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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0629500-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:32019411:32021017:-1 gene:Os04g0629500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin 15 description:Similar to Thioredoxin h. (Os04t0629500-01);Similar to Thioredoxin h. (Os04t0629500-02)
Sequence

ATGGAGATCCAGCAGCAGAAGGGGGTTGGCAATTCCAAAGTTGTGAAGGTTGAGAAGGAG
GAGTCATGGGATCTGTTCGTCAATCAAGCAAGCAACGAAGGCCACCCTGTTGTTGCCCAC
TTTGGGGCTTCATGGTGTGTGACTTCGCTGTCCATGAACTACAAGTTTGAGGAGCTAGCT
CAGACACACCCTGAGATACTGTTCCTCTATGTGGATGTTGATGATGTCCAGAGTGTTTCG
TCCAAGCTTGGAGTGAAGGCCATGCCGACATTTTTTCTCATCAAGGACAAGGAGGTGGTG
AACAAGATTGTTGGTGCCAACCCAGATGAGGTCAAGAAGATGGTGGACGCTTCTGCTGAG
TCCTTTGGAGTTACTGCTCCTCCTGATATAGTGGTGGAATAG

Peptide Sequence

PEP ID

Os04t0629500-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:32019411:32021017:-1 gene:Os04g0629500 transcript:Os04t0629500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin 15 description:Similar to Thioredoxin h. (Os04t0629500-01);Similar to Thioredoxin h. (Os04t0629500-02)
Sequence

MEIQQQKGVGNSKVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELA
QTHPEILFLYVDVDDVQSVSSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMVDASAE
SFGVTAPPDIVVE

Transcript Sequence

Transcript ID

Os04t0629500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:32019411:32021017:-1 gene:Os04g0629500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Thioredoxin 15 description:Similar to Thioredoxin h. (Os04t0629500-01);Similar to Thioredoxin h. (Os04t0629500-02)
Sequence

GATTGCCACTTCTCTTTCCTGTAGACAGTCTGTGATAATTTTGTTCTCTTCTTGTTGGGG
TCTTGGGGAAAGGAGCAAGGAGGAGGAGGAGACCAAGAACACGGAGTGAAAGGGAGAGGG
TTCTGTTCTTGCTTCTTAGGCCATATGGAGATCCAGCAGCAGAAGGGGGTTGGCAATTCC
AAAGTTGTGAAGGTTGAGAAGGAGGAGTCATGGGATCTGTTCGTCAATCAAGCAAGCAAC
GAAGGCCACCCTGTTGTTGCCCACTTTGGGGCTTCATGGTGTGTGACTTCGCTGTCCATG
AACTACAAGTTTGAGGAGCTAGCTCAGACACACCCTGAGATACTGTTCCTCTATGTGGAT
GTTGATGATGTCCAGAGTGTTTCGTCCAAGCTTGGAGTGAAGGCCATGCCGACATTTTTT
CTCATCAAGGACAAGGAGGTGGTGAACAAGATTGTTGGTGCCAACCCAGATGAGGTCAAG
AAGATGGTGGACGCTTCTGCTGAGTCCTTTGGAGTTACTGCTCCTCCTGATATAGTGGTG
GAATAGATATATAGATGTTGCCTTTATCTTCAGAAACTTCTCTGTGACCGTGGGTGCTTC
TTGGTCAGGTCCGGAAAAATGCGTCCATGTGTACATTCTAGCTTTGCTCCTGTGACTCTG
AATGGTGTCCCTTTGAACTGATAGGCTTGTGCCTTGCGGTAGTTTGTTCTGCAGGCTGCA
GCTGTGGCTTTACCATGCTCTATGAAATTTACTTACATGTGTTTCCAGTTGAAAAATATG
TGGTTCAGACTTCAGAGTTTAGACTAAAAAGATTTGTTGACAG