACCCCCTGCAAACTTCCACCTGAAATTGTTGATATATCTGAG AAATTCCGGGCATTCTACCTTGGCACCCACAATGGCAGGAGATTGACATGGCAAACAAAC ATGGGGAATGCAGATATCAAAGCAACGTTCGGAGGCCGCAGGCATGAGTTGAATGTCTCG ACATATCAGATGTGTGTCCTGATGCTGTTTAATTCAGCAGATGGCTTGACTTACGGTGAC ATTGAGCAGGCCACAGGTATACCACATGCTGATCTGAAACGCTGCCTCCAGTCTCTTGCT TGTGTTAAGGGTAAGAATGTGCTGCGGAAGGAACCCATGAGCAAGGATATATCTGAAGAT GACACTTTCTACTACAATGACAAGTTCACAAGCAAGTTGGTCAAGGTGAAGATTGGCACC GTGGTTGCTCAGAAAGAAACAGAACCAGAGAAGTTGGAAACTCGCCAGAGAGTTGAGGAA GACAGGAAACCTCAAATTGAGGCTGCAATTGTCAGAATCATGAAGTCCAGAAGAGTCTTG GACCACAATAGCATAATCACGGAGGTGACAAAGCAGCTTCAATCGCGCTTTTTGCCAAAT CCTGTTGTGATAAAGAAAAGAATAGAGTCCCTGATCGAGAGGGAGTTCTTGGAGAGGGAC AAGGTAGATAGGAAGATGTACCGTTATCTTGCATAG

Peptide Sequence

PEP ID	Os04t0643000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:32726344:32730766:1 gene:Os04g0643000 transcript:Os04t0643000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CULLIN 3B description:Similar to Cullin-3 (CUL-3). Splice isoform 2. (Os04t0643000-01)
Sequence	MNSQKKRSPKIEPFRHRVDADPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLV LHKHGLKLYDKLTENLKGHLKEMCRSIEDAQGSLFLEELQRRWADHNKALQMIRDILMYM DRTFIATNKKTPVFDLGLELWRDIVVRTPKIHGRLLDTLLELIHRERMGEMINRGLMRST TKMLMDLGSSVYHDDFEKPFLEVSASFYSGESQQFIECCDCGEYLKKAERRLAEELERVS QYMDAKTADKITSVVDTEMLANHMQRLILMENSGLVNMLVDDKHEDLSRMYNLFKRVPDG HSTIRSVMASHVKESGKALVSDPEKIKDPVEFVQRLLNEKDKYDEIISISFSNDKAFQNA LNSSFENFINLNNRSPEFISLFVDDKLRKGVKGANEEDVETVLDKVMMLFRYLQEKDVFE KYYKQHLAKRLLSGKTTSDEAERSMLVKLKTECGYQFTSKLEGMFNDLKTSHDTMQSFYA NLSGDTDSPTISVQILTTGSWPTQPCTPCKLPPEIVDISEKFRAFYLGTHNGRRLTWQTN MGNADIKATFGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCLQSLA CVKGKNVLRKEPMSKDISEDDTFYYNDKFTSKLVKVKIGTVVAQKETEPEKLETRQRVEE DRKPQIEAAIVRIMKSRRVLDHNSIITEVTKQLQSRFLPNPVVIKKRIESLIEREFLERD KVDRKMYRYLA

Transcript Sequence

Transcript ID	Os04t0643000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32726344:32730766:1 gene:Os04g0643000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CULLIN 3B description:Similar to Cullin-3 (CUL-3). Splice isoform 2. (Os04t0643000-01)
Sequence	AGGAGAATTAAACGAGCAAGATATATCGTCGACGAGGCCCATCGCGTGCGCTTCCCCTCC CCTCTCGCCTCCCCAAATTCGCGTTCGCCACCGTCGCGTCCCCCCTCGCCTCTGCCTCGC CGGAACCCTAGGGAGATCGCCGGAGCACGGCGCTGGCTCACGGGCGGCGGCGGAGATGAA CTCGCAGAAGAAGCGCAGCCCCAAGATCGAGCCCTTCCGGCACCGCGTGGATGCGGACCC AAAGTCCTTCGACAAATCGTGGAAGAAGCTCGAGGACGCCATCCGCGAGATTTACAACCA CAACGCCAGCGGCCTCTCCTTCGAGGAGCTGTACAGGACTGCTTATAACTTGGTTCTTCA CAAGCATGGTCTGAAGCTATATGATAAACTCACAGAGAATTTAAAAGGACACCTGAAAGA AATGTGCAGATCAATAGAGGATGCCCAAGGTAGTTTGTTTCTGGAGGAACTGCAGAGAAG ATGGGCTGATCACAATAAGGCACTACAAATGATCAGAGATATACTCATGTATATGGATAG GACATTTATTGCAACTAACAAAAAGACACCTGTCTTTGACCTTGGTCTAGAGTTGTGGAG AGATATCGTTGTCCGCACTCCCAAAATTCATGGGAGGTTGCTTGACACACTCCTTGAACT CATTCATAGAGAGAGGATGGGTGAGATGATAAACAGAGGTCTGATGAGGAGTACCACCAA AATGTTGATGGATCTAGGGTCTTCTGTCTATCATGATGACTTTGAGAAGCCATTCCTTGA GGTATCCGCAAGTTTCTATAGTGGTGAGTCACAACAGTTCATTGAGTGCTGTGATTGTGG CGAATATCTCAAGAAAGCTGAGAGACGGCTTGCTGAAGAGTTGGAGCGTGTTTCTCAGTA TATGGATGCCAAAACCGCAGACAAAATAACTAGTGTTGTGGACACTGAGATGCTTGCAAA TCACATGCAGCGGTTGATTCTTATGGAGAATTCTGGTCTTGTGAATATGCTTGTTGATGA CAAACATGAAGACCTTAGCAGGATGTACAACTTGTTTAAACGTGTTCCTGATGGGCATTC AACAATTAGATCTGTGATGGCCTCTCATGTTAAGGAAAGTGGAAAGGCATTGGTATCTGA CCCAGAGAAGATAAAGGACCCTGTTGAGTTTGTCCAGCGTCTTCTAAATGAGAAAGACAA GTATGATGAGATCATAAGTATTTCATTCAGCAATGACAAGGCTTTCCAAAATGCTCTGAA TTCCTCCTTCGAGAATTTCATCAACTTGAACAACCGATCTCCTGAATTCATTTCGCTGTT TGTTGATGACAAGCTCCGGAAAGGGGTGAAAGGGGCCAATGAAGAGGATGTTGAAACTGT CTTGGACAAGGTGATGATGCTCTTCAGATATTTGCAGGAGAAAGATGTTTTTGAGAAATA TTACAAGCAACACTTGGCCAAACGTCTTCTATCTGGGAAAACTACTTCTGATGAAGCTGA GAGGAGTATGCTTGTGAAGCTGAAGACGGAATGTGGCTACCAGTTTACGTCAAAATTGGA AGGCATGTTCAATGATCTGAAGACATCGCATGATACTATGCAAAGTTTTTATGCTAATCT CTCTGGTGATACTGATAGCCCAACAATATCAGTCCAGATACTCACCACTGGGTCTTGGCC AACACAGCCATGTACCCCCTGCAAACTTCCACCTGAAATTGTTGATATATCTGAGAAATT CCGGGCATTCTACCTTGGCACCCACAATGGCAGGAGATTGACATGGCAAACAAACATGGG GAATGCAGATATCAAAGCAACGTTCGGAGGCCGCAGGCATGAGTTGAATGTCTCGACATA TCAGATGTGTGTCCTGATGCTGTTTAATTCAGCAGATGGCTTGACTTACGGTGACATTGA GCAGGCCACAGGTATACCACATGCTGATCTGAAACGCTGCCTCCAGTCTCTTGCTTGTGT TAAGGGTAAGAATGTGCTGCGGAAGGAACCCATGAGCAAGGATATATCTGAAGATGACAC TTTCTACTACAATGACAAGTTCACAAGCAAGTTGGTCAAGGTGAAGATTGGCACCGTGGT TGCTCAGAAAGAAACAGAACCAGAGAAGTTGGAAACTCGCCAGAGAGTTGAGGAAGACAG GAAACCTCAAATTGAGGCTGCAATTGTCAGAATCATGAAGTCCAGAAGAGTCTTGGACCA CAATAGCATAATCACGGAGGTGACAAAGCAGCTTCAATCGCGCTTTTTGCCAAATCCTGT TGTGATAAAGAAAAGAATAGAGTCCCTGATCGAGAGGGAGTTCTTGGAGAGGGACAAGGT AGATAGGAAGATGTACCGTTATCTTGCATAGATGCCCTCCCTGTCGAAACAACAGACTGT CCATAAACGGGTTGCTGCTATGTATACCTACCCATGTTTCAATTTTCTTCCATTCATTCT CTTTAGATCTGCTGCAGAGCCAAAGGTGGCATACTAACATTTCTAGGCCTGTTATCTTTG GTACAGATATAGAAAACGATCTTATATCTTTCTGGTAATACATAGAATGTTGCTGGTCGT T