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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0620600-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:31541994:31542752:-1 gene:Os04g0620600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA132 description:Similar to NOI protein. (Os04t0620600-01)
Sequence

ATGACGACGATGGACAAGGGCCGGGCGCTGCCCAAGTTTGGGGAGTGGGACGTGAAGAAT
CCGGCGTCGGCGGAGGGCTTCACGGTGATATTCCAGAAGGCTCGCGACGACAAGAAGACG
ACCGGCCCCGGGAACGCCAGGGTGGGGATACCGCCGGCCTTCCGGAGCACCGACGACGAC
GGCGGCTACAGGCCCGAATTCAAGCCCGCCGAGAGCTACCAGCAACACACGCCGCCCAAG
CGCGTCAAGAAGAAGTGGGCATTCTGCGCCGGGTGTTGA

Peptide Sequence

PEP ID

Os04t0620600-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:31541994:31542752:-1 gene:Os04g0620600 transcript:Os04t0620600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA132 description:Similar to NOI protein. (Os04t0620600-01)
Sequence

MTTMDKGRALPKFGEWDVKNPASAEGFTVIFQKARDDKKTTGPGNARVGIPPAFRSTDDD
GGYRPEFKPAESYQQHTPPKRVKKKWAFCAGC

Transcript Sequence

Transcript ID

Os04t0620600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31541994:31542752:-1 gene:Os04g0620600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA132 description:Similar to NOI protein. (Os04t0620600-01)
Sequence

CCCCCCCCCCGCGTCTATTTTTTACCTCCACTTCTGCTGGTTAAAGGCCTTTTTCTCCCT
CCTCCCTCGCGTCGTCCCCGGCGGCCGCCCGGGCGTCATTCTCGTCTCTCGGCCACCATG
ACGACGATGGACAAGGGCCGGGCGCTGCCCAAGTTTGGGGAGTGGGACGTGAAGAATCCG
GCGTCGGCGGAGGGCTTCACGGTGATATTCCAGAAGGCTCGCGACGACAAGAAGACGACC
GGCCCCGGGAACGCCAGGGTGGGGATACCGCCGGCCTTCCGGAGCACCGACGACGACGGC
GGCTACAGGCCCGAATTCAAGCCCGCCGAGAGCTACCAGCAACACACGCCGCCCAAGCGC
GTCAAGAAGAAGTGGGCATTCTGCGCCGGGTGTTGATTTTCTGGCTTCTGCTGCTGTTTT
TTCGGATGAGGCGGATCGCAATTATTCACAATTGCCGCACCAGAAGTATTCCTGATGGGA
GCAAGAGCAAAATAGGAGAGGAGGGGGGGGGGGGTGTTTCTGTGATCATGGTGTTCGATC
TCTTCACGTTTATTTGACCATGTTTCATATGAATACATTGCCCATTTGTATCG