Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0615000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:31205267:31214632:1 gene:Os04g0615000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF 1 description:Control of lateral leaf growth, panicle number (Os04t0615000-01)
Sequence

ATGAAGCCTTCGGACGATAAGGCGCAGCTCTCCGGTTTGGCGCAATCAGAAGAATCGTCA
CTTGATGTGGATCACCAGTCATTTCCTTGTTCTCCATCAATCCAACCGGTTGCTTCTGGG
TGCACACACACAGAGAACAGCGCAGCATACTTCTTATGGCCGACATCCAACCTACAGCAT
TGTGCAGCCGAGGGACGTGCAAACTACTTTGGAAACCTTCAGAAAGGATTGTTGCCAAGG
CACCCTGGTCGGTTGCCCAAAGGTCAGCAAGCAAATAGCTTGCTTGACTTGATGACTATA
AGAGCTTTCCATAGCAAGATATTGCGGCGTTTTAGCCTCGGGACAGCAGTGGGATTCCGC
ATCAGGAAAGGGGATCTAACAGATATCCCTGCAATCCTTGTCTTTGTTGCTCGCAAGGTT
CATAAGAAGTGGCTTAATCCAGCACAATGTCTTCCTGCTATTCTTGAGGGTCCAGGAGGT
GTTTGGTGTGATGTTGATGTTGTTGAATTTTCGTACTACGGTGCACCGGCTCAAACACCT
AAAGAGCAAATGTTCAGTGAGCTTGTTGATAAGTTATGTGGCAGTGACGAATGTATTGGT
TCAGGCTCTCAGGTTGCAAGCCATGAAACTTTTGGTACTTTGGGTGCAATTGTGAAACGG
CGCACTGGCAACAAGCAGGTTGGTTTCCTCACTAACCATCATGTCGCGGTTGACTTGGAC
TACCCTAATCAGAAGATGTTTCATCCATTACCACCCAATCTTGGGCCTGGCGTTTATCTT
GGAGCTGTTGAAAGAGCAACTTCTTTCATCACAGATGACGTTTGGTATGGAATCTATGCT
GGAACAAACCCAGAGACATTTGTACGAGCTGACGGTGCATTTATCCCATTTGCTGATGAC
TTTGACATTTCCACCGTCACGACTGTAGTTAGGGGAGTCGGTGACATTGGGGATGTCAAG
GTTATAGATCTGCAGTGTCCGCTCAATAGCCTCATAGGGAGGCAAGTATGCAAAGTTGGC
AGAAGCTCTGGTCACACAACTGGGACTGTGATGGCCTATGCCCTTGAGTACAATGACGAG
AAAGGAATATGCTTCTTCACAGACATCCTTGTTGTTGGTGAGAACCGCCAAACATTTGAT
TTGGAAGGTGATAGCGGAAGCCTTATTATCCTGACTAGCCAAGATGGTGAGAAGCCGCGT
CCAATTGGAATTATATGGGGTGGCACAGCAAATCGTGGGAGGTTGAAGCTTACAAGTGAT
CATGGCCCTGAAAACTGGACTAGTGGGGTTGATCTTGGCCGTCTACTCGACCGTCTGGAA
CTTGATATTATCATTACCAATGAATCACTCCAAGATGCCGTGCAGCAGCAAAGATTTGCT
TTGGTGGCCGCCGTTACCTCAGCTGTTGGGGAGTCTTCCGGGGTGCCTGTCGCCATCCCG
GAAGAGAAGATCGAAGAGATCTTCGAGCCATTGGGGATCCAAATCCAGCAACTGCCTCGC
CATGACGTGGCGGCCTCTGGAACTGAAGGGGAGGAGGCATCCAACACGGTGGTCAATGTG
GAAGAGCACCAGTTCATCTCAAACTTCGTCGGTATGTCGCCCGTGCGCGACGACCAAGAC
GCTCCGAGGAGCATCACCAACCTGAACAACCCCTCCGAGGAAGAACTCGCCATGTCGCTC
CATCTGGGTGACCGAGAGCCCAAGCGGCTCCGTTCGGACTCCGGATCAAGCCTTGACCTG
GAGAAATGA

Peptide Sequence

PEP ID

Os04t0615000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:31205267:31214632:1 gene:Os04g0615000 transcript:Os04t0615000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF 1 description:Control of lateral leaf growth, panicle number (Os04t0615000-01)
Sequence

MKPSDDKAQLSGLAQSEESSLDVDHQSFPCSPSIQPVASGCTHTENSAAYFLWPTSNLQH
CAAEGRANYFGNLQKGLLPRHPGRLPKGQQANSLLDLMTIRAFHSKILRRFSLGTAVGFR
IRKGDLTDIPAILVFVARKVHKKWLNPAQCLPAILEGPGGVWCDVDVVEFSYYGAPAQTP
KEQMFSELVDKLCGSDECIGSGSQVASHETFGTLGAIVKRRTGNKQVGFLTNHHVAVDLD
YPNQKMFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPFADD
FDISTVTTVVRGVGDIGDVKVIDLQCPLNSLIGRQVCKVGRSSGHTTGTVMAYALEYNDE
KGICFFTDILVVGENRQTFDLEGDSGSLIILTSQDGEKPRPIGIIWGGTANRGRLKLTSD
HGPENWTSGVDLGRLLDRLELDIIITNESLQDAVQQQRFALVAAVTSAVGESSGVPVAIP
EEKIEEIFEPLGIQIQQLPRHDVAASGTEGEEASNTVVNVEEHQFISNFVGMSPVRDDQD
APRSITNLNNPSEEELAMSLHLGDREPKRLRSDSGSSLDLEK

Transcript Sequence

Transcript ID

Os04t0615000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31205267:31214632:1 gene:Os04g0615000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NARROW LEAF 1 description:Control of lateral leaf growth, panicle number (Os04t0615000-01)
Sequence

CGCTTTCGGCATTCGTTATCTACCTGTCCATTAGCCTTCAGGATCATGCTTTCTGACTTG
CTTGTTCTCATTCTTAGGGCCATAACTTCAGCTTCTCCCATCTATAATAGGTTCGCAAAC
TGTTCAGCACAATGAAGCCTTCGGACGATAAGGCGCAGCTCTCCGGTTTGGCGCAATCAG
AAGAATCGTCACTTGATGTGGATCACCAGTCATTTCCTTGTTCTCCATCAATCCAACCGG
TTGCTTCTGGGTGCACACACACAGAGAACAGCGCAGCATACTTCTTATGGCCGACATCCA
ACCTACAGCATTGTGCAGCCGAGGGACGTGCAAACTACTTTGGAAACCTTCAGAAAGGAT
TGTTGCCAAGGCACCCTGGTCGGTTGCCCAAAGGTCAGCAAGCAAATAGCTTGCTTGACT
TGATGACTATAAGAGCTTTCCATAGCAAGATATTGCGGCGTTTTAGCCTCGGGACAGCAG
TGGGATTCCGCATCAGGAAAGGGGATCTAACAGATATCCCTGCAATCCTTGTCTTTGTTG
CTCGCAAGGTTCATAAGAAGTGGCTTAATCCAGCACAATGTCTTCCTGCTATTCTTGAGG
GTCCAGGAGGTGTTTGGTGTGATGTTGATGTTGTTGAATTTTCGTACTACGGTGCACCGG
CTCAAACACCTAAAGAGCAAATGTTCAGTGAGCTTGTTGATAAGTTATGTGGCAGTGACG
AATGTATTGGTTCAGGCTCTCAGGTTGCAAGCCATGAAACTTTTGGTACTTTGGGTGCAA
TTGTGAAACGGCGCACTGGCAACAAGCAGGTTGGTTTCCTCACTAACCATCATGTCGCGG
TTGACTTGGACTACCCTAATCAGAAGATGTTTCATCCATTACCACCCAATCTTGGGCCTG
GCGTTTATCTTGGAGCTGTTGAAAGAGCAACTTCTTTCATCACAGATGACGTTTGGTATG
GAATCTATGCTGGAACAAACCCAGAGACATTTGTACGAGCTGACGGTGCATTTATCCCAT
TTGCTGATGACTTTGACATTTCCACCGTCACGACTGTAGTTAGGGGAGTCGGTGACATTG
GGGATGTCAAGGTTATAGATCTGCAGTGTCCGCTCAATAGCCTCATAGGGAGGCAAGTAT
GCAAAGTTGGCAGAAGCTCTGGTCACACAACTGGGACTGTGATGGCCTATGCCCTTGAGT
ACAATGACGAGAAAGGAATATGCTTCTTCACAGACATCCTTGTTGTTGGTGAGAACCGCC
AAACATTTGATTTGGAAGGTGATAGCGGAAGCCTTATTATCCTGACTAGCCAAGATGGTG
AGAAGCCGCGTCCAATTGGAATTATATGGGGTGGCACAGCAAATCGTGGGAGGTTGAAGC
TTACAAGTGATCATGGCCCTGAAAACTGGACTAGTGGGGTTGATCTTGGCCGTCTACTCG
ACCGTCTGGAACTTGATATTATCATTACCAATGAATCACTCCAAGATGCCGTGCAGCAGC
AAAGATTTGCTTTGGTGGCCGCCGTTACCTCAGCTGTTGGGGAGTCTTCCGGGGTGCCTG
TCGCCATCCCGGAAGAGAAGATCGAAGAGATCTTCGAGCCATTGGGGATCCAAATCCAGC
AACTGCCTCGCCATGACGTGGCGGCCTCTGGAACTGAAGGGGAGGAGGCATCCAACACGG
TGGTCAATGTGGAAGAGCACCAGTTCATCTCAAACTTCGTCGGTATGTCGCCCGTGCGCG
ACGACCAAGACGCTCCGAGGAGCATCACCAACCTGAACAACCCCTCCGAGGAAGAACTCG
CCATGTCGCTCCATCTGGGTGACCGAGAGCCCAAGCGGCTCCGTTCGGACTCCGGATCAA
GCCTTGACCTGGAGAAATGAAGTGCAAAAAGTGCTGGTTCTGAATTTCTGATTCTGGTTC
TTCAGAGTTTATTGTCATTGTGGACAGCCAAAAGTAGTAGTAGATCAAAAGACCTCATAT
GCAGTTCAGAAAAATTGAACCTGCAGTAAGCTTCGGTGAGCTTGAATGGCTTTGGCAAGC
ATATCATGTAACATGATGTATTATTATTACTACAATTGATTCAGCCCCTTGTAGGATGTT
AGGTGCTAGTCCTGCAGTTTTGCTGTGCTCATGATCGTGAGACCTGATATACACCATTGC
CGGATCCC