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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0627300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:31932864:31933709:1 gene:Os04g0627300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0303G06.2 protein. (Os04t0627300-00)
Sequence

ATGGAGAACAACACATCTCATTACTCTTCTTGCATTAGCCCAGCAGCTGAGACGTCGTCC
ATGTCAGCTGGAGAGAGCAGCTGGGCGATGCACATTGCGAACTTCTTGGCATCACCGTAC
AACAGCCAGGAGATGTGCCAGGAACCAGTGATCTCTGGCAGCAGCAGCTTCTCCTCTGGC
TTCTCTTCTTCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGATGATG
TGTGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGCTGCC
CCTAAGTTAACTAGCAACTTGAACAATGTTGATATGAAGTCAATGGCAACAATGGAGGCT
AAAGATATCAACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACAGCCG
GCGGCTGAAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTTGTAT
GAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGATAAAT
TACCTCGGATGA

Peptide Sequence

PEP ID

Os04t0627300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:31932864:31933709:1 gene:Os04g0627300 transcript:Os04t0627300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0303G06.2 protein. (Os04t0627300-00)
Sequence

MENNTSHYSSCISPAAETSSMSAGESSWAMHIANFLASPYNSQEMCQEPVISGSSSFSSG
FSSSFATSYDDASFITSEMMCDDDDDDDSLQDTACSSAAAPKLTSNLNNVDMKSMATMEA
KDINITQLAKYFVDASSRQPAAEVLQETVSVDNNNDKSLYECNELRKKGLCLVPLSMLIN
YLG

Transcript Sequence

Transcript ID

Os04t0627300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31932864:31933709:1 gene:Os04g0627300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0303G06.2 protein. (Os04t0627300-00)
Sequence

ACACATGGAGAACAACACATCTCATTACTCTTCTTGCATTAGCCCAGCAGCTGAGACGTC
GTCCATGTCAGCTGGAGAGAGCAGCTGGGCGATGCACATTGCGAACTTCTTGGCATCACC
GTACAACAGCCAGGAGATGTGCCAGGAACCAGTGATCTCTGGCAGCAGCAGCTTCTCCTC
TGGCTTCTCTTCTTCGTTTGCTACTTCCTATGACGACGCATCGTTCATCACGTCGGAGAT
GATGTGTGACGACGACGATGACGATGATTCCTTGCAGGACACTGCCTGTTCTTCTGCAGC
TGCCCCTAAGTTAACTAGCAACTTGAACAATGTTGATATGAAGTCAATGGCAACAATGGA
GGCTAAAGATATCAACATCACACAGCTGGCCAAGTATTTTGTCGATGCCAGTTCACGACA
GCCGGCGGCTGAAGTGCTTCAAGAAACAGTCAGTGTTGATAACAACAACGACAAGTCCTT
GTATGAATGTAATGAGCTGAGGAAGAAAGGGCTCTGCTTGGTCCCTCTCTCCATGTTGAT
AAATTACCTCGGATGATTGATTGTACTGTTAATGTGTACTGTCAGTATTCAGTTTAATTA
ATCGTATACAACGATAGTGTTCATATATCA