Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0619700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31485367:31488482:-1 gene:Os04g0619700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 233 description:Similar to H0114G12.8 protein. (Os04t0619700-01)
Sequence	GTAGGATTTCATAATTTTATGGACTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCT GTGAATCGTTCATGCATTGTCACTGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCAC AACGGGAAAGCTAAACACTGGAATAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTAT GAATTACTTTCCGACCCAAAGAAAAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAG TGTGACTCATGGTGCTTCACTGATTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACAC CTCGATCCAAAGGAACTTGGCATTGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCC ACAGATCATCAGGGGTGGAAGAAGTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCA GTCACCCTCAATGGGCCCTTGGTTCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACA TTATTTGTGGAGCGGGAGTTTCGAAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTT CTCCGTGACCACAGTGAGGATGTACGCACTGTGTTCCTTCTAGCATCAGTAAATCTGATA TTTACTGGTGGTAATGACTCTGTGATCCGAATGTGGGACTTGGAGGAAGGGCTTTTGATT GATAAGTCCCGCCCACTTTGTTGCACCATCCGGGCCATTGCAGCTGACACTAGGCTTTTG GTCACTGCAGGAACCAATGCCTTTATTCATTGTTGGAGGGCTGTTGAAGGTAATTCTTAC CCTTTCCACATCTCTGGGAATGGCACTGACCAGAGTCCTGAGTTTCGCCTTTGGGGGCAT GAAGGACCTGTGACTTGTCTTGCCTTGGATTCATTGAGGATTTTCAGTGGTAGCTGGGAT ATGACTGTCCGTGTTTGGGACAGATCCGAAATGAAATGTGTTCAGAAGTTCATGCATGCA GATTGGGTTTGGAGCGTGGCACCTCATGGAAATACTGTTGCCAGTACAGCTGGTAGGGAT GCCTATGTATGGGATATCAGGAGTGGTGAGTTGGAAAATGTTATTTCCAATGCCCATTAT GGTAATGCATTTTCTTTAGCTCGAACACACCTAGCTGATGTGCTGTTTACCGGAGGAGAG GATGGGGCAATTCGCCTGTTCAATGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCA GCTGCTACTTGGGTTCCACATACCGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGG CTTGTCTCAGCCTCTAGTGATGGCAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACC CCAAGAAAGTCATCAAAACAACCATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAA CCTCCACAGAGAATGCTTCATGGCTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCA GACAGGATTGTCTGTGGAGGCGAGGATGGCGCTGTCAAAGTCTGGAACTTCTCAGAAGCA CTGGAGATTGAGAAGAGGGCACAAGCTCTAAGAAGTATGAGGCAGGAGAACCGCATGAGG CGAAAAAAGGCACAAGTAGAGATGAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCA ATAGCCATGAAAAGAAACCAACTGAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGT GCCATCAATGATAAGGTCAAGTCTTAG

Peptide Sequence

PEP ID	Os04t0619700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31485367:31488482:-1 gene:Os04g0619700 transcript:Os04t0619700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 233 description:Similar to H0114G12.8 protein. (Os04t0619700-01)
Sequence	VGFHNFMDFDCKTARGDSSSVNRSCIVTEGTVVQAKPVSHNGKAKHWNSLSTLNNQKCSY ELLSDPKKNVETSDGETASKCDSWCFTDLPSALVCEVLEHLDPKELGIVSCVSTLLHTLA TDHQGWKKFYCERWGIPTPPVTLNGPLVPGGTSDWKSWKTLFVEREFRSKSFMGRFSVDV LRDHSEDVRTVFLLASVNLIFTGGNDSVIRMWDLEEGLLIDKSRPLCCTIRAIAADTRLL VTAGTNAFIHCWRAVEGNSYPFHISGNGTDQSPEFRLWGHEGPVTCLALDSLRIFSGSWD MTVRVWDRSEMKCVQKFMHADWVWSVAPHGNTVASTAGRDAYVWDIRSGELENVISNAHY GNAFSLARTHLADVLFTGGEDGAIRLFNVSEVSDDEDIKPAATWVPHTGPVHSLAFEYPW LVSASSDGRVALIDLRKLLTPRKSSKQPFRVKNFDPSSIEPPQRMLHGFGCDLFSVAIGA DRIVCGGEDGAVKVWNFSEALEIEKRAQALRSMRQENRMRRKKAQVEMNANGRRSDQCGS IAMKRNQLKGDKSVTWHSKRAINDKVKS

Transcript Sequence

Transcript ID	Os04t0619700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31485367:31488482:-1 gene:Os04g0619700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 233 description:Similar to H0114G12.8 protein. (Os04t0619700-01)
Sequence	GCGTGGGTTCCCAAATCGCGAAATTTTCTTTTCCCCCAAAAAACCGAATAAAGAGAAATC TCTCCGAGCGAATTCGACGAGATCGGAGGCTCGGATCGAGGTATTCTCCTTCTGATTTGA TTGGATTCGGGATCTGCTGGCGGGGATCCATCTTTAGGTAGGATTTCATAATTTTATGGA CTTTGATTGCAAAACAGCAAGAGGAGACTCTTCATCTGTGAATCGTTCATGCATTGTCAC TGAAGGCACTGTCGTCCAGGCAAAGCCCGTTTCTCACAACGGGAAAGCTAAACACTGGAA TAGCCTCAGTACATTGAATAACCAGAAGTGCAGTTATGAATTACTTTCCGACCCAAAGAA AAATGTTGAAACAAGTGATGGTGAGACCGCCTCAAAGTGTGACTCATGGTGCTTCACTGA TTTGCCATCCGCATTGGTCTGTGAAGTGCTTGAACACCTCGATCCAAAGGAACTTGGCAT TGTATCTTGCGTCTCCACCCTACTGCATACCCTAGCCACAGATCATCAGGGGTGGAAGAA GTTCTACTGTGAAAGGTGGGGGATTCCTACTCCTCCAGTCACCCTCAATGGGCCCTTGGT TCCAGGAGGAACTTCAGATTGGAAGTCTTGGAAAACATTATTTGTGGAGCGGGAGTTTCG AAGTAAATCATTCATGGGAAGATTCAGTGTGGATGTTCTCCGTGACCACAGTGAGGATGT ACGCACTGTGTTCCTTCTAGCATCAGTAAATCTGATATTTACTGGTGGTAATGACTCTGT GATCCGAATGTGGGACTTGGAGGAAGGGCTTTTGATTGATAAGTCCCGCCCACTTTGTTG CACCATCCGGGCCATTGCAGCTGACACTAGGCTTTTGGTCACTGCAGGAACCAATGCCTT TATTCATTGTTGGAGGGCTGTTGAAGGTAATTCTTACCCTTTCCACATCTCTGGGAATGG CACTGACCAGAGTCCTGAGTTTCGCCTTTGGGGGCATGAAGGACCTGTGACTTGTCTTGC CTTGGATTCATTGAGGATTTTCAGTGGTAGCTGGGATATGACTGTCCGTGTTTGGGACAG ATCCGAAATGAAATGTGTTCAGAAGTTCATGCATGCAGATTGGGTTTGGAGCGTGGCACC TCATGGAAATACTGTTGCCAGTACAGCTGGTAGGGATGCCTATGTATGGGATATCAGGAG TGGTGAGTTGGAAAATGTTATTTCCAATGCCCATTATGGTAATGCATTTTCTTTAGCTCG AACACACCTAGCTGATGTGCTGTTTACCGGAGGAGAGGATGGGGCAATTCGCCTGTTCAA TGTTTCTGAGGTCTCTGATGATGAAGATATTAAGCCAGCTGCTACTTGGGTTCCACATAC CGGCCCTGTTCATTCCCTCGCTTTTGAGTATCCATGGCTTGTCTCAGCCTCTAGTGATGG CAGGGTTGCACTGATTGATTTGAGGAAGCTTCTGACCCCAAGAAAGTCATCAAAACAACC ATTCAGGGTTAAGAACTTTGATCCAAGTTCCATTGAACCTCCACAGAGAATGCTTCATGG CTTTGGGTGCGATCTTTTTTCTGTCGCCATTGGTGCAGACAGGATTGTCTGTGGAGGCGA GGATGGCGCTGTCAAAGTCTGGAACTTCTCAGAAGCACTGGAGATTGAGAAGAGGGCACA AGCTCTAAGAAGTATGAGGCAGGAGAACCGCATGAGGCGAAAAAAGGCACAAGTAGAGAT GAATGCAAATGGTAGAAGGTCTGACCAATGTGGCTCAATAGCCATGAAAAGAAACCAACT GAAGGGTGATAAGAGTGTCACTTGGCACAGCAAGCGTGCCATCAATGATAAGGTCAAGTC TTAGATTAGGATTTGTACCCTTCACAACTTTACACTCTACAGTAGCCATGAGTTGATAGT TCTTTTCTTGGAAGTACCTTTGCTGATCCCAATTAGGCTTGCTGTGTAGGTTAACATTGG CATTTTCACTATTGAATTTTATAAGGTTACCAATGCAGTGTAGCCATGCATGAAATCCGC ATATGCAATTCTTATTCGATATGGCATATATTGATCTAACAGAAGCTCTCATTGTCTTAC TGTTTTGAGCTCTAGTTGCATTTGGGTTTTGTTCGTATCTTTCTGCTGGTAGCTGTTATG AATGGGAATCTACATTGAACTATTCCAGGAATAATAAGCTTCTGTAATTATGTCACTGCT GGATTCTTAGAACATTACTTTTGCTGTTACGTGGTCTGCAATAAGAAAATCCTGCATTCC GACTC