Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0618950-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:31434880:31435978:-1 gene:Os04g0618950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0114G12.1 protein. (Os04t0618950-00)
Sequence

ATGGCCGCCGCCGCAGTGAAGTCGCCGGAGCCGCCGTTCGCGTTCCGCCCCGCCCGTCCC
CCGCTCCCGCCGCTGCTGGACGACGAGGAGGATGGCGAGTTCGAGTTCAGCGTCCCCGCG
GCCGCCGCCGTGCTGTCCGCCGCCGACGAGCTGTTCTCCGGCGGGAGGCTCGTGCCGATG
CTCCCCCCGCCACCGCGGCGTCCCCCTTCTTCTTCTTCCCCGCCGTGCTCGCCCCCGCCG
TGCCTGGAGGTTCCCCCCTCCGAGCCGGCGTCCCCTCGCGCCCCGCGGTGTGGTGGGCAT
CGGTGGCGCGATCTGCTCACGCTCGTGTCGAAGAGGACGAGCGACGGCGAGGCGAAGGAT
CGGGTGGTGGGTGGGAGTCCGAGGCGGCGGGAGGCGCACGCCCAGCCGCTCCTCTCGCGG
GCCTCGTCGTCTTCCTCGTCGGCCTCGTCGTGCGACTCCGGGATCAGGAACGCGCGGCGG
CCCGCGACAGCGCTCCGGCGGGTGGCGAGCCTCCTCCACCTCATGTCCAAGAAGCCCGCC
GCCGTGGACGCGCCGCCGAAGCGGCGAGACCATCATCACCAGCGGTTCCTGGCCCGCGCC
TCCTCGTCGTCGTCGTCCTCGGCCTCCTCCTCCTCCGACTCCGGGAGGAACTCCCGCACG
CCGTGGCACCCGCCCGGCCCCGCGCGGCCGCGGCCGGCGGTGGCCGCCGAGAGCCCGCGG
GTGAGCGCGTCCGGGCGCGTGGTGTTCCGCGGCCTGGAGCGGTGCTCGAGCTCGCCGGCG
ACGGCGGGCATCGGCCCGCGGCGGCCGCGGCCGAGAGGCATGGAGCGGTCGTTCTCGGCC
AATGTGCGCGTGGATCCGGTGATCAACGTGTTCGGATTCGGGCATCTGTTCCTGCCATCT
TCGCCGGCCAAGGAGAAGAAGGCCGACAAGGACAGGGACATCGCCGGCGGCGGCGGCGGC
GGCGGCCGGAGGAACAGGCCGGCGAAGCTGGCCATGGTGCTGAGAGATCCGCAAGATTAG

Peptide Sequence

PEP ID

Os04t0618950-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:31434880:31435978:-1 gene:Os04g0618950 transcript:Os04t0618950-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0114G12.1 protein. (Os04t0618950-00)
Sequence

MAAAAVKSPEPPFAFRPARPPLPPLLDDEEDGEFEFSVPAAAAVLSAADELFSGGRLVPM
LPPPPRRPPSSSSPPCSPPPCLEVPPSEPASPRAPRCGGHRWRDLLTLVSKRTSDGEAKD
RVVGGSPRRREAHAQPLLSRASSSSSSASSCDSGIRNARRPATALRRVASLLHLMSKKPA
AVDAPPKRRDHHHQRFLARASSSSSSSASSSSDSGRNSRTPWHPPGPARPRPAVAAESPR
VSASGRVVFRGLERCSSSPATAGIGPRRPRPRGMERSFSANVRVDPVINVFGFGHLFLPS
SPAKEKKADKDRDIAGGGGGGGRRNRPAKLAMVLRDPQD

Transcript Sequence

Transcript ID

Os04t0618950-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31434880:31435978:-1 gene:Os04g0618950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0114G12.1 protein. (Os04t0618950-00)
Sequence

TTGATGCGCCATCGCCGCCGGCAATGGCCGCCGCCGCAGTGAAGTCGCCGGAGCCGCCGT
TCGCGTTCCGCCCCGCCCGTCCCCCGCTCCCGCCGCTGCTGGACGACGAGGAGGATGGCG
AGTTCGAGTTCAGCGTCCCCGCGGCCGCCGCCGTGCTGTCCGCCGCCGACGAGCTGTTCT
CCGGCGGGAGGCTCGTGCCGATGCTCCCCCCGCCACCGCGGCGTCCCCCTTCTTCTTCTT
CCCCGCCGTGCTCGCCCCCGCCGTGCCTGGAGGTTCCCCCCTCCGAGCCGGCGTCCCCTC
GCGCCCCGCGGTGTGGTGGGCATCGGTGGCGCGATCTGCTCACGCTCGTGTCGAAGAGGA
CGAGCGACGGCGAGGCGAAGGATCGGGTGGTGGGTGGGAGTCCGAGGCGGCGGGAGGCGC
ACGCCCAGCCGCTCCTCTCGCGGGCCTCGTCGTCTTCCTCGTCGGCCTCGTCGTGCGACT
CCGGGATCAGGAACGCGCGGCGGCCCGCGACAGCGCTCCGGCGGGTGGCGAGCCTCCTCC
ACCTCATGTCCAAGAAGCCCGCCGCCGTGGACGCGCCGCCGAAGCGGCGAGACCATCATC
ACCAGCGGTTCCTGGCCCGCGCCTCCTCGTCGTCGTCGTCCTCGGCCTCCTCCTCCTCCG
ACTCCGGGAGGAACTCCCGCACGCCGTGGCACCCGCCCGGCCCCGCGCGGCCGCGGCCGG
CGGTGGCCGCCGAGAGCCCGCGGGTGAGCGCGTCCGGGCGCGTGGTGTTCCGCGGCCTGG
AGCGGTGCTCGAGCTCGCCGGCGACGGCGGGCATCGGCCCGCGGCGGCCGCGGCCGAGAG
GCATGGAGCGGTCGTTCTCGGCCAATGTGCGCGTGGATCCGGTGATCAACGTGTTCGGAT
TCGGGCATCTGTTCCTGCCATCTTCGCCGGCCAAGGAGAAGAAGGCCGACAAGGACAGGG
ACATCGCCGGCGGCGGCGGCGGCGGCGGCCGGAGGAACAGGCCGGCGAAGCTGGCCATGG
TGCTGAGAGATCCGCAAGATTAGGTGGTGGCCATGCTGGAAATAATGCATGATATTCTTC
CAGTCTTTGGATTTTTTTT