Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0640900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:32606375:32608648:1 gene:Os04g0640900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 5 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0640900-01)
Sequence	ATGGACCTTAATATGACAAATCTTTGGTTTCATGGGAAGGAACATATAGCTGCTTCGCCA TTCCCACAAGTTGCAACATCAATGAACTTCACTTGCCTTGGCAGCTCAAAAACAATCGAG ACTTCTAAAAAAATGTTTCAGCAGAGCGATCAAAGCTTGTCTATTCCTGATGATGGATGC AGGCTTGTCCTTGGACTTGGACCAACACCTAATCTACATTATGCTGATAATGAGTCATCC GGTGGCAACAGGGATAAAGAATCTGCAAATTTGTTCAGCCAACATTTTGCCATAGCCGAT CATGGTCTGATGTTGGGCATTTCGAGAGGTGGCACAAGAAATTTTCAAGCCACAACAATG ATCGAGAAGTATTCACATCAAAATAGAAATGGTATCGTCTTCCCACTTACTGATGAAGGA TCAACTTCAGCTAAAAGGAAACCAGGTGGTTATGTGCTGCCACTTCTGTTTGCTCCAAGA TCAGATGATATCTGTCCCAATGGAACACCACCAGTGACCGATATTCAACATGTTGAAACT GTAGATGATTGTGACGATGATCACATTACGTCTCTTAATCAGCAGAAGGTTCAGATTAGC CCCGAGCCTTCAGCAACAACTGATTGTTCTTTTGCTGCAACTTCAGATATGATATTCTCC TCAACTAGCACGGAGCAGAGAAGTCACCAACGACATCCTAAGAAGTGTAGGTTCAATGGG TGTTCAAAAGGAGCAAGAGGGGCAACAGGGCTCTGCATTTCCCATGGTGGTGGTCAGCGG TGTCAAAAGCCTGGTTGCAACAAAGGTGCCGAGAGCCGAACAGCTTACTGCAAATCTCAT GGTGGAGGGAAACGGTGTCAGGAGCTAGGCTGCACCAAAAGTGCTGAAGGGAAGACTGAG TTCTGCATTGCTCATGGTGGTGGGCGTCGATGCGGAACTCCGGGGTGTACGAAGGCAGCA AGGGGAAGATCAGGATTTTGCATAAAACATGGTGGAGGGAAGAGATGCAGGGTAGAGGGA TGCAGCAGGAGTGCCGAAGGACAGTTTGGGTTGTGCATCTCACATGGAGGTGGTCGCCGG TGTCAGTACCCGAACTGCAGTAAGGGAGCACAAGGAGGCACCATGTTTTGCAAGTCCCAT GGTGGAGGCAAACGGTGTATATTTGAAGGCTGTACTAAAGGTGCCGAGGGCAACACGCTG CTATGTAAAGGGCACGGTGGTGGTAAGAGGTGCCTCTTTGAGGGAGGTGGTGTCTGTCCT AAAAGTGTTCATGGTGGAACTAGCTTCTGCGTCGCTCATGGAGGCGGCAAACGCTGTTCT GTACCAGGATGTACCAAGAGCGCCCGTGGTCGCACTGATTGCTGCGTGAGGCATGGTGGT GGCAAGCGTTGCAAGGTTGACGGTTGCGACAAGAGTGCTCAGGGGAGCACGGACTTCTGC AAGGCGCATGGAGGCGGCAAACGATGCGCTTGGAGCACCGGCTGTGAGAGGTTTGCAAGG GGAAGGAGTGGGTTATGTGCTGCACATGGAACCCTGATGGCTTCAAAGCAAGTGCCTGAA TCTGAGCACAGCAGAGGCATGATCAGGAACAGCCTCTTCAGCAAGATGGTCTCTGCATCC TCGATGACGGCTGGTGCTAGCATGGATCATGCCATCTCTTCTTCTCTCCCTGGTGCCTCG TCGGATCGCGGTGAGTCCTTGGAAGAGATGCGGAACGGCAAGCTCCTGATACCGCATCAG GTCCTGGTTCCTGGTTCAATGAGGCCATCTTCTTCGCATGGCAAAGGTCAAGAGGACGGA GGGAGCCAGGAGCAGCAGTGCTTCGGGTTCGTCGTGCCGGAGGGGAGGGTTCATGGTGGG GGCCTGATGTCCATGCTTGGAGCTGGAGGCAATCTTGACGATCCGAAGGACTGA

Peptide Sequence

PEP ID	Os04t0640900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:32606375:32608648:1 gene:Os04g0640900 transcript:Os04t0640900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 5 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0640900-01)
Sequence	MDLNMTNLWFHGKEHIAASPFPQVATSMNFTCLGSSKTIETSKKMFQQSDQSLSIPDDGC RLVLGLGPTPNLHYADNESSGGNRDKESANLFSQHFAIADHGLMLGISRGGTRNFQATTM IEKYSHQNRNGIVFPLTDEGSTSAKRKPGGYVLPLLFAPRSDDICPNGTPPVTDIQHVET VDDCDDDHITSLNQQKVQISPEPSATTDCSFAATSDMIFSSTSTEQRSHQRHPKKCRFNG CSKGARGATGLCISHGGGQRCQKPGCNKGAESRTAYCKSHGGGKRCQELGCTKSAEGKTE FCIAHGGGRRCGTPGCTKAARGRSGFCIKHGGGKRCRVEGCSRSAEGQFGLCISHGGGRR CQYPNCSKGAQGGTMFCKSHGGGKRCIFEGCTKGAEGNTLLCKGHGGGKRCLFEGGGVCP KSVHGGTSFCVAHGGGKRCSVPGCTKSARGRTDCCVRHGGGKRCKVDGCDKSAQGSTDFC KAHGGGKRCAWSTGCERFARGRSGLCAAHGTLMASKQVPESEHSRGMIRNSLFSKMVSAS SMTAGASMDHAISSSLPGASSDRGESLEEMRNGKLLIPHQVLVPGSMRPSSSHGKGQEDG GSQEQQCFGFVVPEGRVHGGGLMSMLGAGGNLDDPKD

Transcript Sequence

Transcript ID	Os04t0640900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32606375:32608648:1 gene:Os04g0640900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 5 description:Similar to ORW1943Ba0077G13.1 protein. (Os04t0640900-01)
Sequence	GTTTATACTATATGCTTCCTTTATGGTGAAGTTATAAAACTGGGATTCTGATGGTTTGAC GAAAGCTCTTGGTCCCCAAACAATACTAAACTCCTTTTTCTGTCACATCTTACCGTATTT ATATTAAGAAGGATGGACCTTAATATGACAAATCTTTGGTTTCATGGGAAGGAACATATA GCTGCTTCGCCATTCCCACAAGTTGCAACATCAATGAACTTCACTTGCCTTGGCAGCTCA AAAACAATCGAGACTTCTAAAAAAATGTTTCAGCAGAGCGATCAAAGCTTGTCTATTCCT GATGATGGATGCAGGCTTGTCCTTGGACTTGGACCAACACCTAATCTACATTATGCTGAT AATGAGTCATCCGGTGGCAACAGGGATAAAGAATCTGCAAATTTGTTCAGCCAACATTTT GCCATAGCCGATCATGGTCTGATGTTGGGCATTTCGAGAGGTGGCACAAGAAATTTTCAA GCCACAACAATGATCGAGAAGTATTCACATCAAAATAGAAATGGTATCGTCTTCCCACTT ACTGATGAAGGATCAACTTCAGCTAAAAGGAAACCAGGTGGTTATGTGCTGCCACTTCTG TTTGCTCCAAGATCAGATGATATCTGTCCCAATGGAACACCACCAGTGACCGATATTCAA CATGTTGAAACTGTAGATGATTGTGACGATGATCACATTACGTCTCTTAATCAGCAGAAG GTTCAGATTAGCCCCGAGCCTTCAGCAACAACTGATTGTTCTTTTGCTGCAACTTCAGAT ATGATATTCTCCTCAACTAGCACGGAGCAGAGAAGTCACCAACGACATCCTAAGAAGTGT AGGTTCAATGGGTGTTCAAAAGGAGCAAGAGGGGCAACAGGGCTCTGCATTTCCCATGGT GGTGGTCAGCGGTGTCAAAAGCCTGGTTGCAACAAAGGTGCCGAGAGCCGAACAGCTTAC TGCAAATCTCATGGTGGAGGGAAACGGTGTCAGGAGCTAGGCTGCACCAAAAGTGCTGAA GGGAAGACTGAGTTCTGCATTGCTCATGGTGGTGGGCGTCGATGCGGAACTCCGGGGTGT ACGAAGGCAGCAAGGGGAAGATCAGGATTTTGCATAAAACATGGTGGAGGGAAGAGATGC AGGGTAGAGGGATGCAGCAGGAGTGCCGAAGGACAGTTTGGGTTGTGCATCTCACATGGA GGTGGTCGCCGGTGTCAGTACCCGAACTGCAGTAAGGGAGCACAAGGAGGCACCATGTTT TGCAAGTCCCATGGTGGAGGCAAACGGTGTATATTTGAAGGCTGTACTAAAGGTGCCGAG GGCAACACGCTGCTATGTAAAGGGCACGGTGGTGGTAAGAGGTGCCTCTTTGAGGGAGGT GGTGTCTGTCCTAAAAGTGTTCATGGTGGAACTAGCTTCTGCGTCGCTCATGGAGGCGGC AAACGCTGTTCTGTACCAGGATGTACCAAGAGCGCCCGTGGTCGCACTGATTGCTGCGTG AGGCATGGTGGTGGCAAGCGTTGCAAGGTTGACGGTTGCGACAAGAGTGCTCAGGGGAGC ACGGACTTCTGCAAGGCGCATGGAGGCGGCAAACGATGCGCTTGGAGCACCGGCTGTGAG AGGTTTGCAAGGGGAAGGAGTGGGTTATGTGCTGCACATGGAACCCTGATGGCTTCAAAG CAAGTGCCTGAATCTGAGCACAGCAGAGGCATGATCAGGAACAGCCTCTTCAGCAAGATG GTCTCTGCATCCTCGATGACGGCTGGTGCTAGCATGGATCATGCCATCTCTTCTTCTCTC CCTGGTGCCTCGTCGGATCGCGGTGAGTCCTTGGAAGAGATGCGGAACGGCAAGCTCCTG ATACCGCATCAGGTCCTGGTTCCTGGTTCAATGAGGCCATCTTCTTCGCATGGCAAAGGT CAAGAGGACGGAGGGAGCCAGGAGCAGCAGTGCTTCGGGTTCGTCGTGCCGGAGGGGAGG GTTCATGGTGGGGGCCTGATGTCCATGCTTGGAGCTGGAGGCAATCTTGACGATCCGAAG GACTGAATTTTGCTGAAAATGTTAAAGTTGCAGCTATTTTTATGCTGTCATTTATGATTT CTGCATCTAGAATCTATAAGATTTCAGATCACCATTGCACTATGCTGTCAAGCATGACTG CTTGATCGAAACTGAATTCTGAATTATGTGGCTTAGGCCTTGTATAAAGTATTTTGTCAT TCATATGGCACTTACATACACAAAGAGCAGAATACCTGAAGAGCTGTTTGATTG