Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0627200-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:31927789:31928733:-1 gene:Os04g0627200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 1 description:Similar to H0303G06.1 protein. (Os04t0627200-00)
Sequence

ATGGCGCCGCTGAAGCCCCCGCCGCCGCGGCTCCTCCTCAACGGCGTCTCCTGCATGCGG
AACGCGCAGGCGGTGCTCCGCGACATCAACGTCAGCGTCCACGAACGGACGGCGCTGGTG
CTCACCGGCGCCAACGGCTCCGGCAAGAGCACCTTCCTGCGGATGCTCGCCGGCTTCTCG
CGCCCCTCGGCGGGGGAGGTCCTCTGGAACGGCCACGACATCACCTCCCCGGGCGTGTTC
CAGCAGTACAAGCTTCAGCTCAACTGGATGTCGCTCAAGGACGCCGTCAAGGAGAAGCTC
ACCGTGCTCGAGAACGTGCAGTGGTTCGAGCTCCTCGAGGGGAAGCACGGCAAGTCGGCC
CCGGCCATCGAGCTCATGGGGCTCGGCAGGCTCATGAACGAGAAGGCGAGGATGCTCTCC
ATGGGCCAGAGGAAGAGGCTCCAGCTCGCCAGGCTGCTCGCCATCGATCGCCCGATCTGG
CTCCTGGACGAGCCGTCCGTCGCGCTGGATGCCGAGGGTGTCAAGCTGCTGGAGTACATC
ATAGCGGAGCACCGCAAGAAGGGTGGGATCGTGTTCGTCGCCACGCATTTGCCCATCGAG
ATTGAGGATGCCATGTCGCTCCGGCTCCCGCAACGGTTCCCTCGGAGGAAAACTTTGGTT
GATCTTGTGCGTTGA

Peptide Sequence

PEP ID

Os04t0627200-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:31927789:31928733:-1 gene:Os04g0627200 transcript:Os04t0627200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 1 description:Similar to H0303G06.1 protein. (Os04t0627200-00)
Sequence

MAPLKPPPPRLLLNGVSCMRNAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFS
RPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAVKEKLTVLENVQWFELLEGKHGKSA
PAIELMGLGRLMNEKARMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVKLLEYI
IAEHRKKGGIVFVATHLPIEIEDAMSLRLPQRFPRRKTLVDLVR

Transcript Sequence

Transcript ID

Os04t0627200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31927789:31928733:-1 gene:Os04g0627200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER I FAMILY MEMBER 1 description:Similar to H0303G06.1 protein. (Os04t0627200-00)
Sequence

CACTCACCACGACACTCCCCCCCACTTCGTCGTCTCCGCGCGCCGCCGCCGCCGCCGCCG
TCGCGCGGCGCACCAAGCCACCAATCCTCCCGCCCCCCACCACCGCGGCGCCGAGCCCGC
GCGCGCGCGGGGCTGAAATGGCGCCGCTGAAGCCCCCGCCGCCGCGGCTCCTCCTCAACG
GCGTCTCCTGCATGCGGAACGCGCAGGCGGTGCTCCGCGACATCAACGTCAGCGTCCACG
AACGGACGGCGCTGGTGCTCACCGGCGCCAACGGCTCCGGCAAGAGCACCTTCCTGCGGA
TGCTCGCCGGCTTCTCGCGCCCCTCGGCGGGGGAGGTCCTCTGGAACGGCCACGACATCA
CCTCCCCGGGCGTGTTCCAGCAGTACAAGCTTCAGCTCAACTGGATGTCGCTCAAGGACG
CCGTCAAGGAGAAGCTCACCGTGCTCGAGAACGTGCAGTGGTTCGAGCTCCTCGAGGGGA
AGCACGGCAAGTCGGCCCCGGCCATCGAGCTCATGGGGCTCGGCAGGCTCATGAACGAGA
AGGCGAGGATGCTCTCCATGGGCCAGAGGAAGAGGCTCCAGCTCGCCAGGCTGCTCGCCA
TCGATCGCCCGATCTGGCTCCTGGACGAGCCGTCCGTCGCGCTGGATGCCGAGGGTGTCA
AGCTGCTGGAGTACATCATAGCGGAGCACCGCAAGAAGGGTGGGATCGTGTTCGTCGCCA
CGCATTTGCCCATCGAGATTGAGGATGCCATGTCGCTCCGGCTCCCGCAACGGTTCCCTC
GGAGGAAAACTTTGGTTGATCTTGTGCGTTGATGTGGGGTCAAGAATTCAGCTGTATGAT
TCTAATTCATCTCCATTCATATGAAATCCGTTGGAACAACTTCTTGATGGTTCAGTTTTG
TGACACTTTCTTTCGGAAATTAACAATGCACTCACCATTTGAATA