Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0616500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31299841:31307729:-1 gene:Os04g0616500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.11 protein. (Os04t0616500-01)
Sequence	ATGGGGTGGAGGATGGCGGTGAGTCGGCTCCTCCATGGCTGTGTTCTTGTGCTGCTTCTT GCAGCGGCGGTTGTTCAGGCTCAGCGGGCGGCGACGAGGACTGATCCGACTGAAGCGGCG GCGCTGAACGCGGTGTTCGCGAAGCTAGGGCAGCAGGCGCAGTCGTCATGGAACCTCAGC GGCGACCCCTGCACCGGCCGGGCGACGGACGGCTCCGCCATCGACGACACCAGCTTCAAC CCGGCCATCACCTGCGACTGCACCTTCCAGAACAGCACCATCTGCCGCATCACCAAGCTG AAAATACATGCCGTGGATGCGTCTGGCCCGATACCGGAAGAGCTGCGGAACCTCACGCGC TTGACCGATCTGAATTTAGGACAAAATTTATTATCAGGGCCTTTGCCATCGTTCATTGGG GAGCTGACTAATATGCAGAAAATGACATTTGGCATCAATTCATTATCTGGACCTATTCCA AAGGAGCTCGGTAATCTTACGAATCTTATATCACTGGGTTTGGGCTCAAACCATTTCAAT GGTTCGCTTCCTACAGAACTAGGGAACCTGATCAAACTTCAGGAACTGTACATTGACAGT GCTGGCTTAAGTGGTCCGTTACCATCATCATTGTCCAAGCTTACAAGAATGCAAATATTG TGGGCATCAGATAACAATTTTACTGGACAAATACCAGATTATATTGGGAGCTGGAATTTG ACAGACCTGCGGTTTCAAGGCAATTCTTTTCAAGGTCCAATTCCCGCTGCTCTTTCTAAT CTTGTCCAATTATCAAGCTTACGAATCGGTGATATTGAAAATGGAAGCTCTTCTTCACTG GCATTCATCAGTAACATGACATCATTGAGCATCCTGATTTTGAGGAACTGTAGGATATCT GATAATCTTGCATCATTAGACTTTTCAAAGTTTGCGAGTTTAAGCTTACTGGATTTGAGT TTTAACAATATCACTGGTGAAGTACCAGCAACCCTGTTGGGTCTGAATTCTCTGAACTTC TTATTTCTTGGGAATAATAGTCTTTCAGGAAGCCTTCCAACCTCAAAAGGATCTTCACTT TCAACTTTAGATTTTTCTTACAACCAGCTCTCAGGAAACTTTCCTCCTTGGGCTAGTGAT AAAAATTTACAATTGAATTTGGTGGCAAACAATTTTGTGATTGATAGTTCCAATAACAGT ATCTTACCTTCAGGGCTGGCATGCCTTCAGAGAAATACATCCTTCTTTCTTGGTTCTCCA CAGTCTTCCTCCTTTGCTGTGAACTGTGGTAGCAATAGATTCATATCAGGCTCAGATAAT TTAAGGTATGAAACTGATGATGTCAATCTTCAAGCAGCATCATATAATGTTACAGGAGCA CCAACGTGGGGTGTTAGCAACGTTGGAAAGTTCATGGACGCACCAAATGGGAATTACATA ATCTACAGCTCCCGCCAGTTTCAGCACACCCTAGATTCAGAACTGTTCCAAACTTCAAGG ATGTCACCATCATCCTTAAGATACTATGGTATTGGACTTGAGAATGGAAACTATACAGTC ACTCTTCAATTTGCAGAGTTTGGAATCGAAGATACACAGTCTTGGAAGAGCCTAGGGAGA AGGGTTTTTGATATATATGTGCAGGGTGAACGCAAGGAGAAGAACTTTGACATCAGGAAG ACAGCAGGCGATAAATCTTACACTGTTGTTAAGAAGCAATACAAAGTTCCTGTGACCAAA AACTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGCACTTGCTGCATTCCTACTCAA GGATACTATGGGCCCACTATCTCAGCTCTGAGTGTAATCCCTGCAGATTTCACCCCTACA GTGGGTAATACAGCACATAAAAACAAGAGTACTAGTAAAACAGGTGTAATTGTTGGAGTT GTAGTTGGTGTGACGGTTTTAGGTTTGGTAGCACTTGTTGGAATCTTTATGTGGAGACAG AAAAGGAGAAAATTATCACTGGAGCAACAAGAGCTATACAGTATTGTCGGAAGACCTAAT GTATTCAGTTATAGTGAACTAAGGTCTGCAACTGAAAATTTTAGTTCCAGCAACCGCCTT GGTGAAGGAGGATATGGGACAGTTTATAAGGGCAAGTTAACTGATGGAAGGGTAGTGGCA GTGAAGCAGCTATCTCAAACATCTCATCAAGGGAAAAAACAATTTGCGACGGAGATAGAA ACTATATCCCGAGTGCAACATCGTAATCTCGTGAAGTTGTATGGTTGCTGCCTTGAAGGC AATAATCCACTGCTGGTTTATGAGTACATGGAAAACGGAAGCCTTGATAAAGCATTGTTT GGAACTGAGAAATTGACCATAGATTGGCCAGCACGTTTTGAGATATGCCTAGGCATTGCA AGAGGTCTGGCTTATCTTCATGAAGAGTCCAGCATCTGTGTTGTGCACAGGGACATCAAG GCCAGCAATGTCTTAATTGACGCCAATCTCAATCCTAAGATCTCTGATTTTGGGCTAGCC AAACTTTATGATGACAAGAAGACGCATGTCAGCACGAAGGTTGCTGGCACATTCGGTTAT CTTGCACCTGAGTACGCCATGAGAGGCCATATGACCGAGAAAGTTGACGTCTTTGCATTT GGCGTGGTCTTATTGGAGACTTTAGCCGGACGGCCAAACTATGATGATACGCTTGAAGAA GACAAAATTTATATTTTCGAATGGGCCTGGGAGCTGTACGAGAACAACAACCCTCTGGGC CTCGTAGACCCAAAGCTCAAGGAATTCAACCGGGAGGAGGTGCTCCGTGCCATCCGCGTC GCCCTCCTCTGCACCCAGTGGTCGCCTCACCAGCGGGCGCCAATGTCGAGGGTCGTGTCG ATGCTCGCCGGCGATGTCGAGGTGCCCGATGTGCTGACAAAGCCGAGCTACATCACCGAG TGGCAGATCAAGGGTGGCAACACCAGCTTCGCCAACAGCGGAGTCAGCGGGCAGTCGAGC TCGGCGCCGGGATCGGCCTCGGAGCAGCAAGGCTCGTCATTGTTCTTGAACTCCGTCATC CCGGAAGGCCGGTGA

Peptide Sequence

PEP ID	Os04t0616500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31299841:31307729:-1 gene:Os04g0616500 transcript:Os04t0616500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.11 protein. (Os04t0616500-01)
Sequence	MGWRMAVSRLLHGCVLVLLLAAAVVQAQRAATRTDPTEAAALNAVFAKLGQQAQSSWNLS GDPCTGRATDGSAIDDTSFNPAITCDCTFQNSTICRITKLKIHAVDASGPIPEELRNLTR LTDLNLGQNLLSGPLPSFIGELTNMQKMTFGINSLSGPIPKELGNLTNLISLGLGSNHFN GSLPTELGNLIKLQELYIDSAGLSGPLPSSLSKLTRMQILWASDNNFTGQIPDYIGSWNL TDLRFQGNSFQGPIPAALSNLVQLSSLRIGDIENGSSSSLAFISNMTSLSILILRNCRIS DNLASLDFSKFASLSLLDLSFNNITGEVPATLLGLNSLNFLFLGNNSLSGSLPTSKGSSL STLDFSYNQLSGNFPPWASDKNLQLNLVANNFVIDSSNNSILPSGLACLQRNTSFFLGSP QSSSFAVNCGSNRFISGSDNLRYETDDVNLQAASYNVTGAPTWGVSNVGKFMDAPNGNYI IYSSRQFQHTLDSELFQTSRMSPSSLRYYGIGLENGNYTVTLQFAEFGIEDTQSWKSLGR RVFDIYVQGERKEKNFDIRKTAGDKSYTVVKKQYKVPVTKNFLEIHLFWAGKGTCCIPTQ GYYGPTISALSVIPADFTPTVGNTAHKNKSTSKTGVIVGVVVGVTVLGLVALVGIFMWRQ KRRKLSLEQQELYSIVGRPNVFSYSELRSATENFSSSNRLGEGGYGTVYKGKLTDGRVVA VKQLSQTSHQGKKQFATEIETISRVQHRNLVKLYGCCLEGNNPLLVYEYMENGSLDKALF GTEKLTIDWPARFEICLGIARGLAYLHEESSICVVHRDIKASNVLIDANLNPKISDFGLA KLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTLEE DKIYIFEWAWELYENNNPLGLVDPKLKEFNREEVLRAIRVALLCTQWSPHQRAPMSRVVS MLAGDVEVPDVLTKPSYITEWQIKGGNTSFANSGVSGQSSSAPGSASEQQGSSLFLNSVI PEGR

Transcript Sequence

Transcript ID	Os04t0616500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31299841:31307729:-1 gene:Os04g0616500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.11 protein. (Os04t0616500-01)
Sequence	ACCGTCTCGCGGCTCACCGCTTCTCTTCTCCCGGAAGGGGAGGAGAGGTCTCGAGGAGGA AGATGGGGTGGAGGATGGCGGTGAGTCGGCTCCTCCATGGCTGTGTTCTTGTGCTGCTTC TTGCAGCGGCGGTTGTTCAGGCTCAGCGGGCGGCGACGAGGACTGATCCGACTGAAGCGG CGGCGCTGAACGCGGTGTTCGCGAAGCTAGGGCAGCAGGCGCAGTCGTCATGGAACCTCA GCGGCGACCCCTGCACCGGCCGGGCGACGGACGGCTCCGCCATCGACGACACCAGCTTCA ACCCGGCCATCACCTGCGACTGCACCTTCCAGAACAGCACCATCTGCCGCATCACCAAGC TGAAAATACATGCCGTGGATGCGTCTGGCCCGATACCGGAAGAGCTGCGGAACCTCACGC GCTTGACCGATCTGAATTTAGGACAAAATTTATTATCAGGGCCTTTGCCATCGTTCATTG GGGAGCTGACTAATATGCAGAAAATGACATTTGGCATCAATTCATTATCTGGACCTATTC CAAAGGAGCTCGGTAATCTTACGAATCTTATATCACTGGGTTTGGGCTCAAACCATTTCA ATGGTTCGCTTCCTACAGAACTAGGGAACCTGATCAAACTTCAGGAACTGTACATTGACA GTGCTGGCTTAAGTGGTCCGTTACCATCATCATTGTCCAAGCTTACAAGAATGCAAATAT TGTGGGCATCAGATAACAATTTTACTGGACAAATACCAGATTATATTGGGAGCTGGAATT TGACAGACCTGCGGTTTCAAGGCAATTCTTTTCAAGGTCCAATTCCCGCTGCTCTTTCTA ATCTTGTCCAATTATCAAGCTTACGAATCGGTGATATTGAAAATGGAAGCTCTTCTTCAC TGGCATTCATCAGTAACATGACATCATTGAGCATCCTGATTTTGAGGAACTGTAGGATAT CTGATAATCTTGCATCATTAGACTTTTCAAAGTTTGCGAGTTTAAGCTTACTGGATTTGA GTTTTAACAATATCACTGGTGAAGTACCAGCAACCCTGTTGGGTCTGAATTCTCTGAACT TCTTATTTCTTGGGAATAATAGTCTTTCAGGAAGCCTTCCAACCTCAAAAGGATCTTCAC TTTCAACTTTAGATTTTTCTTACAACCAGCTCTCAGGAAACTTTCCTCCTTGGGCTAGTG ATAAAAATTTACAATTGAATTTGGTGGCAAACAATTTTGTGATTGATAGTTCCAATAACA GTATCTTACCTTCAGGGCTGGCATGCCTTCAGAGAAATACATCCTTCTTTCTTGGTTCTC CACAGTCTTCCTCCTTTGCTGTGAACTGTGGTAGCAATAGATTCATATCAGGCTCAGATA ATTTAAGGTATGAAACTGATGATGTCAATCTTCAAGCAGCATCATATAATGTTACAGGAG CACCAACGTGGGGTGTTAGCAACGTTGGAAAGTTCATGGACGCACCAAATGGGAATTACA TAATCTACAGCTCCCGCCAGTTTCAGCACACCCTAGATTCAGAACTGTTCCAAACTTCAA GGATGTCACCATCATCCTTAAGATACTATGGTATTGGACTTGAGAATGGAAACTATACAG TCACTCTTCAATTTGCAGAGTTTGGAATCGAAGATACACAGTCTTGGAAGAGCCTAGGGA GAAGGGTTTTTGATATATATGTGCAGGGTGAACGCAAGGAGAAGAACTTTGACATCAGGA AGACAGCAGGCGATAAATCTTACACTGTTGTTAAGAAGCAATACAAAGTTCCTGTGACCA AAAACTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGCACTTGCTGCATTCCTACTC AAGGATACTATGGGCCCACTATCTCAGCTCTGAGTGTAATCCCTGCAGATTTCACCCCTA CAGTGGGTAATACAGCACATAAAAACAAGAGTACTAGTAAAACAGGTGTAATTGTTGGAG TTGTAGTTGGTGTGACGGTTTTAGGTTTGGTAGCACTTGTTGGAATCTTTATGTGGAGAC AGAAAAGGAGAAAATTATCACTGGAGCAACAAGAGCTATACAGTATTGTCGGAAGACCTA ATGTATTCAGTTATAGTGAACTAAGGTCTGCAACTGAAAATTTTAGTTCCAGCAACCGCC TTGGTGAAGGAGGATATGGGACAGTTTATAAGGGCAAGTTAACTGATGGAAGGGTAGTGG CAGTGAAGCAGCTATCTCAAACATCTCATCAAGGGAAAAAACAATTTGCGACGGAGATAG AAACTATATCCCGAGTGCAACATCGTAATCTCGTGAAGTTGTATGGTTGCTGCCTTGAAG GCAATAATCCACTGCTGGTTTATGAGTACATGGAAAACGGAAGCCTTGATAAAGCATTGT TTGGAACTGAGAAATTGACCATAGATTGGCCAGCACGTTTTGAGATATGCCTAGGCATTG CAAGAGGTCTGGCTTATCTTCATGAAGAGTCCAGCATCTGTGTTGTGCACAGGGACATCA AGGCCAGCAATGTCTTAATTGACGCCAATCTCAATCCTAAGATCTCTGATTTTGGGCTAG CCAAACTTTATGATGACAAGAAGACGCATGTCAGCACGAAGGTTGCTGGCACATTCGGTT ATCTTGCACCTGAGTACGCCATGAGAGGCCATATGACCGAGAAAGTTGACGTCTTTGCAT TTGGCGTGGTCTTATTGGAGACTTTAGCCGGACGGCCAAACTATGATGATACGCTTGAAG AAGACAAAATTTATATTTTCGAATGGGCCTGGGAGCTGTACGAGAACAACAACCCTCTGG GCCTCGTAGACCCAAAGCTCAAGGAATTCAACCGGGAGGAGGTGCTCCGTGCCATCCGCG TCGCCCTCCTCTGCACCCAGTGGTCGCCTCACCAGCGGGCGCCAATGTCGAGGGTCGTGT CGATGCTCGCCGGCGATGTCGAGGTGCCCGATGTGCTGACAAAGCCGAGCTACATCACCG AGTGGCAGATCAAGGGTGGCAACACCAGCTTCGCCAACAGCGGAGTCAGCGGGCAGTCGA GCTCGGCGCCGGGATCGGCCTCGGAGCAGCAAGGCTCGTCATTGTTCTTGAACTCCGTCA TCCCGGAAGGCCGGTGATTTTCGCGCGGGTCTGACTTGTCTCATGAAGTGGCAGATGATA ATCTCGTCTTGTGAATACTCGTTGCAGAGGGCAAATGGTGTGCGAGACTGTCAGTTTTGC AGTGC