Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0628400-04
CDS Infomation	cds chromosome:IRGSP-1.0:4:31977268:31981092:-1 gene:Os04g0628400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-01);Similar to Transposase-related protein b-gary. (Os04t0628400-02);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-03);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-04)
Sequence	ATGGATCATGATTCACTCCAAAACACTATGGAGCATCCTGTTCCTGGAGAGGAGCATGAG GAGGATAACAGCATGAAAGTGGATGTGGCATTTGATGGAGTGCACAGCCCGTTCCGGTAC AGGCACAAGAAAAGGTCCAAGGTTTGGGAGGAGTACAAGCCCATCTTTCTGAATGGGAAG GTTCAGTTTGCGGAGTGTCTCTACTGCCATAATCGCCTCAGCTGCAAAGATTCCAACGGC ACAAGCCATCTATGGCGGCATCAGAAAATCTGCCCTGGCAAGGAGGAAGCGGCGCAGAGG CGACAGAAGGATTCCTACTTCCCATGCGTTTTGGTGAATGAGAACGATCCAGTTTCACCC CACGATCCGGTCAATGATGTTATTACAGAGACGCTTAGTGATATAAACTCGGTAACACCC AGCGGTAACAGATTCACGTCAAAGGTGTGGAAGGAGTTTACACCTGTCTATATTGAGGGG AAACTCCAGGCTGCAGATTGCATTCACTGCCAGAAGCGCCTCAGTGCGAATAAGTTCGGG GGGAGAAGCCATCTGAGTCGACATCTTATAACCTGTGCAGGACGACGTGGACGTGGAGGG GGCCAAATTCATCAGAAGGGTTTATTTTATCCTTCTAGCGTGCCTAGTTTGAAGTCCAGG GTGCAAGATGAGCTCTCACCTGCCTTGACAAATGGGAAGGTTCAGATCGCAGAATACTCT AGCAAGCTTCTGAGGGCAAGTAGCTCTGGTGACTCGACCCCTAAGCCCATTCGAGTGGTA CCAGCAGAGCATTCCGTGCCGACTCCAGATTATACAAGCCTGATGAAACAGAGGACCTCA TTTGTGACCACTCCAGCTGGTCAGGAAACATCTGATCCAGACCTAGTCGGGATGATAGCT TTGCATGGTTATCCTTTGTCAATTGTGGAGCACGAAGAAATGATGAGATTTGTAAAGAAA CTCAACCCTGTGGTCAATTTAGTCTCTCGCAATGCTATGGAAGAACATTGCTTGACACTA TTTCAGAAGGAAAAGGAAAATATAAAGGGTAAAATTGCACATTTTTCCCGACGTGTCTCT CTGTCAGCAAGCATCTGGACTCCTGATGGACCTGAGACAACAGTAAATTACCTCTGTTTG ACAGCACATTATATTGATGAAGACTGGAAAGTTCATAGGATAATAATAAAATTTGGAATG TTTTGGTCCGCGCCTGCTGATTTGGAAAGGATGATACATTGTATGGAAGCCTGTGTCCCA GAGTCTGAGAGCGGATCATATAATGTCATATTGGATGCCATTAGAGATTGGAATCTTGAT CAGAAGCTTTTAAGCTTGACTTCTGTTGGTGAAGTTAGGGGTGACACCAATACTTCATTG CTAAAGGAAATGCTTATAGAGAAGAAGTGCCTTCCTATTGGAGGGACGCTATTCAATGTT GCCTGTGTGGACTATGTCCTTAACAGTATTGTTTTCAAAGTGCAAGCAGATATACTTCGT CTTGTTGGTGACATAGTAATGGATTTTTTAGTGTCATTGACCCAGCAGCAGCTTCTGGAA GTTATTTCACAGACGGGTCTAAAGTGTCCACAAGAAGATGCTAAGTGGTGGCACAAACTT TATTTTAGACTTGAAGTGCTTTTGCATTTCAAGAAGTCATTTCCTTCTGAAGAAAGGGTG TCCCCAGAAGATACAAAAACTGCTGAGTCCGTTTGCAAGATTTTGAGGACAATTTATCGT GTCATTGAAGTTATTTCCAGCCCTAGCTCTCCGACAGCAAATATATATTTTAACGAGATA TGGAAAGTCAGGACAGTTTTGCAAGAAGAAGCATTAAATGATCACAGAGAAATAGCTACA GTGGCTATGGTGATGCAGGAAGCATTCAATGAGTATTGGCAAAATTCATATTTGTGGTTG GCCATACCTGTTGTGCTAGACCCTAGATTCAAATTCAGTTTCATTGAGTTTCGTCTGAAA CGAGCTTTTGGAACAGATTCGGCAAGCTACCTATCTGTAATACGTGAAACAGTCCGGGAA CTCTTCAATGAATACTGCCATTCTTTGAATCAGGCAAGTGATGTTGTTTCAAACAGTGAA GCTTTGTGTGCAGATGATAATGATTCGTTGGAAGATTGGGATCAGCATCTCCATGAACAA GCAAGTCGTCAGCTATCTTCGGAGCTTGATGATTACCTTGAAGATGGTTTAGTTCCTAGA AAGGATGATTTTGATATTTTAAACTGGTGGATGACTCATAGTACTAAGTACCCAACACTT GCAACTATTGCACGGGACATCTTAGCCATGCCAGCATCTGCTGTTCAATCTGAAGCAGCA TTCAGTAGCAGTGGACCAGTAATTCCAAAGCACCAGAGTACATTAAACATCAGAACAATC GAGGCACTTGTTTGTACTCGAGATTGGATGAGATAA

Peptide Sequence

PEP ID	Os04t0628400-04
PEP Infomation	pep chromosome:IRGSP-1.0:4:31977268:31981092:-1 gene:Os04g0628400 transcript:Os04t0628400-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-01);Similar to Transposase-related protein b-gary. (Os04t0628400-02);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-03);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-04)
Sequence	MDHDSLQNTMEHPVPGEEHEEDNSMKVDVAFDGVHSPFRYRHKKRSKVWEEYKPIFLNGK VQFAECLYCHNRLSCKDSNGTSHLWRHQKICPGKEEAAQRRQKDSYFPCVLVNENDPVSP HDPVNDVITETLSDINSVTPSGNRFTSKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFG GRSHLSRHLITCAGRRGRGGGQIHQKGLFYPSSVPSLKSRVQDELSPALTNGKVQIAEYS SKLLRASSSGDSTPKPIRVVPAEHSVPTPDYTSLMKQRTSFVTTPAGQETSDPDLVGMIA LHGYPLSIVEHEEMMRFVKKLNPVVNLVSRNAMEEHCLTLFQKEKENIKGKIAHFSRRVS LSASIWTPDGPETTVNYLCLTAHYIDEDWKVHRIIIKFGMFWSAPADLERMIHCMEACVP ESESGSYNVILDAIRDWNLDQKLLSLTSVGEVRGDTNTSLLKEMLIEKKCLPIGGTLFNV ACVDYVLNSIVFKVQADILRLVGDIVMDFLVSLTQQQLLEVISQTGLKCPQEDAKWWHKL YFRLEVLLHFKKSFPSEERVSPEDTKTAESVCKILRTIYRVIEVISSPSSPTANIYFNEI WKVRTVLQEEALNDHREIATVAMVMQEAFNEYWQNSYLWLAIPVVLDPRFKFSFIEFRLK RAFGTDSASYLSVIRETVRELFNEYCHSLNQASDVVSNSEALCADDNDSLEDWDQHLHEQ ASRQLSSELDDYLEDGLVPRKDDFDILNWWMTHSTKYPTLATIARDILAMPASAVQSEAA FSSSGPVIPKHQSTLNIRTIEALVCTRDWMR

Transcript Sequence

Transcript ID	Os04t0628400-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31977268:31981092:-1 gene:Os04g0628400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-01);Similar to Transposase-related protein b-gary. (Os04t0628400-02);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-03);Zinc finger, BED-type predicted domain containing protein. (Os04t0628400-04)
Sequence	GCCGATCCCCATCCGCCCCGCGAGCGAGCAGAGGCGGCGCTGCCGCTCGTCCTGCTGCTT CCGCCGCATCCACATCCTTCGCCGCCGCCGCCGCCGCCTGCGCCGATCCCCCCATCCATC CCGCGAGCGAGCATCCTGCTGCTTCCGCCGCATCCTGAAATTTGGCTTAACCTTGATGTT TGTTTGTTCCCAAAAAGTTTGGGGGTGTTGAACTGAACCCCCCATGCCCCATGTTAGATC CGCCCATGAATGGATCATGATTCACTCCAAAACACTATGGAGCATCCTGTTCCTGGAGAG GAGCATGAGGAGGATAACAGCATGAAAGTGGATGTGGCATTTGATGGAGTGCACAGCCCG TTCCGGTACAGGCACAAGAAAAGGTCCAAGGTTTGGGAGGAGTACAAGCCCATCTTTCTG AATGGGAAGGTTCAGTTTGCGGAGTGTCTCTACTGCCATAATCGCCTCAGCTGCAAAGAT TCCAACGGCACAAGCCATCTATGGCGGCATCAGAAAATCTGCCCTGGCAAGGAGGAAGCG GCGCAGAGGCGACAGAAGGATTCCTACTTCCCATGCGTTTTGGTGAATGAGAACGATCCA GTTTCACCCCACGATCCGGTCAATGATGTTATTACAGAGACGCTTAGTGATATAAACTCG GTAACACCCAGCGGTAACAGATTCACGTCAAAGGTGTGGAAGGAGTTTACACCTGTCTAT ATTGAGGGGAAACTCCAGGCTGCAGATTGCATTCACTGCCAGAAGCGCCTCAGTGCGAAT AAGTTCGGGGGGAGAAGCCATCTGAGTCGACATCTTATAACCTGTGCAGGACGACGTGGA CGTGGAGGGGGCCAAATTCATCAGAAGGGTTTATTTTATCCTTCTAGCGTGCCTAGTTTG AAGTCCAGGGTGCAAGATGAGCTCTCACCTGCCTTGACAAATGGGAAGGTTCAGATCGCA GAATACTCTAGCAAGCTTCTGAGGGCAAGTAGCTCTGGTGACTCGACCCCTAAGCCCATT CGAGTGGTACCAGCAGAGCATTCCGTGCCGACTCCAGATTATACAAGCCTGATGAAACAG AGGACCTCATTTGTGACCACTCCAGCTGGTCAGGAAACATCTGATCCAGACCTAGTCGGG ATGATAGCTTTGCATGGTTATCCTTTGTCAATTGTGGAGCACGAAGAAATGATGAGATTT GTAAAGAAACTCAACCCTGTGGTCAATTTAGTCTCTCGCAATGCTATGGAAGAACATTGC TTGACACTATTTCAGAAGGAAAAGGAAAATATAAAGGGTAAAATTGCACATTTTTCCCGA CGTGTCTCTCTGTCAGCAAGCATCTGGACTCCTGATGGACCTGAGACAACAGTAAATTAC CTCTGTTTGACAGCACATTATATTGATGAAGACTGGAAAGTTCATAGGATAATAATAAAA TTTGGAATGTTTTGGTCCGCGCCTGCTGATTTGGAAAGGATGATACATTGTATGGAAGCC TGTGTCCCAGAGTCTGAGAGCGGATCATATAATGTCATATTGGATGCCATTAGAGATTGG AATCTTGATCAGAAGCTTTTAAGCTTGACTTCTGTTGGTGAAGTTAGGGGTGACACCAAT ACTTCATTGCTAAAGGAAATGCTTATAGAGAAGAAGTGCCTTCCTATTGGAGGGACGCTA TTCAATGTTGCCTGTGTGGACTATGTCCTTAACAGTATTGTTTTCAAAGTGCAAGCAGAT ATACTTCGTCTTGTTGGTGACATAGTAATGGATTTTTTAGTGTCATTGACCCAGCAGCAG CTTCTGGAAGTTATTTCACAGACGGGTCTAAAGTGTCCACAAGAAGATGCTAAGTGGTGG CACAAACTTTATTTTAGACTTGAAGTGCTTTTGCATTTCAAGAAGTCATTTCCTTCTGAA GAAAGGGTGTCCCCAGAAGATACAAAAACTGCTGAGTCCGTTTGCAAGATTTTGAGGACA ATTTATCGTGTCATTGAAGTTATTTCCAGCCCTAGCTCTCCGACAGCAAATATATATTTT AACGAGATATGGAAAGTCAGGACAGTTTTGCAAGAAGAAGCATTAAATGATCACAGAGAA ATAGCTACAGTGGCTATGGTGATGCAGGAAGCATTCAATGAGTATTGGCAAAATTCATAT TTGTGGTTGGCCATACCTGTTGTGCTAGACCCTAGATTCAAATTCAGTTTCATTGAGTTT CGTCTGAAACGAGCTTTTGGAACAGATTCGGCAAGCTACCTATCTGTAATACGTGAAACA GTCCGGGAACTCTTCAATGAATACTGCCATTCTTTGAATCAGGCAAGTGATGTTGTTTCA AACAGTGAAGCTTTGTGTGCAGATGATAATGATTCGTTGGAAGATTGGGATCAGCATCTC CATGAACAAGCAAGTCGTCAGCTATCTTCGGAGCTTGATGATTACCTTGAAGATGGTTTA GTTCCTAGAAAGGATGATTTTGATATTTTAAACTGGTGGATGACTCATAGTACTAAGTAC CCAACACTTGCAACTATTGCACGGGACATCTTAGCCATGCCAGCATCTGCTGTTCAATCT GAAGCAGCATTCAGTAGCAGTGGACCAGTAATTCCAAAGCACCAGAGTACATTAAACATC AGAACAATCGAGGCACTTGTTTGTACTCGAGATTGGATGAGATAAAACTGTGAACTGTTG AGATGGGTTGCATGCAGCTTTCGCCGGTGGAAGATTTCAGGCAGTGTATGATGGTGCTTC TGACCAAGGATAACCGCTCTGATGATCGAGCCCCAACATGGTGTATCAAGCATTTGGGAG CTGTTAAACTTCATTTCAGTCGAGATGTGTATGCATATAAATGTTACTCCCATCACCCCA TGCATTTGCCTGGTGTAGTGCAGATGTATGCCGTTGTTTAGCCAAAGTTCAGGTCAGCCC AGAGCCTTAGGTCAAGTAGGAACTAGGAGTTGTACGACGAGAATGTTGCAAATATCCTCT GTTATGAGCAATTAATCTGTGTTATGTGCAGCCT