Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0633200-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:32223116:32226952:-1 gene:Os04g0633200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0613A10.1 protein. (Os04t0633200-00)
Sequence	ATGCAAGGAAAAAAAGAATCAACAGTTATGGAAGCAGCAACCACCAACATTTTCTACCGT CCCGTCATCTTCTTCTCCGTGCTCCTTTGTTTCCAATACCGTGCCGCCGGCGTTGCATCG GACACGCTCAGCAATGGCCGCAACCTCACTGATGGCGACACGCTCGTGTCAGCCAATGGC TCCTTCACTCTGGGGTTCTTCTCACCCGGCTTGCCAAGCAGGAGATACCTCGCGATATGG TTCTCCGAGTCGGCGGACGCCGTCTGGGTGGCCAACCGCGACAGCCCACTGAACGACACC GCCGGCGTAGTGGTTATCGATGGCACGGGCGGGCTCGTCCTGCTCGACGGCGCCGCCGGC CAGGCCGCCTGGTCGTCGAACACGACTGGCTCGTCTCCATCGGTGGCGGTGCAGCTGCTC GAGTCTGGGAACCTCGTCGTGCGCGACCAGGGCAGCGGCGACGTGCTGTGGCAGTCGTTC GACAACCCGTCGAACACCCTGATCGCCGGCATGAGGCTCGGCAGGAACCCACGGACCGGC GCCGAGTGGTCCCTCACGTCGTGGCGCGCGCCCGACGACCCGGCGACGGGGGGCTGCCGC CGCGTGATGGACACGAGAGGGCTAGCGGACTGCGTCTCGTGGTGCGGCGCCGGCAAGAAG TACCGCACGGGGCCATGGAACGGGCTGTGGTTCAGCGGTGTCCCGGAGATGGCATCGTAC TCGTCCATGTTCGCGAACCAGGTGGTGGTCAAGCCCGACGAGATCGCCTACGTCTTCACC GCCGCCACCGCCGCGGCCCCCTTCTCCCGCCTCGTGCTGAGTGAGGCCGGCGTGATCCAG CGCCTCGTGTGGGATCCCAGCAGCAAGGGGTGGAACACGTTCGCGCAGGCGCCGCGCGAC GTATGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGTGAACACCGCGTCG ACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCGATGTTCCCCTCCCAGTGGTCCATG AGGGAGACCTCCGGTGGTTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACC ACGGACGGGTTCGTGCCGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTG GACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTCGCCAACTGTTCCTGCGTC GCCTACGCCGCCGCGGACATCCGAGGCGCCGGCGGCGGCAGCGGATGCGTGATGTGGACG GTTAACAATAAGAAGAGGACTGTGATAAAAGTTCTGCTCCCAGTTACAGCAGCATGTTTG CTTCTGCTGATGAGCATGTTCCTTGTGTGGTTACGCAAGTGCAGAGGCAAACGTCAGAAT AAGGTTGTCCAGAAAAGGATGCTAGGATACTTGAGTGCATTAAATGAACTTGGTGATGAA AATTTAGAACTCCCGTTTGTCAGTTTTGGAGACATTGCTGCTGCAACAAATAATTTTTCT GACGACAACATGCTCGGACAAGGTGGCTTCGGAAAGGTTTATAAGGGCATGCTGGGTGAT AACAAAGAAGTGGCAATTAAAAGGCTTAGCAAGGGTTCTGGACAAGGAGTAGAAGAGTTC AGAAATGAAGTTGTTCTAATTGCCAAATTGCAGCACAGGAACCTCGTTAAACTTCTTGGC TGTTGCATACATGGAGATGAGAAGCTGCTAATTTATGAATACTTGCCAAACAAAAGCTTG GAAGCTTTCATTTTCGATCCTGCAAGTAAGTATGCTCTTGATTGGCCAACAAGGTTTAAG ATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGACTCAAGGTTGACAATA ATTCATAGAGATCTCAAATCAAGCAACATCTTGTTGGATGTGGATATGAGCCCTAAGATA TCTGATTTTGGTATGGCAAGAATCTTCGGTGGCAACCAGCAAGAAGCCAATACTAACCGA GTTGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGGATGGCGCCTTTTCAGTC AAGTCCGACACATATAGCTATGGTGTTATACTCTTGGAGATTGTAAGTGGTCTGAAGATT AGCTTACCTCGGCTGATGGACTTTCCCAACCTATTAGCTTATGCATGGAGCTTATGGAAG GATGACAAGGCCATGGATTTGGTGGATTCATCCATTGCTGAGAGTTGCTCAAAAATGGAA GTTTTACTATGTATCCACATAGGGCTGTTGTGCGTGCAAGATAATCCAAATAATAGGCCA CCCATGTCTTCTGTTGTTTTCATGTTAGAGAATGAAGCTGCAGCGCTTCCAGCTCCAATA CAACCTGTGTATTTTGCACATAGGGCCTCTGGAGCCAAACAATCAGGAGGAAATACCAGC AGCTCTAATAATAACATGAGCCTCACGGTATTAGAAGGACGGTAG

Peptide Sequence

PEP ID	Os04t0633200-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:32223116:32226952:-1 gene:Os04g0633200 transcript:Os04t0633200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0613A10.1 protein. (Os04t0633200-00)
Sequence	MQGKKESTVMEAATTNIFYRPVIFFSVLLCFQYRAAGVASDTLSNGRNLTDGDTLVSANG SFTLGFFSPGLPSRRYLAIWFSESADAVWVANRDSPLNDTAGVVVIDGTGGLVLLDGAAG QAAWSSNTTGSSPSVAVQLLESGNLVVRDQGSGDVLWQSFDNPSNTLIAGMRLGRNPRTG AEWSLTSWRAPDDPATGGCRRVMDTRGLADCVSWCGAGKKYRTGPWNGLWFSGVPEMASY SSMFANQVVVKPDEIAYVFTAATAAAPFSRLVLSEAGVIQRLVWDPSSKGWNTFAQAPRD VCDDYAKCGAFGLCNVNTASTLFCSCMAGFSPMFPSQWSMRETSGGCRRNAPLECGNGST TDGFVPVRGVKLPDTDNATVDTGATLDECRARCFANCSCVAYAAADIRGAGGGSGCVMWT VNNKKRTVIKVLLPVTAACLLLLMSMFLVWLRKCRGKRQNKVVQKRMLGYLSALNELGDE NLELPFVSFGDIAAATNNFSDDNMLGQGGFGKVYKGMLGDNKEVAIKRLSKGSGQGVEEF RNEVVLIAKLQHRNLVKLLGCCIHGDEKLLIYEYLPNKSLEAFIFDPASKYALDWPTRFK IIKGVARGLLYLHQDSRLTIIHRDLKSSNILLDVDMSPKISDFGMARIFGGNQQEANTNR VVGTYGYMSPEYAMDGAFSVKSDTYSYGVILLEIVSGLKISLPRLMDFPNLLAYAWSLWK DDKAMDLVDSSIAESCSKMEVLLCIHIGLLCVQDNPNNRPPMSSVVFMLENEAAALPAPI QPVYFAHRASGAKQSGGNTSSSNNNMSLTVLEGR

Transcript Sequence

Transcript ID	Os04t0633200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:32223116:32226952:-1 gene:Os04g0633200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0613A10.1 protein. (Os04t0633200-00)
Sequence	ATGCAAGGAAAAAAAGAATCAACAGTTATGGAAGCAGCAACCACCAACATTTTCTACCGT CCCGTCATCTTCTTCTCCGTGCTCCTTTGTTTCCAATACCGTGCCGCCGGCGTTGCATCG GACACGCTCAGCAATGGCCGCAACCTCACTGATGGCGACACGCTCGTGTCAGCCAATGGC TCCTTCACTCTGGGGTTCTTCTCACCCGGCTTGCCAAGCAGGAGATACCTCGCGATATGG TTCTCCGAGTCGGCGGACGCCGTCTGGGTGGCCAACCGCGACAGCCCACTGAACGACACC GCCGGCGTAGTGGTTATCGATGGCACGGGCGGGCTCGTCCTGCTCGACGGCGCCGCCGGC CAGGCCGCCTGGTCGTCGAACACGACTGGCTCGTCTCCATCGGTGGCGGTGCAGCTGCTC GAGTCTGGGAACCTCGTCGTGCGCGACCAGGGCAGCGGCGACGTGCTGTGGCAGTCGTTC GACAACCCGTCGAACACCCTGATCGCCGGCATGAGGCTCGGCAGGAACCCACGGACCGGC GCCGAGTGGTCCCTCACGTCGTGGCGCGCGCCCGACGACCCGGCGACGGGGGGCTGCCGC CGCGTGATGGACACGAGAGGGCTAGCGGACTGCGTCTCGTGGTGCGGCGCCGGCAAGAAG TACCGCACGGGGCCATGGAACGGGCTGTGGTTCAGCGGTGTCCCGGAGATGGCATCGTAC TCGTCCATGTTCGCGAACCAGGTGGTGGTCAAGCCCGACGAGATCGCCTACGTCTTCACC GCCGCCACCGCCGCGGCCCCCTTCTCCCGCCTCGTGCTGAGTGAGGCCGGCGTGATCCAG CGCCTCGTGTGGGATCCCAGCAGCAAGGGGTGGAACACGTTCGCGCAGGCGCCGCGCGAC GTATGCGACGACTACGCCAAGTGCGGCGCGTTCGGGCTGTGCAACGTGAACACCGCGTCG ACGCTCTTCTGCAGCTGCATGGCGGGGTTCAGCCCGATGTTCCCCTCCCAGTGGTCCATG AGGGAGACCTCCGGTGGTTGCCGGAGGAACGCGCCGCTGGAGTGCGGCAACGGGAGCACC ACGGACGGGTTCGTGCCGGTGCGCGGCGTGAAGCTCCCCGACACGGACAACGCCACGGTG GACACGGGCGCCACGCTTGACGAGTGCAGGGCGAGGTGCTTCGCCAACTGTTCCTGCGTC GCCTACGCCGCCGCGGACATCCGAGGCGCCGGCGGCGGCAGCGGATGCGTGATGTGGACG GTTAACAATAAGAAGAGGACTGTGATAAAAGTTCTGCTCCCAGTTACAGCAGCATGTTTG CTTCTGCTGATGAGCATGTTCCTTGTGTGGTTACGCAAGTGCAGAGGCAAACGTCAGAAT AAGGTTGTCCAGAAAAGGATGCTAGGATACTTGAGTGCATTAAATGAACTTGGTGATGAA AATTTAGAACTCCCGTTTGTCAGTTTTGGAGACATTGCTGCTGCAACAAATAATTTTTCT GACGACAACATGCTCGGACAAGGTGGCTTCGGAAAGGTTTATAAGGGCATGCTGGGTGAT AACAAAGAAGTGGCAATTAAAAGGCTTAGCAAGGGTTCTGGACAAGGAGTAGAAGAGTTC AGAAATGAAGTTGTTCTAATTGCCAAATTGCAGCACAGGAACCTCGTTAAACTTCTTGGC TGTTGCATACATGGAGATGAGAAGCTGCTAATTTATGAATACTTGCCAAACAAAAGCTTG GAAGCTTTCATTTTCGATCCTGCAAGTAAGTATGCTCTTGATTGGCCAACAAGGTTTAAG ATAATCAAAGGAGTAGCTAGAGGACTTCTTTATCTCCACCAAGACTCAAGGTTGACAATA ATTCATAGAGATCTCAAATCAAGCAACATCTTGTTGGATGTGGATATGAGCCCTAAGATA TCTGATTTTGGTATGGCAAGAATCTTCGGTGGCAACCAGCAAGAAGCCAATACTAACCGA GTTGTTGGAACATATGGTTACATGTCTCCTGAATATGCAATGGATGGCGCCTTTTCAGTC AAGTCCGACACATATAGCTATGGTGTTATACTCTTGGAGATTGTAAGTGGTCTGAAGATT AGCTTACCTCGGCTGATGGACTTTCCCAACCTATTAGCTTATGCATGGAGCTTATGGAAG GATGACAAGGCCATGGATTTGGTGGATTCATCCATTGCTGAGAGTTGCTCAAAAATGGAA GTTTTACTATGTATCCACATAGGGCTGTTGTGCGTGCAAGATAATCCAAATAATAGGCCA CCCATGTCTTCTGTTGTTTTCATGTTAGAGAATGAAGCTGCAGCGCTTCCAGCTCCAATA CAACCTGTGTATTTTGCACATAGGGCCTCTGGAGCCAAACAATCAGGAGGAAATACCAGC AGCTCTAATAATAACATGAGCCTCACGGTATTAGAAGGACGGTAG