Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0618700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31420801:31425092:-1 gene:Os04g0618700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flagellin sensitive2 description:Protein kinase, core domain containing protein. (Os04t0618700-01)
Sequence	ATGGAGAGGAATAAATTTGCAAGCAAAATGTCGCAGCATTACACGAAGACGATTTGCATT GCCGTCGTCTTGGTGGCCGTGCTGTTCTCGTTGTCGTCGGCGGCGGCGGCCGGCTCCGGT GCGGCGGTGTCCGTGCAGCTCGAGGCGCTGCTGGAGTTCAAGAACGGCGTCGCCGACGAC CCGCTCGGCGTGCTGGCCGGCTGGAGGGTGGGGAAGTCCGGTGATGGCGCCGTCCGCGGC GGCGCGCTGCCGCGGCATTGCAACTGGACGGGCGTCGCCTGCGACGGCGCCGGCCAGGTG ACGTCCATCCAGCTGCCGGAGTCGAAGCTCCGGGGCGCGCTCTCCCCGTTCCTCGGCAAC ATCTCGACGCTCCAGGTCATCGACCTGACGTCGAACGCCTTCGCCGGCGGCATCCCGCCG CAGCTCGGCCGCCTCGGCGAGCTCGAGCAGCTAGTCGTTTCTTCGAACTACTTCGCCGGC GGCATCCCGAGCAGCCTCTGCAACTGCTCGGCGATGTGGGCTCTCGCCCTGAACGTCAAC AACCTCACCGGCGCAATCCCTTCTTGCATCGGGGATCTGTCCAATCTCGAGATCTTCGAA GCCTACCTGAACAATCTTGACGGGGAGTTGCCGCCGTCCATGGCGAAGCTCAAAGGCATC ATGGTCGTTGACCTCAGCTGCAACCAGCTGTCTGGCTCGATCCCGCCGGAGATCGGCGAC CTGTCGAACCTGCAGATTCTTCAGCTGTACGAGAACCGGTTCTCCGGCCACATCCCGCGG GAGCTCGGCCGGTGCAAGAACCTCACCTTGCTCAACATATTCAGCAACGGGTTCACCGGC GAGATCCCCGGCGAGCTCGGCGAGCTCACGAACCTGGAGGTCATGCGCCTGTACAAGAAC GCGCTCACGTCGGAGATCCCCCGGTCGCTCCGGCGTTGCGTGTCGCTGCTGAATCTCGAC CTGTCGATGAACCAGCTCGCCGGGCCCATCCCGCCGGAGCTCGGCGAGCTCCCGTCGCTC CAGAGATTGTCGCTCCATGCCAACCGGCTCGCCGGGACGGTTCCGGCGTCGCTGACGAAT CTCGTCAACCTGACCATCCTGGAGCTGAGCGAGAACCACCTGTCCGGGCCGCTTCCGGCG AGCATCGGGTCACTGCGGAATCTCCGGCGGCTCATCGTCCAGAACAACTCGCTCTCCGGC CAAATTCCGGCGAGCATCAGCAACTGCACGCAGCTGGCCAACGCGAGCATGAGCTTCAAC TTGTTCTCCGGGCCATTGCCGGCGGGGCTCGGCCGGCTACAGAGCCTCATGTTCTTGTCG CTCGGCCAAAACTCGTTGGCCGGCGACATACCCGATGACCTGTTCGACTGCGGCCAACTC CAGAAGCTCGACCTGTCAGAGAACAGCTTCACCGGCGGCCTGAGCCGCCTTGTCGGCCAG CTCGGTAACCTCACAGTGCTGCAGCTGCAGGGGAACGCTCTGTCAGGTGAGATACCGGAG GAGATCGGCAACATGACGAAGCTCATCAGCCTGAAACTCGGCAGGAACCGGTTCGCCGGA CATGTCCCGGCGAGCATCTCGAACATGTCCTCCCTCCAGTTGCTCGATCTGGGGCACAAT CGCCTCGACGGCGTGTTCCCGGCTGAGGTGTTCGAGCTGCGGCAGCTCACCATCCTCGGC GCCGGGTCGAACAGGTTCGCCGGCCCCATCCCCGACGCCGTCGCCAACCTCCGGTCGCTC TCGTTCCTGGACCTGTCGAGCAACATGCTCAACGGCACGGTGCCCGCGGCGCTGGGCAGG CTCGACCAGCTCCTCACGCTGGACCTCTCGCACAACCGCCTCGCCGGCGCCATCCCCGGC GCGGTGATCGCGAGCATGAGCAACGTGCAGATGTACCTCAACCTGTCGAACAACGCGTTC ACGGGCGCGATCCCGGCGGAGATCGGCGGCCTCGTGATGGTCCAGACCATCGACCTGTCG AACAACCAGCTGTCCGGCGGCGTCCCGGCGACGCTCGCCGGGTGCAAGAACCTCTACTCG CTCGACCTCTCCGGCAACAGCCTCACCGGCGAACTCCCGGCCAACCTCTTCCCCCAGCTC GACCTTCTGACGACCCTGAACATCTCCGGCAACGACCTCGACGGAGAGATCCCCGCCGAC ATCGCCGCGCTGAAGCACATACAGACGCTCGACGTGTCGAGGAACGCGTTCGCCGGGGCC ATACCGCCGGCGCTGGCGAACCTGACGGCGCTCCGGTCTCTCAACCTTTCGTCGAACACC TTCGAGGGCCCCGTCCCCGACGGCGGCGTGTTCCGGAACCTGACCATGTCGAGCCTGCAG GGGAACGCCGGCCTCTGCGGCGGGAAGCTCCTCGCGCCATGCCACGGCCACGCCGCCGGG AAGAAGCGGGTGTTCTCGCGGACGGGGCTCGTGATCCTCGTCGTGCTCATCGCGCTGTCG ACGCTGCTCCTCCTCATGGTCGCGACGATCCTGCTCGTCAGCTACCGCCGGTACAGGAGG AAGAGACGTGCCGCCGACATCGCCGGCGACTCGCCGGAGGCCGCCGTCGTGGTGCCGGAG CTGAGGAGGTTCAGTTACGGCCAGCTGGCGGCCGCCACCAACTCGTTCGACCAAGGCAAC GTCATCGGGAGCAGCAACCTGAGCACGGTGTACAAGGGCGTGCTCGCCGGCGACGCCGAC GGCGGCATGGTCGTCGCCGTGAAGCGGCTGAACCTGGAGCAGTTCCCGTCCAAGTCCGAC AAGTGCTTCCTCACCGAGCTCGCCACGCTGAGCCGGCTGCGGCACAAGAACCTGGCGCGT GTGGTCGGGTACGCGTGGGAGGCCGGCAAGATCAAGGCCCTGGTCCTCGACTACATGGTC AACGGCGACCTGGACGGCGCGATACACGGCGGCGCCGCCGCGCCGCCGCCGGCGCCGTCG CGGTGGACGGTCAGGGAGCGGCTGCGGGTGTGCGTGTCGGTGGCGCACGGGCTGGTGTAC CTCCACTCCGGGTACGACTTCCCCGTCGTGCACTGCGACGTCAAGCCGTCCAACGTCCTG CTCGACGGCGACTGGGAGGCGCGCGTCAGCGACTTCGGCACCGCGCGCATGCTGGGCGTC CACCTGCCCGCCGCCGCCAACGCCGCGGCGCAGTCGACGGCCACCTCGTCGGCGTTCCGG GGCACCGTGGGTTACATGGCTCCAGAGTTCGCGTACATGAGGACGGTGTCGACGAAGGTG GACGTGTTCAGCTTCGGGGTGCTGGCGATGGAGCTCTTCACCGGGCGGCGGCCGACGGGG ACGATCGAGGAGGACGGCGTGCCGCTGACGCTGCAGCAGCTCGTCGACAACGCGGTCTCG AGGGGGCTCGACGGCGTCCACGCCGTCCTGGACCCCCGCATGAAGGTCGCCACCGAGGCC GACCTGTCCACGGCGGCGGACGTGCTCGCCGTTGCCCTGTCCTGCGCCGCGTTCGAGCCG GCCGACCGGCCCGACATGGGCGCCGTGCTCTCGTCCTTGCTCAAGATGAGCAAGCTCGTC GGAGAAGACTGA

Peptide Sequence

PEP ID	Os04t0618700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31420801:31425092:-1 gene:Os04g0618700 transcript:Os04t0618700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flagellin sensitive2 description:Protein kinase, core domain containing protein. (Os04t0618700-01)
Sequence	MERNKFASKMSQHYTKTICIAVVLVAVLFSLSSAAAAGSGAAVSVQLEALLEFKNGVADD PLGVLAGWRVGKSGDGAVRGGALPRHCNWTGVACDGAGQVTSIQLPESKLRGALSPFLGN ISTLQVIDLTSNAFAGGIPPQLGRLGELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVN NLTGAIPSCIGDLSNLEIFEAYLNNLDGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGD LSNLQILQLYENRFSGHIPRELGRCKNLTLLNIFSNGFTGEIPGELGELTNLEVMRLYKN ALTSEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTN LVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFN LFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSRLVGQ LGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGHN RLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAALGR LDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYLNLSNNAFTGAIPAEIGGLVMVQTIDLS NNQLSGGVPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPAD IAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFEGPVPDGGVFRNLTMSSLQ GNAGLCGGKLLAPCHGHAAGKKRVFSRTGLVILVVLIALSTLLLLMVATILLVSYRRYRR KRRAADIAGDSPEAAVVVPELRRFSYGQLAAATNSFDQGNVIGSSNLSTVYKGVLAGDAD GGMVVAVKRLNLEQFPSKSDKCFLTELATLSRLRHKNLARVVGYAWEAGKIKALVLDYMV NGDLDGAIHGGAAAPPPAPSRWTVRERLRVCVSVAHGLVYLHSGYDFPVVHCDVKPSNVL LDGDWEARVSDFGTARMLGVHLPAAANAAAQSTATSSAFRGTVGYMAPEFAYMRTVSTKV DVFSFGVLAMELFTGRRPTGTIEEDGVPLTLQQLVDNAVSRGLDGVHAVLDPRMKVATEA DLSTAADVLAVALSCAAFEPADRPDMGAVLSSLLKMSKLVGED

Transcript Sequence

Transcript ID	Os04t0618700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31420801:31425092:-1 gene:Os04g0618700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flagellin sensitive2 description:Protein kinase, core domain containing protein. (Os04t0618700-01)
Sequence	ATGGTTGCATGGAGAGGAATAAATTTGCAAGCAAAATGTCGCAGCATTACACGAAGACGA TTTGCATTGCCGTCGTCTTGGTGGCCGTGCTGTTCTCGTTGTCGTCGGCGGCGGCGGCCG GCTCCGGTGCGGCGGTGTCCGTGCAGCTCGAGGCGCTGCTGGAGTTCAAGAACGGCGTCG CCGACGACCCGCTCGGCGTGCTGGCCGGCTGGAGGGTGGGGAAGTCCGGTGATGGCGCCG TCCGCGGCGGCGCGCTGCCGCGGCATTGCAACTGGACGGGCGTCGCCTGCGACGGCGCCG GCCAGGTGACGTCCATCCAGCTGCCGGAGTCGAAGCTCCGGGGCGCGCTCTCCCCGTTCC TCGGCAACATCTCGACGCTCCAGGTCATCGACCTGACGTCGAACGCCTTCGCCGGCGGCA TCCCGCCGCAGCTCGGCCGCCTCGGCGAGCTCGAGCAGCTAGTCGTTTCTTCGAACTACT TCGCCGGCGGCATCCCGAGCAGCCTCTGCAACTGCTCGGCGATGTGGGCTCTCGCCCTGA ACGTCAACAACCTCACCGGCGCAATCCCTTCTTGCATCGGGGATCTGTCCAATCTCGAGA TCTTCGAAGCCTACCTGAACAATCTTGACGGGGAGTTGCCGCCGTCCATGGCGAAGCTCA AAGGCATCATGGTCGTTGACCTCAGCTGCAACCAGCTGTCTGGCTCGATCCCGCCGGAGA TCGGCGACCTGTCGAACCTGCAGATTCTTCAGCTGTACGAGAACCGGTTCTCCGGCCACA TCCCGCGGGAGCTCGGCCGGTGCAAGAACCTCACCTTGCTCAACATATTCAGCAACGGGT TCACCGGCGAGATCCCCGGCGAGCTCGGCGAGCTCACGAACCTGGAGGTCATGCGCCTGT ACAAGAACGCGCTCACGTCGGAGATCCCCCGGTCGCTCCGGCGTTGCGTGTCGCTGCTGA ATCTCGACCTGTCGATGAACCAGCTCGCCGGGCCCATCCCGCCGGAGCTCGGCGAGCTCC CGTCGCTCCAGAGATTGTCGCTCCATGCCAACCGGCTCGCCGGGACGGTTCCGGCGTCGC TGACGAATCTCGTCAACCTGACCATCCTGGAGCTGAGCGAGAACCACCTGTCCGGGCCGC TTCCGGCGAGCATCGGGTCACTGCGGAATCTCCGGCGGCTCATCGTCCAGAACAACTCGC TCTCCGGCCAAATTCCGGCGAGCATCAGCAACTGCACGCAGCTGGCCAACGCGAGCATGA GCTTCAACTTGTTCTCCGGGCCATTGCCGGCGGGGCTCGGCCGGCTACAGAGCCTCATGT TCTTGTCGCTCGGCCAAAACTCGTTGGCCGGCGACATACCCGATGACCTGTTCGACTGCG GCCAACTCCAGAAGCTCGACCTGTCAGAGAACAGCTTCACCGGCGGCCTGAGCCGCCTTG TCGGCCAGCTCGGTAACCTCACAGTGCTGCAGCTGCAGGGGAACGCTCTGTCAGGTGAGA TACCGGAGGAGATCGGCAACATGACGAAGCTCATCAGCCTGAAACTCGGCAGGAACCGGT TCGCCGGACATGTCCCGGCGAGCATCTCGAACATGTCCTCCCTCCAGTTGCTCGATCTGG GGCACAATCGCCTCGACGGCGTGTTCCCGGCTGAGGTGTTCGAGCTGCGGCAGCTCACCA TCCTCGGCGCCGGGTCGAACAGGTTCGCCGGCCCCATCCCCGACGCCGTCGCCAACCTCC GGTCGCTCTCGTTCCTGGACCTGTCGAGCAACATGCTCAACGGCACGGTGCCCGCGGCGC TGGGCAGGCTCGACCAGCTCCTCACGCTGGACCTCTCGCACAACCGCCTCGCCGGCGCCA TCCCCGGCGCGGTGATCGCGAGCATGAGCAACGTGCAGATGTACCTCAACCTGTCGAACA ACGCGTTCACGGGCGCGATCCCGGCGGAGATCGGCGGCCTCGTGATGGTCCAGACCATCG ACCTGTCGAACAACCAGCTGTCCGGCGGCGTCCCGGCGACGCTCGCCGGGTGCAAGAACC TCTACTCGCTCGACCTCTCCGGCAACAGCCTCACCGGCGAACTCCCGGCCAACCTCTTCC CCCAGCTCGACCTTCTGACGACCCTGAACATCTCCGGCAACGACCTCGACGGAGAGATCC CCGCCGACATCGCCGCGCTGAAGCACATACAGACGCTCGACGTGTCGAGGAACGCGTTCG CCGGGGCCATACCGCCGGCGCTGGCGAACCTGACGGCGCTCCGGTCTCTCAACCTTTCGT CGAACACCTTCGAGGGCCCCGTCCCCGACGGCGGCGTGTTCCGGAACCTGACCATGTCGA GCCTGCAGGGGAACGCCGGCCTCTGCGGCGGGAAGCTCCTCGCGCCATGCCACGGCCACG CCGCCGGGAAGAAGCGGGTGTTCTCGCGGACGGGGCTCGTGATCCTCGTCGTGCTCATCG CGCTGTCGACGCTGCTCCTCCTCATGGTCGCGACGATCCTGCTCGTCAGCTACCGCCGGT ACAGGAGGAAGAGACGTGCCGCCGACATCGCCGGCGACTCGCCGGAGGCCGCCGTCGTGG TGCCGGAGCTGAGGAGGTTCAGTTACGGCCAGCTGGCGGCCGCCACCAACTCGTTCGACC AAGGCAACGTCATCGGGAGCAGCAACCTGAGCACGGTGTACAAGGGCGTGCTCGCCGGCG ACGCCGACGGCGGCATGGTCGTCGCCGTGAAGCGGCTGAACCTGGAGCAGTTCCCGTCCA AGTCCGACAAGTGCTTCCTCACCGAGCTCGCCACGCTGAGCCGGCTGCGGCACAAGAACC TGGCGCGTGTGGTCGGGTACGCGTGGGAGGCCGGCAAGATCAAGGCCCTGGTCCTCGACT ACATGGTCAACGGCGACCTGGACGGCGCGATACACGGCGGCGCCGCCGCGCCGCCGCCGG CGCCGTCGCGGTGGACGGTCAGGGAGCGGCTGCGGGTGTGCGTGTCGGTGGCGCACGGGC TGGTGTACCTCCACTCCGGGTACGACTTCCCCGTCGTGCACTGCGACGTCAAGCCGTCCA ACGTCCTGCTCGACGGCGACTGGGAGGCGCGCGTCAGCGACTTCGGCACCGCGCGCATGC TGGGCGTCCACCTGCCCGCCGCCGCCAACGCCGCGGCGCAGTCGACGGCCACCTCGTCGG CGTTCCGGGGCACCGTGGGTTACATGGCTCCAGAGTTCGCGTACATGAGGACGGTGTCGA CGAAGGTGGACGTGTTCAGCTTCGGGGTGCTGGCGATGGAGCTCTTCACCGGGCGGCGGC CGACGGGGACGATCGAGGAGGACGGCGTGCCGCTGACGCTGCAGCAGCTCGTCGACAACG CGGTCTCGAGGGGGCTCGACGGCGTCCACGCCGTCCTGGACCCCCGCATGAAGGTCGCCA CCGAGGCCGACCTGTCCACGGCGGCGGACGTGCTCGCCGTTGCCCTGTCCTGCGCCGCGT TCGAGCCGGCCGACCGGCCCGACATGGGCGCCGTGCTCTCGTCCTTGCTCAAGATGAGCA AGCTCGTCGGAGAAGACTGAACAAAAAAAAAAAAGAAGAGAAAAGCTAAACTCTCGCTGC AATTCTGCAGAATGCAGCAGCGAAAACGTGCAAATTTCTTGGAAGATTCAGAGTTCAGTT CATGATGATCTCAAATGGTTTTTCGAGTTGTTTGCATTGCGAACTTTCTCCATTGATGAG GTGTACTGTTGCTACTGTGCATGGTCAAGGAGCCGTTCGTGTGAGCTTACTGAGGGTGTG TTAGTTCTTCGGGAGTAAAGCTTTTGAATTATACAGACACATATTTGAAGTATTAAATGT ATACTAATAACAAAACAAATTACAGATTCTGCCTGTAAACTGTGAGACAAATTTATTAAG ACTAATTAGTTCATCATTAGCAAATATTTATTGTAGCATCATATTGTTAAATCATGGCGT AATTTGGCTC