Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0625100-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:31777336:31780978:1 gene:Os04g0625100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0148A10.1 protein. (Os04t0625100-01);Similar to OSIGBa0148A10.1 protein. (Os04t0625100-02)
Sequence	ATGGACTTCACTGCCCCTTCCTTCTCCCTCGGCTCCGAGTTCGACGAGCCAGAGGAGGCG GTAGGGTATACGGCGCCCGATGCCCCGTCCTTCTCTCTCGGAATCGATTTCGAGGGCGAC GGCGACGAGTCCCACCTCACCGATGCCGGCAATGGAGGGGAGGAGCAGAAGCGTTATGAG GCTCCCGATGCGCCATCCTTCTCTGTCGGCATCGATTCCGGCAGCGACGGCGGTGAGGAG CGCCGCCGGGAGGAGCAACGGCGAAGTTACGAGGCTCCCGACGCGCCCTCCTTCTCCCTC GGTATCGACTCCGATGGCGACGGCGGCGACGAGCCCCACCTCACCAACGGAGGCCACCGG GAGGAGCAGCAGCGGCGTTACGAGGCGCCCGACGCGCCCTCTTTCTCCCTCGGCATCGAC TTCGGCGACGGCGACGACGAACCCCGCCTCCCCAACGCAAGCCGCCAAGCTCCGCGCTAC GAGGCGCCCGATGCACCCTCCTTCTCCCTCGGGTTCGATGACGACGAAGACGATGTTCTC ATCGGCGGCAGCCGTCACGAGCTCGGGACTGTCGAGGAGGAGGACGACGACTTCGTCCTC GCCGACGGCCAACAGCAACAGCAACGGCGGCACGAAACTGTTGTCCCCGACCCGGCGCCG CCGCCGCCAGAGATGAATCGATTCAAGCGGCTGCGGAGAGGCCCCGCGCCGCCATCTCAA GCGCCAACACCACCTCCTCATAGGACACCAGCGCCGGCTACGATGGAGGCTTCTCCGGTG GTGAGCTCGAAGGCCGTCTTGGGGGATATTGGGAGCTTTGAGGATGAGATCGAGGATTTC ACCGACGAGGAGAGATTCATGCGAGACGTACCGCCGTCTGTTGGTAGCTGCATCACTTCT AGCAGCTCAAGGTTCTCTCATGCCAGCAATTCAAAGTTCTCGCTGATGAACCATGGTGTC CTGATGAGCCAATCAACAAGTAAATCAAAGAAATTTGCACAAACACCTAATTATTCTGCT TCAAAATCTATGGAAGAAAGCAGCACCAAGAAACTGCTCCCTAAGACAGCATTGAGCCCA ATGAGGAAAATTCATTTGCTTGATTCAGATAGTGACTCGGATGATAACAAGGAAATGCCT GGTTTGCAGCAAAACTGCAAATCCAAAGTGAGCACTGTTCAACATAAGGGCAAGGCTGAG ATGAATGACAGTTGGGCGACACCTGCTCTTGATGAGTTCTGCAATGAGTATTTCAAATCC GTGGAAGACTCGAGACCATCTCAGCAGAAAGAAGGCAACAGTTTTTGTGGCCCCAAAGTC ATACGTTCTAACTACTCTGTTAGTGAAACTGGAGGACATTTTCCACATCAATCCACTCCA AGTGGGGCTGTACTAGAGGACAATCAGACAGATAGTCATCCTCCTGCAATGCATTATTTT TTCCACCATGACCAGTTGGTTCGTGACCTGGTCCGTCAAAGACTCAAGCATTTTGTTCCT GTTGGAGTAGACAGCAGAGGAAATGAGCAAGATGGAACACAAAATCTCCAGTACAGGAGT CAGACCGGCCGGTGTGCTGCTGAAAATGATCGGTGGGTGACTCCGAACAAGAGGATGCCT GTTGCAACTCAAGTTGGCAGAAGAAGAGTAAATCCTGCTGGAATGTCTGGCTCTGGCCAT TGGTTGACTGGAGACGATGGGAAGAAGGTCTATATCTCCAAAGATGGCCAGGAGTTAACT GGAAGGGTTGCTTACCGACAATACCAAAGGGAAAGTGGCAAGGGATTTCGCCAGTCGAAG AAGAAAAGTTCGGCTGGAACTAGAGCAAAGAAAGCCACTACTAAGGTGAAACAAGAGAAA ACTAGAGCAAAAAGAAAGCGCTGA

Peptide Sequence

PEP ID	Os04t0625100-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:31777336:31780978:1 gene:Os04g0625100 transcript:Os04t0625100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0148A10.1 protein. (Os04t0625100-01);Similar to OSIGBa0148A10.1 protein. (Os04t0625100-02)
Sequence	MDFTAPSFSLGSEFDEPEEAVGYTAPDAPSFSLGIDFEGDGDESHLTDAGNGGEEQKRYE APDAPSFSVGIDSGSDGGEERRREEQRRSYEAPDAPSFSLGIDSDGDGGDEPHLTNGGHR EEQQRRYEAPDAPSFSLGIDFGDGDDEPRLPNASRQAPRYEAPDAPSFSLGFDDDEDDVL IGGSRHELGTVEEEDDDFVLADGQQQQQRRHETVVPDPAPPPPEMNRFKRLRRGPAPPSQ APTPPPHRTPAPATMEASPVVSSKAVLGDIGSFEDEIEDFTDEERFMRDVPPSVGSCITS SSSRFSHASNSKFSLMNHGVLMSQSTSKSKKFAQTPNYSASKSMEESSTKKLLPKTALSP MRKIHLLDSDSDSDDNKEMPGLQQNCKSKVSTVQHKGKAEMNDSWATPALDEFCNEYFKS VEDSRPSQQKEGNSFCGPKVIRSNYSVSETGGHFPHQSTPSGAVLEDNQTDSHPPAMHYF FHHDQLVRDLVRQRLKHFVPVGVDSRGNEQDGTQNLQYRSQTGRCAAENDRWVTPNKRMP VATQVGRRRVNPAGMSGSGHWLTGDDGKKVYISKDGQELTGRVAYRQYQRESGKGFRQSK KKSSAGTRAKKATTKVKQEKTRAKRKR

Transcript Sequence

Transcript ID	Os04t0625100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31777336:31780978:1 gene:Os04g0625100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0148A10.1 protein. (Os04t0625100-01);Similar to OSIGBa0148A10.1 protein. (Os04t0625100-02)
Sequence	ATGCCGATCCCCTCCTGCTTCCTCTCTCAAATCTCCCTGCCGCAACCCTAGCCTCGCCGC CGCCGCCGCCGCCTCCGGCTCGCCGGCTCCCCCCTCCCCCGCGGATCCAAGCTATCCACC AAATCCCTCCCTCGCCGTCGCCGGCGGATGGACTTCACTGCCCCTTCCTTCTCCCTCGGC TCCGAGTTCGACGAGCCAGAGGAGGCGGTAGGGTATACGGCGCCCGATGCCCCGTCCTTC TCTCTCGGAATCGATTTCGAGGGCGACGGCGACGAGTCCCACCTCACCGATGCCGGCAAT GGAGGGGAGGAGCAGAAGCGTTATGAGGCTCCCGATGCGCCATCCTTCTCTGTCGGCATC GATTCCGGCAGCGACGGCGGTGAGGAGCGCCGCCGGGAGGAGCAACGGCGAAGTTACGAG GCTCCCGACGCGCCCTCCTTCTCCCTCGGTATCGACTCCGATGGCGACGGCGGCGACGAG CCCCACCTCACCAACGGAGGCCACCGGGAGGAGCAGCAGCGGCGTTACGAGGCGCCCGAC GCGCCCTCTTTCTCCCTCGGCATCGACTTCGGCGACGGCGACGACGAACCCCGCCTCCCC AACGCAAGCCGCCAAGCTCCGCGCTACGAGGCGCCCGATGCACCCTCCTTCTCCCTCGGG TTCGATGACGACGAAGACGATGTTCTCATCGGCGGCAGCCGTCACGAGCTCGGGACTGTC GAGGAGGAGGACGACGACTTCGTCCTCGCCGACGGCCAACAGCAACAGCAACGGCGGCAC GAAACTGTTGTCCCCGACCCGGCGCCGCCGCCGCCAGAGATGAATCGATTCAAGCGGCTG CGGAGAGGCCCCGCGCCGCCATCTCAAGCGCCAACACCACCTCCTCATAGGACACCAGCG CCGGCTACGATGGAGGCTTCTCCGGTGGTGAGCTCGAAGGCCGTCTTGGGGGATATTGGG AGCTTTGAGGATGAGATCGAGGATTTCACCGACGAGGAGAGATTCATGCGAGACGTACCG CCGTCTGTTGGTAGCTGCATCACTTCTAGCAGCTCAAGGTTCTCTCATGCCAGCAATTCA AAGTTCTCGCTGATGAACCATGGTGTCCTGATGAGCCAATCAACAAGTAAATCAAAGAAA TTTGCACAAACACCTAATTATTCTGCTTCAAAATCTATGGAAGAAAGCAGCACCAAGAAA CTGCTCCCTAAGACAGCATTGAGCCCAATGAGGAAAATTCATTTGCTTGATTCAGATAGT GACTCGGATGATAACAAGGAAATGCCTGGTTTGCAGCAAAACTGCAAATCCAAAGTGAGC ACTGTTCAACATAAGGGCAAGGCTGAGATGAATGACAGTTGGGCGACACCTGCTCTTGAT GAGTTCTGCAATGAGTATTTCAAATCCGTGGAAGACTCGAGACCATCTCAGCAGAAAGAA GGCAACAGTTTTTGTGGCCCCAAAGTCATACGTTCTAACTACTCTGTTAGTGAAACTGGA GGACATTTTCCACATCAATCCACTCCAAGTGGGGCTGTACTAGAGGACAATCAGACAGAT AGTCATCCTCCTGCAATGCATTATTTTTTCCACCATGACCAGTTGGTTCGTGACCTGGTC CGTCAAAGACTCAAGCATTTTGTTCCTGTTGGAGTAGACAGCAGAGGAAATGAGCAAGAT GGAACACAAAATCTCCAGTACAGGAGTCAGACCGGCCGGTGTGCTGCTGAAAATGATCGG TGGGTGACTCCGAACAAGAGGATGCCTGTTGCAACTCAAGTTGGCAGAAGAAGAGTAAAT CCTGCTGGAATGTCTGGCTCTGGCCATTGGTTGACTGGAGACGATGGGAAGAAGGTCTAT ATCTCCAAAGATGGCCAGGAGTTAACTGGAAGGGTTGCTTACCGACAATACCAAAGGGAA AGTGGCAAGGGATTTCGCCAGTCGAAGAAGAAAAGTTCGGCTGGAACTAGAGCAAAGAAA GCCACTACTAAGGTGAAACAAGAGAAAACTAGAGCAAAAAGAAAGCGCTGAATTCAAGAC GTGCTGGCCTCGTATTCACAGACGAGGTGGTGCCAATGTAATTAGTCAATGAGAAATCAT AGTCATTATTTGTTCAATCCATTTCATAAGGAGTTGTTAAAAACATAGAGCAGAGTAGAA TGACATGGTTTATGTCGGAGAATATAATCACATAACAAAGCTTCAACTGTTCTTCTTTGA TAAGGT