Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0616300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31274513:31282357:-1 gene:Os04g0616300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.10 protein. (Os04t0616300-01)
Sequence	ATGAGGGTGATGAGCCATCTCCTCCTCCATGGCGGTGTGCTCCTGCTGCTTCTTGCAGCG GCGGCTGTTCAGGCTCAGCGGGTAGCAACCAAGACTGATCCGACTGAAGCGGCGGCGCTG AACGCGGTGTTCGCGAAGCTCGGGCAGCAGGCGTCGTTGTCGACGGCGACATGGAACATC AGCGGCGACCCCTGCACCGGCGCCGCCACGGACGGCACCCCTATCGACGACAACCCCAAC TTCAACCCGGCCATCAAGTGCGACTGCACCTTCCAGAACAACACCGTCTGCCGGATCACC AAGCTGAAAATATATGCCTTAGATGTGCCTGGCACGATACCACAAGAGCTGCGGAACCTC ACGCGCTTGACCCATCTGAATTTAGGGCAAAATACATTAACAGGGCCTTTGCCATCATTC ATTGGGGAGTTGACTAATATGCAGAACATGACATTTCGCATCAATTCATTATCTGGACCT ATTCCAAAGGAGCTCGGTAACCTTACGAATCTTGTATCACTGGGTTTAGGCTCAAACAGG TTTAATGGCTCCCTTCCTTCAGAACTGGGGAACCTGGACAAGCTTCAGGAATTGTACATT GACAGTGCTGGCTTAAGTGGTCCACTACCATCATCATTTTCCAAGCTTACAAGAATGCAA ACATTGTGGGCATCAGATAATGATTTTACTGGACAAATACCAGATTATATCGGGAACTGG AATTTGACAGACCTGCGGTTTCAAGGCAATTCTTTTCAAGGTCCAATTCCTTCTGCTCTT TCTAATCTTGTCCAACTATCAAGCTTACGAATCGGTGATATTGAAAACGGAAGCTCTTCT TCACTGGCATTCATCGGTAACATGACATCGTTGAGCATCCTGATTTTGAGGAACTGTAAG ATATCTGATAATCTTGCATCAATAGACTTTTCGAAGTTTGCAAGTTTAAACTTACTGGAT TTGAGTTTTAACAATATCACTGGTCAAGTACCAACAGCCCTGTTGGGTCTGAATTTGCTG AACTCCTTATTTCTTGGGAATAATAGTCTTTCAGGAAGCCTTCCAAGCTCAAAAGGACCT TCACTTTCAACTTTAGATTTTTCTTACAACCAGCTCTCAGGAAATTTTCCTCCATGGGCT AGTGGGAAAAATTTACAATTGAATTTGGTGGCAAACAATTTCGTGATTGATAGCTCCAAT AACAGTATCTTACCTTCAGGGCTTGCATGCCTTCAAAGAAATACGCCATGTTTTCTTGGT TCTCCACAGTCTTCCTCCTTTGCTGTGGACTGTGGTAGCAATAGACTCATATCAGCCTCA GATAATTTGAGGTATCAAACTGATGATGCCAGCCTTGGACCTGCATCATATTCTGTCACA GGAGCACCAACCTGGGGTGTTAGCAATGTTGGAAAGTTTGTGGATGCACCAAATGGAAGT TACATAATCTACAGCTCGCGCCAGTTTCAGAACACCCTAGATTCAGAACTGTTCCAGACT TCAAGGATGTCACCATCATCTTTAAGATACTATGGTATTGGACTTGAGAATGGAAACTAT ACAGTCACTCTTCAATTTGCTGAGTTTGGGATCGAAGACACGCAGACTTGGAAGAGCCTA GGGAGAAGGGTTTTTGATATATATCTCCAGGGTGAACGTCAGGAGAAGAACTTTGACATC AGGAAGGCAGCAGGCGATAAATCTTACACTGTTGTTAAGAAGTCATATAAAGTTCCTGTG ACCAAAAACTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGCACTTGCTGCATTCCT GGTCAAGGCTACTATGGGCCCACTATCTCGGCTTTGAGTGTAACCCCTGCAGATTTCACC CCCACGGTGGGTATCGTGGCAGAACAAAACAAGAGTACTAGTAAAACAGGTGTTATTGTT GGCGTTGTGGTTGGTGTGGCAGTTTTAGGTTTGGTAGCACTTGTTGGAATTTTTATGTGG AGACAGAAAAGGAGAAAACTGACACTGGAGCAACAAGAGCTATACAGTATTGTTGGAAGA CCTAATGTATTCAGTTATAGTGAACTAAGGTCTGCAACTGAAAATTTTAGTTCCAGCAAC CGTCTTGGTGAAGGAGGATATGGGGCAGTTTATAAGGGTAAGTTAAATGATGGAAGGGTA GTGGCAGTGAAGCAGCTATCTCAAACATCTCATCAAGGAAAAAAGCAATTTGCAACGGAA ATAGAAACTATATCCCGAGTGCAACACCGTAATCTTGTGAAGTTATATGGTTGCTGCCTT GAAGGCAATAATCCACTGCTGGTTTATGAGTACATGGAAAATGGAAGCCTTGATAAAGCA CTCTTTGGAATTGAGAAATTGAACATAGATTGGCCAGCACGTTTTGACATATGCTTAGGC ATTGCAAGAGGTCTGGCTTATCTTCATGAAGAGTCCAGCATCCGTGTCGTGCACAGGGAC ATCAAGGCCAGCAATGTCTTACTTGACGCCAATCTCAATCCTAAGATCTCAGATTTTGGG CTAGCCAAACTTTATGATGACAAGAAGACGCATGTCAGCACGAAAGTTGCTGGTACATTC GGTTATCTTGCACCTGAGTATGCCATGAGAGGTCATATGACTGAGAAAGTTGATGTCTTT GCATTTGGCGTGGTCTTATTGGAGACTTTAGCTGGACGGCCGAACTACGATGATACACTT GAAGAAGATAAGATTTACATTTTCGAATGGGCCTGGGAGCTGTACGAGAACAACAACCCT CTGGGCATTGTAGACCCAAATCTCAGAGAATTCAACAGGGCGGAGGTGCTCCGGGCCATC CACGTCGCCCTCCTCTGCACCCAGGGCTCACCTCACCAGCGGCCGCCCATGTCGAGGGTC GTGTCAATGCTCACCGGCGACACCGAGGTCACCGATGTGTTGATGAAGCCGAGCTACATC ACCGAGTGGCAGATCAAGGGCGGCAACACCAGCTTCGCCAACAGCGCCGTCCGCGGGCAG TCGAGCTCGGCGCCAGGATCGACGTCGCAGCAAGCCTCGTCGGTGTTCTTGAACTCCATC ATCCAGGAAGGCCGGTGA

Peptide Sequence

PEP ID	Os04t0616300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31274513:31282357:-1 gene:Os04g0616300 transcript:Os04t0616300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.10 protein. (Os04t0616300-01)
Sequence	MRVMSHLLLHGGVLLLLLAAAAVQAQRVATKTDPTEAAALNAVFAKLGQQASLSTATWNI SGDPCTGAATDGTPIDDNPNFNPAIKCDCTFQNNTVCRITKLKIYALDVPGTIPQELRNL TRLTHLNLGQNTLTGPLPSFIGELTNMQNMTFRINSLSGPIPKELGNLTNLVSLGLGSNR FNGSLPSELGNLDKLQELYIDSAGLSGPLPSSFSKLTRMQTLWASDNDFTGQIPDYIGNW NLTDLRFQGNSFQGPIPSALSNLVQLSSLRIGDIENGSSSSLAFIGNMTSLSILILRNCK ISDNLASIDFSKFASLNLLDLSFNNITGQVPTALLGLNLLNSLFLGNNSLSGSLPSSKGP SLSTLDFSYNQLSGNFPPWASGKNLQLNLVANNFVIDSSNNSILPSGLACLQRNTPCFLG SPQSSSFAVDCGSNRLISASDNLRYQTDDASLGPASYSVTGAPTWGVSNVGKFVDAPNGS YIIYSSRQFQNTLDSELFQTSRMSPSSLRYYGIGLENGNYTVTLQFAEFGIEDTQTWKSL GRRVFDIYLQGERQEKNFDIRKAAGDKSYTVVKKSYKVPVTKNFLEIHLFWAGKGTCCIP GQGYYGPTISALSVTPADFTPTVGIVAEQNKSTSKTGVIVGVVVGVAVLGLVALVGIFMW RQKRRKLTLEQQELYSIVGRPNVFSYSELRSATENFSSSNRLGEGGYGAVYKGKLNDGRV VAVKQLSQTSHQGKKQFATEIETISRVQHRNLVKLYGCCLEGNNPLLVYEYMENGSLDKA LFGIEKLNIDWPARFDICLGIARGLAYLHEESSIRVVHRDIKASNVLLDANLNPKISDFG LAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMTEKVDVFAFGVVLLETLAGRPNYDDTL EEDKIYIFEWAWELYENNNPLGIVDPNLREFNRAEVLRAIHVALLCTQGSPHQRPPMSRV VSMLTGDTEVTDVLMKPSYITEWQIKGGNTSFANSAVRGQSSSAPGSTSQQASSVFLNSI IQEGR

Transcript Sequence

Transcript ID	Os04t0616300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31274513:31282357:-1 gene:Os04g0616300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.10 protein. (Os04t0616300-01)
Sequence	GGCTCACAGCTTCTCTTCTCCCAGAAACGGAGAAGAGGGGGAGGAGGCGAGCAGAAGGCT CAAGGAGGGAGACGATGAGGGTGATGAGCCATCTCCTCCTCCATGGCGGTGTGCTCCTGC TGCTTCTTGCAGCGGCGGCTGTTCAGGCTCAGCGGGTAGCAACCAAGACTGATCCGACTG AAGCGGCGGCGCTGAACGCGGTGTTCGCGAAGCTCGGGCAGCAGGCGTCGTTGTCGACGG CGACATGGAACATCAGCGGCGACCCCTGCACCGGCGCCGCCACGGACGGCACCCCTATCG ACGACAACCCCAACTTCAACCCGGCCATCAAGTGCGACTGCACCTTCCAGAACAACACCG TCTGCCGGATCACCAAGCTGAAAATATATGCCTTAGATGTGCCTGGCACGATACCACAAG AGCTGCGGAACCTCACGCGCTTGACCCATCTGAATTTAGGGCAAAATACATTAACAGGGC CTTTGCCATCATTCATTGGGGAGTTGACTAATATGCAGAACATGACATTTCGCATCAATT CATTATCTGGACCTATTCCAAAGGAGCTCGGTAACCTTACGAATCTTGTATCACTGGGTT TAGGCTCAAACAGGTTTAATGGCTCCCTTCCTTCAGAACTGGGGAACCTGGACAAGCTTC AGGAATTGTACATTGACAGTGCTGGCTTAAGTGGTCCACTACCATCATCATTTTCCAAGC TTACAAGAATGCAAACATTGTGGGCATCAGATAATGATTTTACTGGACAAATACCAGATT ATATCGGGAACTGGAATTTGACAGACCTGCGGTTTCAAGGCAATTCTTTTCAAGGTCCAA TTCCTTCTGCTCTTTCTAATCTTGTCCAACTATCAAGCTTACGAATCGGTGATATTGAAA ACGGAAGCTCTTCTTCACTGGCATTCATCGGTAACATGACATCGTTGAGCATCCTGATTT TGAGGAACTGTAAGATATCTGATAATCTTGCATCAATAGACTTTTCGAAGTTTGCAAGTT TAAACTTACTGGATTTGAGTTTTAACAATATCACTGGTCAAGTACCAACAGCCCTGTTGG GTCTGAATTTGCTGAACTCCTTATTTCTTGGGAATAATAGTCTTTCAGGAAGCCTTCCAA GCTCAAAAGGACCTTCACTTTCAACTTTAGATTTTTCTTACAACCAGCTCTCAGGAAATT TTCCTCCATGGGCTAGTGGGAAAAATTTACAATTGAATTTGGTGGCAAACAATTTCGTGA TTGATAGCTCCAATAACAGTATCTTACCTTCAGGGCTTGCATGCCTTCAAAGAAATACGC CATGTTTTCTTGGTTCTCCACAGTCTTCCTCCTTTGCTGTGGACTGTGGTAGCAATAGAC TCATATCAGCCTCAGATAATTTGAGGTATCAAACTGATGATGCCAGCCTTGGACCTGCAT CATATTCTGTCACAGGAGCACCAACCTGGGGTGTTAGCAATGTTGGAAAGTTTGTGGATG CACCAAATGGAAGTTACATAATCTACAGCTCGCGCCAGTTTCAGAACACCCTAGATTCAG AACTGTTCCAGACTTCAAGGATGTCACCATCATCTTTAAGATACTATGGTATTGGACTTG AGAATGGAAACTATACAGTCACTCTTCAATTTGCTGAGTTTGGGATCGAAGACACGCAGA CTTGGAAGAGCCTAGGGAGAAGGGTTTTTGATATATATCTCCAGGGTGAACGTCAGGAGA AGAACTTTGACATCAGGAAGGCAGCAGGCGATAAATCTTACACTGTTGTTAAGAAGTCAT ATAAAGTTCCTGTGACCAAAAACTTCCTTGAGATTCATCTCTTCTGGGCTGGCAAGGGCA CTTGCTGCATTCCTGGTCAAGGCTACTATGGGCCCACTATCTCGGCTTTGAGTGTAACCC CTGCAGATTTCACCCCCACGGTGGGTATCGTGGCAGAACAAAACAAGAGTACTAGTAAAA CAGGTGTTATTGTTGGCGTTGTGGTTGGTGTGGCAGTTTTAGGTTTGGTAGCACTTGTTG GAATTTTTATGTGGAGACAGAAAAGGAGAAAACTGACACTGGAGCAACAAGAGCTATACA GTATTGTTGGAAGACCTAATGTATTCAGTTATAGTGAACTAAGGTCTGCAACTGAAAATT TTAGTTCCAGCAACCGTCTTGGTGAAGGAGGATATGGGGCAGTTTATAAGGGTAAGTTAA ATGATGGAAGGGTAGTGGCAGTGAAGCAGCTATCTCAAACATCTCATCAAGGAAAAAAGC AATTTGCAACGGAAATAGAAACTATATCCCGAGTGCAACACCGTAATCTTGTGAAGTTAT ATGGTTGCTGCCTTGAAGGCAATAATCCACTGCTGGTTTATGAGTACATGGAAAATGGAA GCCTTGATAAAGCACTCTTTGGAATTGAGAAATTGAACATAGATTGGCCAGCACGTTTTG ACATATGCTTAGGCATTGCAAGAGGTCTGGCTTATCTTCATGAAGAGTCCAGCATCCGTG TCGTGCACAGGGACATCAAGGCCAGCAATGTCTTACTTGACGCCAATCTCAATCCTAAGA TCTCAGATTTTGGGCTAGCCAAACTTTATGATGACAAGAAGACGCATGTCAGCACGAAAG TTGCTGGTACATTCGGTTATCTTGCACCTGAGTATGCCATGAGAGGTCATATGACTGAGA AAGTTGATGTCTTTGCATTTGGCGTGGTCTTATTGGAGACTTTAGCTGGACGGCCGAACT ACGATGATACACTTGAAGAAGATAAGATTTACATTTTCGAATGGGCCTGGGAGCTGTACG AGAACAACAACCCTCTGGGCATTGTAGACCCAAATCTCAGAGAATTCAACAGGGCGGAGG TGCTCCGGGCCATCCACGTCGCCCTCCTCTGCACCCAGGGCTCACCTCACCAGCGGCCGC CCATGTCGAGGGTCGTGTCAATGCTCACCGGCGACACCGAGGTCACCGATGTGTTGATGA AGCCGAGCTACATCACCGAGTGGCAGATCAAGGGCGGCAACACCAGCTTCGCCAACAGCG CCGTCCGCGGGCAGTCGAGCTCGGCGCCAGGATCGACGTCGCAGCAAGCCTCGTCGGTGT TCTTGAACTCCATCATCCAGGAAGGCCGGTGATTTTCACGCCGGTGCTTGATCGGATCAA CTTTTCCTCAAGTGGCAGATGATAATCTCGTCTTGTGGAGCTGTGATTGTGAATACACGT TGCGAAGGGCAAATGGTGTCAAGACTGTCAGTTTTGCAGTGCAGGTCGTCGTCTCGTTTT TCTTTTTTTTTTCTTTACAGTTTGCCGGTTGCGTTTTTAAAAATTATGTTCAGTTTGTTT CATACCTGTACAGTGTAAGTTTGAGTATATATATTTTTGATCGAATAGCTTATGTGCTTT GCCC