Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0620200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31524614:31527861:1 gene:Os04g0620200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SETTING DEFECT1 description:Remorin protein, Grain setting (Os04t0620200-01)
Sequence	ATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTTTCTCCGACAAAGCTAAGG ATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGCAACAGCTCATCACGGACA TCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGACTATTAGTTTGTGATGTT CTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGCTCCTCAGCAATCAACAAA ACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAGGTTGAGGACATGACCAAA AGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATACATCCAGTTCGAACCATA GAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCTAGTACCAGTAGTTTCGAG TTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCAGGATATTTCTCGAGACAG ACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAATAAGCAAAATGTTCAACAA AATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAGATGAATTCAGCTGCAGGC AGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATTCCTCGCCCCATGCAGAAC ATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATATTAGAGAGGTTATCTTTT GGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGTACAGTTAATAATGCTGGT GTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCATCAATTGAAATAAGGCCC TACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCCGTGAGAGATGTGGGCACA GAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGAACTCCACTTGGATCAATG ACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCTGTAGGAGGACGGTCAACA GCATCACCAGGAGATGACAACACAGATGATGGACCATATTTCAACAGAAAAGGTGGCACA AATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAAGAAATTGCCGCCCTGGGT ATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAAGAGGAGCTAGAACTAGTC TCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAAGAATATGCAGCTCGTGCA GCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGATTCAAGAAGGAAGAGTTG AAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAATCTGAAATGAAGAGAATA GAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAGATGGCTGAAAAGCTAGAA ATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAATGCAAGGATGAACCAACAA GCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACAGGACGAGTTCCAGGGTCA TGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAG

Peptide Sequence

PEP ID	Os04t0620200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31524614:31527861:1 gene:Os04g0620200 transcript:Os04t0620200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SETTING DEFECT1 description:Remorin protein, Grain setting (Os04t0620200-01)
Sequence	MEYERIHKVQAGALSPTKLRMKLLGTHNRVRVISNSSSRTSPSKNTEPSQAQNRLLVCDV LEEAVSGSSDGSKCSSAINKTEALEKDPPLDINKVEDMTKSSVQQPASSNSSMIHPVRTI EEESNDCDSGIDNASTSSFEFHGGEKTAAQNPTSGYFSRQTSSKWNDAEKWIVNKQNVQQ NISKGAPQNQSAQQMNSAAGRGFIVPKISNRNIIPRPMQNMKRPSPASSASRSILERLSF GSHQPKLVRHADVCTVNNAGVTSEYQTKATDNSSSIEIRPYKDPKAIPAVHSVSVRDVGT EMTPIPSQDPSRTGTPLGSMTPTRSPNCSIPSTPVGGRSTASPGDDNTDDGPYFNRKGGT NEISDDEMRLKTRKEIAALGIQLGKMNIATWASKEELELVSASPSIADLERMKKEYAARA AAYEEAENFKHTARFKKEELKIEAWESLQKAKIESEMKRIEEHAEKLRSEAMAKMAEKLE MTRRLAEEKRASANARMNQQAAKAVHKAELIRQTGRVPGSCILCCSGCFCQH

Transcript Sequence

Transcript ID	Os04t0620200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31524614:31527861:1 gene:Os04g0620200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN SETTING DEFECT1 description:Remorin protein, Grain setting (Os04t0620200-01)
Sequence	CTAGTGTTCAGTGTTCTCTTCTCCCCCTCACTCTCTCCTGTCTCGCTCCCCCCTCCTTCC CCAGTCCCTCCATCTCACTCTCACCCACCAGAGTACCAGAGAAGCACAGAGACTCAGAGA GGGAGAGAGAGAGGAAGAATGGAGTATGAAAGGATTCACAAGGTTCAGGCTGGTGCACTT TCTCCGACAAAGCTAAGGATGAAGCTTCTGGGAACTCACAATCGTGTGAGGGTCATCAGC AACAGCTCATCACGGACATCACCTTCGAAGAACACTGAACCATCGCAAGCACAGAACAGA CTATTAGTTTGTGATGTTCTTGAAGAAGCAGTTTCAGGCAGCTCTGATGGATCCAAATGC TCCTCAGCAATCAACAAAACTGAAGCTTTAGAGAAGGATCCACCATTGGACATCAACAAG GTTGAGGACATGACCAAAAGTTCAGTTCAGCAACCTGCATCAAGCAACTCAAGCATGATA CATCCAGTTCGAACCATAGAAGAAGAGAGTAATGACTGTGATAGTGGTATTGACAATGCT AGTACCAGTAGTTTCGAGTTCCATGGAGGAGAGAAAACAGCAGCGCAGAATCCAACATCA GGATATTTCTCGAGACAGACTTCCTCCAAGTGGAATGATGCTGAGAAATGGATTGTTAAT AAGCAAAATGTTCAACAAAATATCTCTAAGGGCGCACCACAGAACCAGAGTGCACAGCAG ATGAATTCAGCTGCAGGCAGGGGTTTTATTGTGCCCAAAATTTCAAACCGAAACATAATT CCTCGCCCCATGCAGAACATGAAAAGACCGAGTCCAGCTTCTTCCGCTTCTCGAAGCATA TTAGAGAGGTTATCTTTTGGTTCACATCAACCAAAGTTGGTTAGGCATGCAGATGTCTGT ACAGTTAATAATGCTGGTGTCACCTCAGAGTATCAAACAAAGGCAACCGATAACAGTTCA TCAATTGAAATAAGGCCCTACAAAGATCCCAAAGCTATTCCTGCAGTTCATTCGGTGTCC GTGAGAGATGTGGGCACAGAAATGACTCCCATACCGAGTCAGGATCCTTCAAGGACAGGA ACTCCACTTGGATCAATGACACCAACTCGTAGCCCAAATTGCTCTATACCATCAACTCCT GTAGGAGGACGGTCAACAGCATCACCAGGAGATGACAACACAGATGATGGACCATATTTC AACAGAAAAGGTGGCACAAATGAAATATCAGACGATGAAATGAGATTGAAGACAAGGAAA GAAATTGCCGCCCTGGGTATACAACTAGGAAAGATGAACATTGCTACATGGGCTAGCAAA GAGGAGCTAGAACTAGTCTCTGCATCCCCAAGCATTGCTGATTTGGAGCGGATGAAGAAA GAATATGCAGCTCGTGCAGCAGCATATGAAGAAGCAGAAAATTTTAAGCATACAGCAAGA TTCAAGAAGGAAGAGTTGAAGATTGAAGCATGGGAGAGCCTTCAAAAAGCAAAAATAGAA TCTGAAATGAAGAGAATAGAGGAACATGCAGAGAAATTGCGAAGCGAAGCCATGGCGAAG ATGGCTGAAAAGCTAGAAATGACACGGCGTTTAGCTGAAGAGAAACGAGCCTCAGCCAAT GCAAGGATGAACCAACAAGCAGCAAAGGCGGTTCACAAGGCTGAGCTGATTCGCCAGACA GGACGAGTTCCAGGGTCATGTATCCTATGCTGCAGTGGTTGCTTCTGTCAACACTAGTGT ATGCTTGACAATTAGGGAGTTAAATATGGTCGTGAAAAATCTAAACCCCATGTTCTATAA TCAGCATTCCTTGGTTTTAGTATGGAAAGGAATGTCTGATACTTTGATTAGGTATTCAGA TGTACAAATTCTTGCTTGTCATAAAAGTCAATCCAATGCTTACATTTGCTTGGTCGGCTA CTCGGTTAAAGAACACTTGGTTGTTGCTCAACGAATTGAATCATTGGAAAATGACGAGCA TTTCTTGACT