Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0615700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31239185:31243430:1 gene:Os04g0615700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 2 description:Argonaute and Dicer protein, PAZ domain containing protein. (Os04t0615700-01)
Sequence	ATGGAGCACGAGCGCGGTGGCGGTGGCCGCGGCCGCGGGAGGGGTCGCGGTGGCGGGCGT GGCGGCGGTGGCGGCGATGGTCGCGGAGGCGGTTATGGTGGTGCTGGTGGTGGTGGTGTC GGCGGGCGCGGTGGGCGTGGGCCTCCTGGTGGTGGTGGTGGACGCGGGTACGAGCCCGGC GGCGGGCGTGGGTACGGTGGCGGCGGCGGCGGTGGTGGACGTGGGTATGGCGGCGGAGGC GGCGGTGGTGGGTACGAGTCCGGCGGTGGGCGTGGGTATGGCGGCGGTGGACGTGGGTAT GAATCCGGCGGTGGGCGTGGACCTGGCGGCGGCGGCCGTGGGCACGAGTCCGGCGGTGGC GGTGGCCGCGGCGGGAACGTGTGGGCGCAGCCGGGGAGAGGGCGCGGAGGAGCCCCCGCC CCGGCGCCGGCGCCAGCACCAGCAGCGAGGAGGATCCAGGACGAGGGGGCCGCGAGGTCG TCGGGTACCGTTGAGCGCATTGCTTCTACTGAGGTTGTAAGAGTACAACCACCTGCACCC CCAGTTGCTGTGTCTCGTAGTGGCACGCGTGTGCCAATGCGAAGACCTGATGGTGGAGGC TCAGTATCGAAAGCCAAGGTCAAATTGTTGGTGAACCATTTTATAGTTAAGTACCGACAG GCATCAACTGTTTTTCACTATGACATAGACATCAAGCTTGATATAAGTTCCCCCAAGGCT TCAGACAAGGAGCTATCCAAGGGAGATTTTCTTACTGTCAAGGACGAGCTCTTCAAGGAT GAGAGCTTTCGGCGGCTTTCATCAGCTGTTGCTTATGATGGAAAAAGAAATTTATTTACT TGTGCTGAGCTACCAGATGGTTTGTTTCGTGTCAAAGTCCGTTCACGGACTTACATTGTA TCTGTGGAGTTCAAGAAGAAGCTTCCTTTGAGCCAACTCTCGGAACTGCCTGTGCCCAGA GAGGTCTTGCAGGGGCTTGATGTCATTGTGCGTGAGGCCTCTAGCTGGCGCAAGATTATC ATTGGTCAGGGATTTTACTCGCAGGGCCGCAGTGTGCCCATTGGGCCGGATGTTGTAGCT CTCAAAGGAACCCAGCAGACCCTGAAATGCACTCAGAAAGGACTGATCCTTTGTGTGGAC TATTCGGTTATGCCGTTTCGCAAAGCTGGACCTGTGTTGGATCTTGTTCAGAAGTCTGTG AGATACCTTGACTACAGGACAACACTAAACAAACACCAATTGGACACTTTGAAGAATGAA CTCAAAGGCCAGCGTGTCACTGTAAATCATAGGAGGACAAAGCAGAAGTACATTGTTAAA GGTTTGACTGATAAACCTGCAAGTCAGATAACTTTTGTAGATTCTGAATCAGGACAGACC AAGAAGCTTCTTGATTACTATTCGCAGCAGTATGGCAAGGTTATTGAGTATCAAATGCTT CCATGCTTGGATTTGAGCAAGAGCAAGGACAAGCAAAACTATGTGCCGATTGAATTGTGT GATCTTCTTGAAGGGCAGAGATACCCAAAAGCAAGCTTAAATAGGAATTCTGATAAAACA CTGAAAGAAATGGCTTTGATCCCTGCCTCAAGTAGGAAGGAGGAGATTCTGGAGTTGGTG AATGCTGACGATGGGCCTTGCAGGGGTGAAATTGCTCAGCAGTTCGGGATTTCTTTGGAT GTACAAATGATGGAAGTCACTGGTAGGACCCTTCCTCCTCCCAGCCTAAAACTTGGCACC TCCAGTGGCCAACCCCCCAAATTCAATATTGATCAGCCTAACTGCCAGTGGAACCTTACG AGGAAAAGACTAGCAGAGGGCGGGGTGCTACAGTGCTGGGGCGTTGTGGACTTCAGTGCA GATTCTGGGCAGTACGCCCTGAATGGGAACATGTTTATTGACAAGATTGTCAGGAAGTGC TGCGACCTTGGCGTACAGATGAACCGTAACCCATGCATTGTGCAACTGTTAGATATGGAG GTGCTATCCGATCCACATCAGCTCTTCGAGGAGCTTAACAAAGCTAAGCAGGCGGCAGCC AGTAAGAAACAGAAGCTGCAGCTCCTCTTCTGCCCAATGTCTGATCAGCATCCTGGGTAC AAGACGCTGAAGCTTATCTGCGAGACGCAGCTGGGGATCCAGACCCAGTGCTTCTTGAGC TTCCTCGCGAACAAACAACAGGGACAGGACCAGTACATGTCCAACCTTGCTCTGAAGATC AACGGCAAGATTGGAGGAAGCAACATCCAACTGTTTGGTGAATCGCTCCCGCGGATCTCC GGCGCGCCATACATGTTCATCGGCGCCGACGTGAATCACCCATCGCCGGGGAACGTCGAG AGCCCGTCGATTGCAGCAGTGGTGGCCTCGGTGGATCAAGGCGCCAGCAAGTACGTGCCA AGAATCCGCGCTCAGCCTCACCGCTGCGAGGTGATCCAGCACCTCGGCGACATGTGCAAG GAGCTCATCGGCGTGTTCGAGAAGCGGAACCGCGTGAAGCCCCAGAGGATCATCTACTTC CGCGACGGCGTCAGCGACGGTCAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATG GAGAAGGCGATCAAGACCAAGGACTACTCCCCGACGATCACCGTGATCGTGGCCAAGAAG CGGCACCACACCAGGCTGTTCCCCAAGGACCTGAACCAGCAGCAGACCAAGAACGGCAAC GTGCTCCCCGGCACGGTGGTGGACACCGGCGTGGTCGACCCGGCGGCGTACGACTTCTAC CTGTGCAGCCACAACGGGCTGATCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTG GACGAGCACGGCTTCGCCTCCGACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTC TTCGCCCGCTGCACCAAGCCGGTGTCGCTGGCCACGCCCGTCTACTACGCCGACCTCGCC GCCTACCGCGGCAGGCTCTACTACGAGGGCATGATGATGTCGCAGCCGCCACCGTCTTCC GCGGCGTCGGCGTCGTCGGCATCCTCCTCCGGCGCCGGCGCTTCCGACTTCAGGAGCTTC CCGGCGCTGCACGAGGATCTGGTGGACAACATGTTCTTCATCTGA

Peptide Sequence

PEP ID	Os04t0615700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31239185:31243430:1 gene:Os04g0615700 transcript:Os04t0615700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 2 description:Argonaute and Dicer protein, PAZ domain containing protein. (Os04t0615700-01)
Sequence	MEHERGGGGRGRGRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPG GGRGYGGGGGGGGRGYGGGGGGGGYESGGGRGYGGGGRGYESGGGRGPGGGGRGHESGGG GGRGGNVWAQPGRGRGGAPAPAPAPAPAARRIQDEGAARSSGTVERIASTEVVRVQPPAP PVAVSRSGTRVPMRRPDGGGSVSKAKVKLLVNHFIVKYRQASTVFHYDIDIKLDISSPKA SDKELSKGDFLTVKDELFKDESFRRLSSAVAYDGKRNLFTCAELPDGLFRVKVRSRTYIV SVEFKKKLPLSQLSELPVPREVLQGLDVIVREASSWRKIIIGQGFYSQGRSVPIGPDVVA LKGTQQTLKCTQKGLILCVDYSVMPFRKAGPVLDLVQKSVRYLDYRTTLNKHQLDTLKNE LKGQRVTVNHRRTKQKYIVKGLTDKPASQITFVDSESGQTKKLLDYYSQQYGKVIEYQML PCLDLSKSKDKQNYVPIELCDLLEGQRYPKASLNRNSDKTLKEMALIPASSRKEEILELV NADDGPCRGEIAQQFGISLDVQMMEVTGRTLPPPSLKLGTSSGQPPKFNIDQPNCQWNLT RKRLAEGGVLQCWGVVDFSADSGQYALNGNMFIDKIVRKCCDLGVQMNRNPCIVQLLDME VLSDPHQLFEELNKAKQAAASKKQKLQLLFCPMSDQHPGYKTLKLICETQLGIQTQCFLS FLANKQQGQDQYMSNLALKINGKIGGSNIQLFGESLPRISGAPYMFIGADVNHPSPGNVE SPSIAAVVASVDQGASKYVPRIRAQPHRCEVIQHLGDMCKELIGVFEKRNRVKPQRIIYF RDGVSDGQFDMVLNEELADMEKAIKTKDYSPTITVIVAKKRHHTRLFPKDLNQQQTKNGN VLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFV FARCTKPVSLATPVYYADLAAYRGRLYYEGMMMSQPPPSSAASASSASSSGAGASDFRSF PALHEDLVDNMFFI

Transcript Sequence

Transcript ID	Os04t0615700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31239185:31243430:1 gene:Os04g0615700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARGONAUTE 2 description:Argonaute and Dicer protein, PAZ domain containing protein. (Os04t0615700-01)
Sequence	CTCTTCTGCTTTTTAGCGAAATCCGAGAAAAAAATTGCCTGCAAAAAAAAAAATCGAAAC GTCGTTCTGATCGATCGGCCGTTCGAGTTCACGGCGGAGATGGAGCACGAGCGCGGTGGC GGTGGCCGCGGCCGCGGGAGGGGTCGCGGTGGCGGGCGTGGCGGCGGTGGCGGCGATGGT CGCGGAGGCGGTTATGGTGGTGCTGGTGGTGGTGGTGTCGGCGGGCGCGGTGGGCGTGGG CCTCCTGGTGGTGGTGGTGGACGCGGGTACGAGCCCGGCGGCGGGCGTGGGTACGGTGGC GGCGGCGGCGGTGGTGGACGTGGGTATGGCGGCGGAGGCGGCGGTGGTGGGTACGAGTCC GGCGGTGGGCGTGGGTATGGCGGCGGTGGACGTGGGTATGAATCCGGCGGTGGGCGTGGA CCTGGCGGCGGCGGCCGTGGGCACGAGTCCGGCGGTGGCGGTGGCCGCGGCGGGAACGTG TGGGCGCAGCCGGGGAGAGGGCGCGGAGGAGCCCCCGCCCCGGCGCCGGCGCCAGCACCA GCAGCGAGGAGGATCCAGGACGAGGGGGCCGCGAGGTCGTCGGGTACCGTTGAGCGCATT GCTTCTACTGAGGTTGTAAGAGTACAACCACCTGCACCCCCAGTTGCTGTGTCTCGTAGT GGCACGCGTGTGCCAATGCGAAGACCTGATGGTGGAGGCTCAGTATCGAAAGCCAAGGTC AAATTGTTGGTGAACCATTTTATAGTTAAGTACCGACAGGCATCAACTGTTTTTCACTAT GACATAGACATCAAGCTTGATATAAGTTCCCCCAAGGCTTCAGACAAGGAGCTATCCAAG GGAGATTTTCTTACTGTCAAGGACGAGCTCTTCAAGGATGAGAGCTTTCGGCGGCTTTCA TCAGCTGTTGCTTATGATGGAAAAAGAAATTTATTTACTTGTGCTGAGCTACCAGATGGT TTGTTTCGTGTCAAAGTCCGTTCACGGACTTACATTGTATCTGTGGAGTTCAAGAAGAAG CTTCCTTTGAGCCAACTCTCGGAACTGCCTGTGCCCAGAGAGGTCTTGCAGGGGCTTGAT GTCATTGTGCGTGAGGCCTCTAGCTGGCGCAAGATTATCATTGGTCAGGGATTTTACTCG CAGGGCCGCAGTGTGCCCATTGGGCCGGATGTTGTAGCTCTCAAAGGAACCCAGCAGACC CTGAAATGCACTCAGAAAGGACTGATCCTTTGTGTGGACTATTCGGTTATGCCGTTTCGC AAAGCTGGACCTGTGTTGGATCTTGTTCAGAAGTCTGTGAGATACCTTGACTACAGGACA ACACTAAACAAACACCAATTGGACACTTTGAAGAATGAACTCAAAGGCCAGCGTGTCACT GTAAATCATAGGAGGACAAAGCAGAAGTACATTGTTAAAGGTTTGACTGATAAACCTGCA AGTCAGATAACTTTTGTAGATTCTGAATCAGGACAGACCAAGAAGCTTCTTGATTACTAT TCGCAGCAGTATGGCAAGGTTATTGAGTATCAAATGCTTCCATGCTTGGATTTGAGCAAG AGCAAGGACAAGCAAAACTATGTGCCGATTGAATTGTGTGATCTTCTTGAAGGGCAGAGA TACCCAAAAGCAAGCTTAAATAGGAATTCTGATAAAACACTGAAAGAAATGGCTTTGATC CCTGCCTCAAGTAGGAAGGAGGAGATTCTGGAGTTGGTGAATGCTGACGATGGGCCTTGC AGGGGTGAAATTGCTCAGCAGTTCGGGATTTCTTTGGATGTACAAATGATGGAAGTCACT GGTAGGACCCTTCCTCCTCCCAGCCTAAAACTTGGCACCTCCAGTGGCCAACCCCCCAAA TTCAATATTGATCAGCCTAACTGCCAGTGGAACCTTACGAGGAAAAGACTAGCAGAGGGC GGGGTGCTACAGTGCTGGGGCGTTGTGGACTTCAGTGCAGATTCTGGGCAGTACGCCCTG AATGGGAACATGTTTATTGACAAGATTGTCAGGAAGTGCTGCGACCTTGGCGTACAGATG AACCGTAACCCATGCATTGTGCAACTGTTAGATATGGAGGTGCTATCCGATCCACATCAG CTCTTCGAGGAGCTTAACAAAGCTAAGCAGGCGGCAGCCAGTAAGAAACAGAAGCTGCAG CTCCTCTTCTGCCCAATGTCTGATCAGCATCCTGGGTACAAGACGCTGAAGCTTATCTGC GAGACGCAGCTGGGGATCCAGACCCAGTGCTTCTTGAGCTTCCTCGCGAACAAACAACAG GGACAGGACCAGTACATGTCCAACCTTGCTCTGAAGATCAACGGCAAGATTGGAGGAAGC AACATCCAACTGTTTGGTGAATCGCTCCCGCGGATCTCCGGCGCGCCATACATGTTCATC GGCGCCGACGTGAATCACCCATCGCCGGGGAACGTCGAGAGCCCGTCGATTGCAGCAGTG GTGGCCTCGGTGGATCAAGGCGCCAGCAAGTACGTGCCAAGAATCCGCGCTCAGCCTCAC CGCTGCGAGGTGATCCAGCACCTCGGCGACATGTGCAAGGAGCTCATCGGCGTGTTCGAG AAGCGGAACCGCGTGAAGCCCCAGAGGATCATCTACTTCCGCGACGGCGTCAGCGACGGT CAGTTCGACATGGTGCTGAACGAGGAGCTGGCGGACATGGAGAAGGCGATCAAGACCAAG GACTACTCCCCGACGATCACCGTGATCGTGGCCAAGAAGCGGCACCACACCAGGCTGTTC CCCAAGGACCTGAACCAGCAGCAGACCAAGAACGGCAACGTGCTCCCCGGCACGGTGGTG GACACCGGCGTGGTCGACCCGGCGGCGTACGACTTCTACCTGTGCAGCCACAACGGGCTG ATCGGGACGAGCCGGCCGACGCACTACTACAGCCTTCTGGACGAGCACGGCTTCGCCTCC GACGACCTGCAGAAGCTGGTGTACAACCTCTGCTTCGTCTTCGCCCGCTGCACCAAGCCG GTGTCGCTGGCCACGCCCGTCTACTACGCCGACCTCGCCGCCTACCGCGGCAGGCTCTAC TACGAGGGCATGATGATGTCGCAGCCGCCACCGTCTTCCGCGGCGTCGGCGTCGTCGGCA TCCTCCTCCGGCGCCGGCGCTTCCGACTTCAGGAGCTTCCCGGCGCTGCACGAGGATCTG GTGGACAACATGTTCTTCATCTGACGACAGCCTTTCGTCGCATGGTCCGGTGGTCTCTCT CTGTTCTTAGTTTACCTCTTACTGCGTGGAGTCTCAGGTCATAGACTCATTAGTCACAGA CTCACAGGTTGTCTATCTTTTGACTTTTGTTGACCGTGTCGTCGGTCTTGGTAGTTGGTA GTCTTATACATACTGTTGAGGCTGCATTATGGTTGCACAAGAAAGTTTAAGAGTACTATA CTGGTACTCTGTATTTTGCAATTCTCGTGCGGATGCTATGGAGTAGGATGTTTCT