Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0618600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31416378:31420095:1 gene:Os04g0618600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 101 description:Similar to Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Basic helix-loop-helix protein 26) (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red light). (Os04t0618600-01)
Sequence	ATGGAAGCAAGAAGGCCTACCCCTACCAGGAGAAGCAGATCTGCTGAGTTCCACAATTTT TCAGAAAGGAGGAGAAGGGATAGGATCAATGAGAAGCTGAAGGCGCTGCAAGAGCTACTT CCAAATTGCACCAAGACCGACAAAGTTTCGATGCTGGATGAAGCGATCGACTACCTGAAA TCACTCCAACTACAACTCCAGATGCTGGTCATGGGGAAGGGAATGGCACCGGTTGTTCCT CCTGAGCTGCAACAATACATGCACTATATCACAGCTGATCCTTCTCAAATTCCTCCCATA CGCCCCTCCGAGCCGCGGCCATTTCAGATAACCCACGCCACCCAACAGAGACAGTCTAAC GTCGAGTCGGATTTCTTGAGCCAGATGCAGAATTTGCACCCTTCAGAGCCACCTCAAAAT TTCCTCAGACCACCAAAATTGCAGTTGTACACGCCGGAGCAGCAGAGAAGAGGTCTAGCT AGTAGCAGTGGCCACAACAGCGGTTGGATCACGGAGAGGAATTCATCGTACAACTTCTTG GAGTGA

Peptide Sequence

PEP ID	Os04t0618600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31416378:31420095:1 gene:Os04g0618600 transcript:Os04t0618600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 101 description:Similar to Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Basic helix-loop-helix protein 26) (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red light). (Os04t0618600-01)
Sequence	MEARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK SLQLQLQMLVMGKGMAPVVPPELQQYMHYITADPSQIPPIRPSEPRPFQITHATQQRQSN VESDFLSQMQNLHPSEPPQNFLRPPKLQLYTPEQQRRGLASSSGHNSGWITERNSSYNFL E

Transcript Sequence

Transcript ID	Os04t0618600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31416378:31420095:1 gene:Os04g0618600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 101 description:Similar to Long hypocotyl in far-red 1 (bHLH-like protein HFR1) (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Basic helix-loop-helix protein 26) (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red light). (Os04t0618600-01)
Sequence	AACTAACCAACGCCGCCGCCGCGGGCACCGCCCACCTGCGGCGGCGGCGGCGGCGGCGAT GGCGATGGCGACGAGTCGCGCACGCAGCGAATCGGGCGTTGTCACGCGTGCGCGCGGTGG CTGCCGGAATCTGTCTGTTGTCAGCGTGGTCACCGAACCTGAACCTGGCAGTACGCATGC TCGGCTGCTCGCTCGCACGCGCGTGCAGTCACCGGCGCAATCTACCATTGCAGAGGAGTA GGAGGAGGGCTAGGGCTAGGAGTTGGCCTCTACTAGCTGCTGCATTCGGGCTACGAAAGC AACCAAAATAATGGAGGGAATCATCAAGATCGATGTCGATCGAATTAATTAAGGAGAATT GTATGTGTGTAGGGGTTAGGGAAAGCCCTCACTACTCTGAACTCTGAAGAAACAATCTAT GCATAGTACTGTACCTTGACGAACTCTTTCTTTGCAAGTCAAGTTAGAGCCATCACCTAT AGCAAGGTAGGTGAAATGATTGACCTTATGGGCGCCTCTCCAAAAATCGTAAACAAAGTC CCATCAGAGACTCAGATACATGGTAGAGGCTGACGATCGATCCAAACAAGAAATTCCACG GCCGGTGAGTGAAAAAGATAAGGATAACTACAGTGCGCAGACCCTGCATGCCATGGTGCA AAAGCTTATAGAATTCAGATGCCATAAATACTACTATCCCTGGAGCTAAAGGTTGGTGGG TCGAGGAGACCATCTTGTCACCAAGAAAGCTCTCAGAACTCTCCATCTCTAGGCCAGCTT AGGGCTGGACCAGCTAGCAGCCATTGGTAGCCTGTATCAGTTCATAAGGGGAGGAGGTGA AGGCAAGGAGGCAGCTAGCCAAGAAGAAGAGCAGACACCAAAACTCAGGAAGGTGAATAT ATTCTTGAAAAGATCCGATGGAAGCAAGAAGGCCTACCCCTACCAGGAGAAGCAGATCTG CTGAGTTCCACAATTTTTCAGAAAGGAGGAGAAGGGATAGGATCAATGAGAAGCTGAAGG CGCTGCAAGAGCTACTTCCAAATTGCACCAAGACCGACAAAGTTTCGATGCTGGATGAAG CGATCGACTACCTGAAATCACTCCAACTACAACTCCAGATGCTGGTCATGGGGAAGGGAA TGGCACCGGTTGTTCCTCCTGAGCTGCAACAATACATGCACTATATCACAGCTGATCCTT CTCAAATTCCTCCCATACGCCCCTCCGAGCCGCGGCCATTTCAGATAACCCACGCCACCC AACAGAGACAGTCTAACGTCGAGTCGGATTTCTTGAGCCAGATGCAGAATTTGCACCCTT CAGAGCCACCTCAAAATTTCCTCAGACCACCAAAATTGCAGTTGTACACGCCGGAGCAGC AGAGAAGAGGTCTAGCTAGTAGCAGTGGCCACAACAGCGGTTGGATCACGGAGAGGAATT CATCGTACAACTTCTTGGAGTGATGACCACCTGACGAGTTACTAAGAGATCCAGAAGCAG ATGCAGTCTAGACTCTACTACTCTAGACTGCATAACCTTCATTCAGTTCATGGTGTTCCT GGAGATGAAACAAGTTGCTCAATGGAGTGATGAATCTACTGCATGCAGTTAACTAGTTAA TTTTGTACGTCAATAAATAGTGGTGATCCTGATCTTGCTTCCTCGTCATGTTCTGTGCAT ACAAGACCTAAAGCGTTTTTGTGATCTCTGTACTGTATATTAGCAGACAGTCTACTTCCT GCTGCTGATGCTTATGTGCTCTGACAAGCAAATCAACATGGCTAATTTAATCAAGT