Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0625000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31769056:31773154:-1 gene:Os04g0625000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0625000-01)
Sequence	ATGAGCTCCAAGCACCGCTCCGCCGCCGCCGCCGCTGCTCCTGCGGCGGCGCCGCCGTCT GCTGTCCGGACGCCTCGAAGGCTGCGGAGGCGCCCGCTGAAGACGGCGTCGGGGTCCGGT GGCGGTGGCGGTGGCGGTGGGGGGCGGCGGAGCGGGCCCGCCACGCCGCTGCTCAAGTGG GATGTGGGGAATGGCGCGGAGAAGGGGGGTGGCGGCGGCGAGAAGGCAGGTGGCCCGTCG GAGAAGGCGGCTGCGGCGCGGGATGTGTCGGTGAGGAGGCTCGCGGCTGGAGTGTGGCGG CTGCGGCCGCCGGAGGCGGTGGCCGGGGGCGCCGCCGCGGGGAGCGGGGAGAGGAGGAGG GTTCACGTCGGCCTCGAGCATATCCCAAGACATCTACAAGTCCAGCTTATTAAACAGAAT AATTTGGTTCATCACCAAACCCTTAAGAATGAGATTTCAAGCCCAATTTCTGTTTTGGAA CGAAAGAGTGGAGAGCTCCATAAGGTACCGCTTCATGCTGCTACAGCTGTGCTACCAGTC ACCGCTATGGAGAAGGCAACAAAATGGGAGCCAGAGAGCTTGGAGGGAATGGAAGCACAT GATGCCTATCTGATAGCTAGTCAACTAAATCTTCTCAACGAGCAGCAAGATGCAACTTAT GTTGCTAACCTCCAGATGGAGCTCCAGCAAGCACGTGATCGGGTAAGTGAACTGGAAACC GAGCGACGTGCGGCTAAGAAGAAGCTGGATCACTTGTTCAAGAAACTTGCAGAGGAAAAG GCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGCGCGCAATTCTTGAAGATATGAAGGCA GATCTTGACCATGAGAAGAAAAACAGGAGACGCCTGGAGATGATTAACTTGAAGCTTGTC AATGAGTTGAAGGAAGCCAAGATGTCAGCAAAGCAGCTACTGCAAGAATATGATAATGAG AGGAAAGCACGCGAGCTCACTGAGGAGGTGTGCAATGAACTGGCAAGGGAGGTGGAGGAA GACAAAGCCGAGATTGAAGCCTTGAAACATGATTCCCTCAAGCTGCGAGAGGAGGTTGAT GAGGAGCGCAAGATGCTACAGATGGCTGAGGTTTGGCGTGAAGAACGGGTGCAGATGAAG CTTGTTGATGCAAAACTTACTCTTGATGCCAAATACACACAATTGAGCAAACTGCAACAG GATGTTGAGGCTTTTATTGCTGCATGCAGTTGTGCTAGAGGAGACATTATGGTTGTGGAA GAAGCAGAGAACATAATACAGGCGATCAAATCTGTTAGAGCACAAGATATTGAATTCAGA TATGAGCCACCGGCACAATCAGAAGACATATTTTCCATTTTTGAAGAGCTGCGTCCAAGT GAAGAGCCTGTCATAAAGGAGATTGAGCCATGCTACAAGAACAACTCTGCTATGTGCGAA TCAGAAATCCAAGAGGCTAGCCCAATGACTGATATATTCCTGGAAAAGCCAACCAAGGTG TACTCAAGTAAAAGCCCTCAGAATGAGAGTGACACTGAAGATGGCAGCAGCTGGGAGACA ATAAGCCATGAAGATATGCAGGCTTCAAGTGGTTCACCGGATGGAAGTGAACCGTCAGTT AACAAGATCTGTGATGGAAGCATCTCTTGGACGAGCCGAAACGATTTTGAGTACAAGGAA GCTGAGAAACTGAAGGATGATTCGACTGATATATACCTGACAAACATGAACCAACCCAAG AAGAAAGAATCAGCCTTATCAAAGCTCTGGAAGTCGTCCCGTCCAAAGAACAATGACGTC TGCAAGAAAGATGCTGTGGAGACGATCAATGGAAGATCATCTAATGTTCGGCTATCCGTT GGGACCCATTCTACCATTGACAGTGGCATTCAAGAAATAGGCCTCAGCTCGCCGAGCATA GGGCAATGGAGCTCCCCGGATTCAATGAGCATGCAATTCAACCGGGGCTTCAAGGGCTGC ATGGAGTACCCACGGACATCCCAGAAGCACAGCCTGAAATCCAAGCTCATGGAGGCACGG ATGGAGAGCCAGAAGGTCCAGCTCCGGCAAGTGCTCAAGCAGAAGATCTAG

Peptide Sequence

PEP ID	Os04t0625000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31769056:31773154:-1 gene:Os04g0625000 transcript:Os04t0625000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0625000-01)
Sequence	MSSKHRSAAAAAAPAAAPPSAVRTPRRLRRRPLKTASGSGGGGGGGGGRRSGPATPLLKW DVGNGAEKGGGGGEKAGGPSEKAAAARDVSVRRLAAGVWRLRPPEAVAGGAAAGSGERRR VHVGLEHIPRHLQVQLIKQNNLVHHQTLKNEISSPISVLERKSGELHKVPLHAATAVLPV TAMEKATKWEPESLEGMEAHDAYLIASQLNLLNEQQDATYVANLQMELQQARDRVSELET ERRAAKKKLDHLFKKLAEEKAAWRSREHEKVRAILEDMKADLDHEKKNRRRLEMINLKLV NELKEAKMSAKQLLQEYDNERKARELTEEVCNELAREVEEDKAEIEALKHDSLKLREEVD EERKMLQMAEVWREERVQMKLVDAKLTLDAKYTQLSKLQQDVEAFIAACSCARGDIMVVE EAENIIQAIKSVRAQDIEFRYEPPAQSEDIFSIFEELRPSEEPVIKEIEPCYKNNSAMCE SEIQEASPMTDIFLEKPTKVYSSKSPQNESDTEDGSSWETISHEDMQASSGSPDGSEPSV NKICDGSISWTSRNDFEYKEAEKLKDDSTDIYLTNMNQPKKKESALSKLWKSSRPKNNDV CKKDAVETINGRSSNVRLSVGTHSTIDSGIQEIGLSSPSIGQWSSPDSMSMQFNRGFKGC MEYPRTSQKHSLKSKLMEARMESQKVQLRQVLKQKI

Transcript Sequence

Transcript ID	Os04t0625000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31769056:31773154:-1 gene:Os04g0625000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0625000-01)
Sequence	CTAATTTACCTCCCGTTTCCCAACGCCTCCTCACTAGCCAAGTAGCCAGCCACCCCCAAC GTCTCTCTCCCGTCCCTGCTTCTCCGCTCTCCTCTGCTGTTCAGCTCCACTGCGTGCGCG TCTCTCTCCCTGTCTTGTCTCCGAGCCGATGCCGCCGGAGCGCGCTCTCCACCCGAGCCG CACCCTCCGTCGCAGATGAGCTCCAAGCACCGCTCCGCCGCCGCCGCCGCTGCTCCTGCG GCGGCGCCGCCGTCTGCTGTCCGGACGCCTCGAAGGCTGCGGAGGCGCCCGCTGAAGACG GCGTCGGGGTCCGGTGGCGGTGGCGGTGGCGGTGGGGGGCGGCGGAGCGGGCCCGCCACG CCGCTGCTCAAGTGGGATGTGGGGAATGGCGCGGAGAAGGGGGGTGGCGGCGGCGAGAAG GCAGGTGGCCCGTCGGAGAAGGCGGCTGCGGCGCGGGATGTGTCGGTGAGGAGGCTCGCG GCTGGAGTGTGGCGGCTGCGGCCGCCGGAGGCGGTGGCCGGGGGCGCCGCCGCGGGGAGC GGGGAGAGGAGGAGGGTTCACGTCGGCCTCGAGCATATCCCAAGACATCTACAAGTCCAG CTTATTAAACAGAATAATTTGGTTCATCACCAAACCCTTAAGAATGAGATTTCAAGCCCA ATTTCTGTTTTGGAACGAAAGAGTGGAGAGCTCCATAAGGTACCGCTTCATGCTGCTACA GCTGTGCTACCAGTCACCGCTATGGAGAAGGCAACAAAATGGGAGCCAGAGAGCTTGGAG GGAATGGAAGCACATGATGCCTATCTGATAGCTAGTCAACTAAATCTTCTCAACGAGCAG CAAGATGCAACTTATGTTGCTAACCTCCAGATGGAGCTCCAGCAAGCACGTGATCGGGTA AGTGAACTGGAAACCGAGCGACGTGCGGCTAAGAAGAAGCTGGATCACTTGTTCAAGAAA CTTGCAGAGGAAAAGGCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGCGCGCAATTCTT GAAGATATGAAGGCAGATCTTGACCATGAGAAGAAAAACAGGAGACGCCTGGAGATGATT AACTTGAAGCTTGTCAATGAGTTGAAGGAAGCCAAGATGTCAGCAAAGCAGCTACTGCAA GAATATGATAATGAGAGGAAAGCACGCGAGCTCACTGAGGAGGTGTGCAATGAACTGGCA AGGGAGGTGGAGGAAGACAAAGCCGAGATTGAAGCCTTGAAACATGATTCCCTCAAGCTG CGAGAGGAGGTTGATGAGGAGCGCAAGATGCTACAGATGGCTGAGGTTTGGCGTGAAGAA CGGGTGCAGATGAAGCTTGTTGATGCAAAACTTACTCTTGATGCCAAATACACACAATTG AGCAAACTGCAACAGGATGTTGAGGCTTTTATTGCTGCATGCAGTTGTGCTAGAGGAGAC ATTATGGTTGTGGAAGAAGCAGAGAACATAATACAGGCGATCAAATCTGTTAGAGCACAA GATATTGAATTCAGATATGAGCCACCGGCACAATCAGAAGACATATTTTCCATTTTTGAA GAGCTGCGTCCAAGTGAAGAGCCTGTCATAAAGGAGATTGAGCCATGCTACAAGAACAAC TCTGCTATGTGCGAATCAGAAATCCAAGAGGCTAGCCCAATGACTGATATATTCCTGGAA AAGCCAACCAAGGTGTACTCAAGTAAAAGCCCTCAGAATGAGAGTGACACTGAAGATGGC AGCAGCTGGGAGACAATAAGCCATGAAGATATGCAGGCTTCAAGTGGTTCACCGGATGGA AGTGAACCGTCAGTTAACAAGATCTGTGATGGAAGCATCTCTTGGACGAGCCGAAACGAT TTTGAGTACAAGGAAGCTGAGAAACTGAAGGATGATTCGACTGATATATACCTGACAAAC ATGAACCAACCCAAGAAGAAAGAATCAGCCTTATCAAAGCTCTGGAAGTCGTCCCGTCCA AAGAACAATGACGTCTGCAAGAAAGATGCTGTGGAGACGATCAATGGAAGATCATCTAAT GTTCGGCTATCCGTTGGGACCCATTCTACCATTGACAGTGGCATTCAAGAAATAGGCCTC AGCTCGCCGAGCATAGGGCAATGGAGCTCCCCGGATTCAATGAGCATGCAATTCAACCGG GGCTTCAAGGGCTGCATGGAGTACCCACGGACATCCCAGAAGCACAGCCTGAAATCCAAG CTCATGGAGGCACGGATGGAGAGCCAGAAGGTCCAGCTCCGGCAAGTGCTCAAGCAGAAG ATCTAGAGTTGCCACGACCACCGAATAGGGAAAACATTGTAAGCCTAGAATTTAATCCAA GGAATAATTCCAAGAGTATTTCCATGCTTCATTTCTCTTGTTTTAGGGTAACTTGTAATG TATGCACTACAGTACTGAAGAAAAAGATCAGGTTGGCCTTTGTGGGCCAGCTGGAGCATT GCTGCTTCTGTATCTCACTGTAGTCCTGGTGATATTGATTCCATTTGATAGGCTACTGTG AGATCCATTATGATGTATAATATAGACATAAAGAAGCAGCAGTGTTCAGTC