Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0631000-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:32131925:32135388:1 gene:Os04g0631000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0105C05.4 protein. (Os04t0631000-00)
Sequence

ATGTCAGCGGTTGAGATGAAGACGGCGTGCGTGACCGGCGGGAACGGGTATATCGCTTCG
GCGCTCATCAAGATGCTGCTTCAGAAGGGATATGCTGTCAACACGACGGTCAGAAACCCA
GATGACATGAAGAAGACTTCCCATCTCAAGGACTTGGAAGCACTAGGCCCCTTGGAGGTC
TTCCGCGCTGACATGGACGAAGAAGGCAGCTTCGACGATGCCGTTGCCGGCTGCGATTAC
GCCTTCCTCGTCGCCGCTCCGGTGAATTTCCAGTCACAGAATCCTGAGAAAGAGCTTATT
GAAGCCGGCGTCCAAGGAACCATGAATGTGATGAGGTCGTGCGTGAGAGCCGGCACGGTG
AAGCGCGTGATCCTCACATCGTCGGCGCCCGCCGTCTCCGGCAGGCCGCTGCAAGGCGAC
GGCCATGTCCTGGACGAGGATTCCTGGTCCGACGTCGAGTACCTGACGAAAGAGAAGCCA
CCAGCTTGGGCGTATAGTGTCTCAAAGGTGCTCATGGAGAAGGCAGCATGCAAATTAGCG
GAGGAGAACAACATCAGCCTCATCACCGTGTTCCCGGTGTTCACTTTGGGTGCAGCGCCG
ACGCCGACGGCCGCAACAAGCGTCTCAGCTATGCTCTCCTTGCTATCTAGTGATGAGACG
CAGCTAAAAACCCTGAAAGGCCTGGCAGCAACCGGCCCCATTCCGACAGTTCACGTGGAC
GACCTCTGCCGCGCCGAGGTATTCGTCGCCGAGAAGGAGTCGGCGTCGGGGAGGTACATC
TGCAGCAGCCTCAGCACCACCGTCGTGGCATTCGCCCGTTTCGTGGCAGGAAAGCACCCT
CGGTACAACGTCAAAACTGACGGCTTCCAAGGGTTCCCTGAGAAGCCGAGAGTGTGCTAT
TCGTCGGAGAAGCTGGTGAGGGAAGGGTTCGAGTTCAAGTGGACGGATCTGGACGAGGTA
TTTGACGACCTCATCGAGTATGGCAAGGTCCTGGGGATTCTACCGCAATGA

Peptide Sequence

PEP ID

Os04t0631000-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:32131925:32135388:1 gene:Os04g0631000 transcript:Os04t0631000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0105C05.4 protein. (Os04t0631000-00)
Sequence

MSAVEMKTACVTGGNGYIASALIKMLLQKGYAVNTTVRNPDDMKKTSHLKDLEALGPLEV
FRADMDEEGSFDDAVAGCDYAFLVAAPVNFQSQNPEKELIEAGVQGTMNVMRSCVRAGTV
KRVILTSSAPAVSGRPLQGDGHVLDEDSWSDVEYLTKEKPPAWAYSVSKVLMEKAACKLA
EENNISLITVFPVFTLGAAPTPTAATSVSAMLSLLSSDETQLKTLKGLAATGPIPTVHVD
DLCRAEVFVAEKESASGRYICSSLSTTVVAFARFVAGKHPRYNVKTDGFQGFPEKPRVCY
SSEKLVREGFEFKWTDLDEVFDDLIEYGKVLGILPQ

Transcript Sequence

Transcript ID

Os04t0631000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:32131925:32135388:1 gene:Os04g0631000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0105C05.4 protein. (Os04t0631000-00)
Sequence

GAACTATCGTCGTCCTAGCTAGTTCTCAGGCGGACTGGGAGGGGTCGAAGTAGGCGGCGT
GTCCTCCCGACGAGATGTCAGCGGTTGAGATGAAGACGGCGTGCGTGACCGGCGGGAACG
GGTATATCGCTTCGGCGCTCATCAAGATGCTGCTTCAGAAGGGATATGCTGTCAACACGA
CGGTCAGAAACCCAGATGACATGAAGAAGACTTCCCATCTCAAGGACTTGGAAGCACTAG
GCCCCTTGGAGGTCTTCCGCGCTGACATGGACGAAGAAGGCAGCTTCGACGATGCCGTTG
CCGGCTGCGATTACGCCTTCCTCGTCGCCGCTCCGGTGAATTTCCAGTCACAGAATCCTG
AGAAAGAGCTTATTGAAGCCGGCGTCCAAGGAACCATGAATGTGATGAGGTCGTGCGTGA
GAGCCGGCACGGTGAAGCGCGTGATCCTCACATCGTCGGCGCCCGCCGTCTCCGGCAGGC
CGCTGCAAGGCGACGGCCATGTCCTGGACGAGGATTCCTGGTCCGACGTCGAGTACCTGA
CGAAAGAGAAGCCACCAGCTTGGGCGTATAGTGTCTCAAAGGTGCTCATGGAGAAGGCAG
CATGCAAATTAGCGGAGGAGAACAACATCAGCCTCATCACCGTGTTCCCGGTGTTCACTT
TGGGTGCAGCGCCGACGCCGACGGCCGCAACAAGCGTCTCAGCTATGCTCTCCTTGCTAT
CTAGTGATGAGACGCAGCTAAAAACCCTGAAAGGCCTGGCAGCAACCGGCCCCATTCCGA
CAGTTCACGTGGACGACCTCTGCCGCGCCGAGGTATTCGTCGCCGAGAAGGAGTCGGCGT
CGGGGAGGTACATCTGCAGCAGCCTCAGCACCACCGTCGTGGCATTCGCCCGTTTCGTGG
CAGGAAAGCACCCTCGGTACAACGTCAAAACTGACGGCTTCCAAGGGTTCCCTGAGAAGC
CGAGAGTGTGCTATTCGTCGGAGAAGCTGGTGAGGGAAGGGTTCGAGTTCAAGTGGACGG
ATCTGGACGAGGTATTTGACGACCTCATCGAGTATGGCAAGGTCCTGGGGATTCTACCGC
AATGA