Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0614650-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:31189280:31193896:1 gene:Os04g0614650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.8 protein. (Os04t0614650-00)
Sequence	ATTCTCATAGTGCCACTGTTGCAGGTACATGATGATGACAAGGAAAATCTAGTGAATGGT AATTCAAATCTGCAAGTGAAGGAAGCACACAACGATGAGGATGATGGCACAGGATCAGAC GGTTTTGAGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAAGTGGTGGAAGAAGAA AAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAACAAGCGCTCACGAGA GAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTAACGAGGCGTATTGAA GAGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAAGCAGAAAACAAGCAG AACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCTGATAAAGATAAGGAG CTGGCTGATGCAACTCAGTCACTGAAGGAGCTGGGTTCTGAGCTTGAGAGCTCAAAGGAG AGGATTCAAGAAATTGAAGCTGAATTAGCTGCGTCCGCTGACAAGCTCCACAAACTTGAA GAGCTCAAGGATGAAAGAAGCTTGCATGCTGCGCAGGAGGCGAAGAGGGCCTCAGAACTT GACAAGACGCTTGAAACGGCACAGTTGAACATGAAAGAGATGGAAGCTCAGATCAGTTCT CTTCAAGAAGAGATAAAGGGGCATCAAGATAAGGCCATTGATCATCAGCAAGTGGAAGAA TCACTGAGAAGCACGCTCTCAGAACTCAAGATGGTACAAGAGGCACTGGAGTTGTCAAAA TCACAAGTGGACGATTTGGAGCAGAAGCTTGCCTCTCAGGATGCTAACATCAGTCATCTC ACTGAAGAGTTGAGTCTCCATCGTTCATCTGAAGAATCGCTGAAGGAAAAAACTCTTAAA TTAGAGAATGAACTTTCTTCTGCGCATGAAGAGCTGCAAGCAAAGATCCTGAATTTGCAG GAAATGGAGATCAAGCTCGAAGAGCAGGCAAAGGAAAAACAGACTTGGGAAGCTACATTG GAGAAGCAACAGGAGCAGATACTCAACCTGCAGACTGAGCTCGATGAATCAAAGGGCGGA AATGAAACTCTCCGAGGGACTATAGCTGATCTTAACTCAAAACTTGCAGAGAGAGACTCT CTTCTGCGTCAAGCTGAAGATGAGCATGCTAAAGCACAGCTGCTCCTCTCAGAAGCCCTG TCACATAAAGATGAACTGGAGGTAAATCTGAAATCTATCAATGAGCAGCATGGTGAGTCC AGAGCTGCTGCAGAAAATGCAAGCCAGAAGATTCTAGAGCTTGAAGCACTACTCCAGACA CTTCATGCTACTGAAGAGGCTTTGAAGTTACAGCTAGAAGAGGCTGAGGCAAGGGTGGAA GTTGCTGAGAAGAAAGGTTCAGATCTTGAGCAACTGCTCGGTGAATCTGAGAACAAATTA GTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAGCGTGTTCAACAAGAGGCAGCTTCA TCAGCAGAAAAGGAGAAGCTGCTTGAAGAAGCAACGAACAGTGTGGAGGCGTACAAAGAA AAGATCAATGAGTTGCAAGCATCTCTGGATTCCACGACGTCTAAAAATCAGCTGCTTGAA CAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGAGCATCAAGAACAAGCTCATTCGGTT CACGAAAGAAGTCTTGAACTGGAGAGCCTGCTTCATACATCGAAGTCTGATGCTGAAGTT GCACACACCCGGACACAGGATCTTGAAAATGAGCTGAACACTGCAAATGAAAAGTTCAAG GAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAAGGTTTCTCAGCTTTCCGATGAACTA GAAGCATACCAGACAAAAGCAGCTAGTCTTGAAGCTGTGATGGAATCTGCAAGCGAAAAG GAGAAAGAGCTTGTGGAATCTCTGGGTCAAATTACTGAAGAAAAGAAGAAACTTGAACTA CTAGTATTGGAGTATGAAGAGAAGACCGAAGAATACTTAAAGGAAAAACAATCTTTGGAA GAGAGGTTGCAGAGCCAAGAATCCAAGGTGCTGGCTTTAGAGGAATCGTTGGTGAAAATG GGAGAAGAAAAAGAAAGTCATGAGGGCACCATTGCTGATCTTAATCTACAATTATCCAAT AAGAATGACATGTACATGCAATTGGAGTCCCAGTTAAGTCAGGCCGGGGATGATCATAGC AAAACAAGATCACTTCTATCTGAAGCACAATTGCACAAAGAGGAACTGGAGTTAAACTTG AAATCTCTTAATGATCTGCACGTCGAATCCAAAACAGCTGCGGAGTCTGCATTACAGAGA ATTGCAGAGCTTGAAACTCAGGTTCAGGAATTAAGTGCTGCTGAACAAAGTTTGAAGTCA CACCTTACTGAGTTTGAGTCAAAGTTGGCATCTGCTGAGAAAAAGAGTATGGATCTTGAG CAAGAGCTTAAAGATGCTACAGAGGAATGCAACAGTTCCCGTTTGAGAGTCGATGAGCTT TCTGGGGAGCTTGAAGAGTACAAAGAGAAAAGAACTAGCCTCGAGGCTTCATTACTCGAA GCAAAACAAAAGGAGGCTGAGTTGTCAGAGAAGTTGGATCAAGTTAATGAAGAAAAGGAG AAATTTGAAGAGCTGTCCAAGAAAGCTACCATAAAACATTTGGAAGCAGAGAACCAGGTC CAAGCCTTGCAAGGCGAACTAGAATCGGCCCGCCATAAACTGGAAGAGGTGGAGTCTGAT CTTGAGGCCCTTGGTATTAGAGAAACCTCAGTACTTGACAAGCTTAAATCTGCCGAGGAG CAGCTTGAGCACAAAGGAAAGGCACTAGAACATGCCACTTCCAAGAAAATTGATCTGGAA GCGCTGTACCAGTCCTTACTTGAAGACACAGAGATGAAGCTTCAGCAAGCAGGGGAGAAC TTGACCCAGAAGGAGACAGAATGCCAGGAGTTGTCTGAAAAATTGAAGGCAGCTGAGGAA CAAGCAGCATCTTATCAAGCAAAAGCAACTGCAGCCGCAGAAGAGGTGGAATCCGTGAAG GTGGAGCTTGAAGCCTTTGAGACGGAGATATCTACTCTTGAGACCACCATTGAAGAACTT AAGACCAAGGCCTCCAATGCCGAGTCAAGGGCCGAACAGGCTTTGGTTGAGAGTGCAATG ATGAGTGAGACAAACCAGGCCCTAAAAGAGGACCTTGATGCTAAGCTGGCCATGCTTCGT GAACTACAGGAACAGTTTGATTCTACTCATGCTGAGAAAGAAGAAGTTTTCACGAAGCTA TCTGCGCATGAGAAAACGATAGAGCATTTGACTGAGGTGCACAGTAGAGGCTTAGAACTC CACGCTACAGCTGAATCAAAGAATGCAGAACTTGAAGCGCAAATGCATGAAGCTCTTGAG ACAATAGGGAAGAAAGATTCAGAAGTAAAAGACTTGAATGAGAGGCTGGCTGCTCTTGAG TCCGAGATTGAAAGTTTGACGCATGTGAATGAAGCCATGAAACAGGAAATCAATGCTAAG CTGGTCAAGGTTGATGAGCTGCAGGAGAAATTGAGTTCCATAAGTTCTGAGAAAGAAGAA GTTGCAGAGAAAGTGGTTGTTCATGAGAAAACAATAGAACATTTGAGAGAAGAGCACTCA AGGGGCTTGGAGCTCCAGTCTGCTGCTGAATCGAGATCTGCAGAAATTGAGAATGAACTG CGTGAAGTTCTTGAAACAGTAGCTCAGAAAGAAGCTGAAGTTACAGACTTGAAGGAAAAG CTAGTTTCACTTGAAACTGAGAATGAAAAACTGGTTGGTATAAATGAGGCCCTGAAAGGG GAACTGGATACTAAGGTGGCAATGTTCGATGAGTTACAGGAACAGTTCAGCTCAACTCAT GCTGAAAAGGAAGAAGCTGCAGAGAAGCTAGCTGTTCATGAGAGAACAATTTCGCACCTG ACAGAAGTGCACACGAGAAGCTTGGAACTCCACTCTGCAGCTGAGTCAAAGAACGAAGAA ATTGAAAGTAAGCTCCATGAGGCCCTTGAGATGGCAGCACAGAAAGAAGCTGAAGTTAAA GACCTAAGCAAGAAGCTGGATGCTCTTGAAATAGAGTTGGGATATTATGAGGAGCAGGCA ACTGAAGCTGCTGCTGCTGAAGAAACGCATAAGATTAAGTTTGATGAAGCTGTGCACAAA ATAAAAAGCCTAGAAGAACAACTTGCAGTAACAGAAAACAAGGTTGAGCTTTTCCATACC GAGAAAGAAAATTTGGTTATTGCAAATAGCAAATTGAATGAGGAGCTGGAGTTACATCAG AACAAGCTGAATGAATTGCAAGTAGCCCTTGCTGCAGCAGTAGCAGAAAAGGAGGGGTCA TCTGAAGAGATTCATTCATTGAGGAAAACACTAGATGGCATGATTCAACGGAAGGAAGAG CTGGAAAGCCAGGTAATGAAGTTATTCATAATTTTGTTAGTAGTTTGTTATTGCTTCTTA TCTCCTGTAGCTCTCTCTCAACAGTTATATTGCTATTACATATTTTGTAGCTTTAAGAAA GTTATCTCCCTTTCAGGTATCTTCTACTGTCGAAGAGCATGA

Peptide Sequence

PEP ID	Os04t0614650-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:31189280:31193896:1 gene:Os04g0614650 transcript:Os04t0614650-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.8 protein. (Os04t0614650-00)
Sequence	ILIVPLLQVHDDDKENLVNGNSNLQVKEAHNDEDDGTGSDGFELIDVKENFDSAKVVEEE KASPIEQGKTAALEEQALTRESAMLNQEAKQLEELTRRIEELELEKEKLVKGVTEAENKQ NLHYTSLQEAQRSLADKDKELADATQSLKELGSELESSKERIQEIEAELAASADKLHKLE ELKDERSLHAAQEAKRASELDKTLETAQLNMKEMEAQISSLQEEIKGHQDKAIDHQQVEE SLRSTLSELKMVQEALELSKSQVDDLEQKLASQDANISHLTEELSLHRSSEESLKEKTLK LENELSSAHEELQAKILNLQEMEIKLEEQAKEKQTWEATLEKQQEQILNLQTELDESKGG NETLRGTIADLNSKLAERDSLLRQAEDEHAKAQLLLSEALSHKDELEVNLKSINEQHGES RAAAENASQKILELEALLQTLHATEEALKLQLEEAEARVEVAEKKGSDLEQLLGESENKL VASSGELKLLEERVQQEAASSAEKEKLLEEATNSVEAYKEKINELQASLDSTTSKNQLLE QEVKDLSDKFTEHQEQAHSVHERSLELESLLHTSKSDAEVAHTRTQDLENELNTANEKFK EVEADLEQYRSKVSQLSDELEAYQTKAASLEAVMESASEKEKELVESLGQITEEKKKLEL LVLEYEEKTEEYLKEKQSLEERLQSQESKVLALEESLVKMGEEKESHEGTIADLNLQLSN KNDMYMQLESQLSQAGDDHSKTRSLLSEAQLHKEELELNLKSLNDLHVESKTAAESALQR IAELETQVQELSAAEQSLKSHLTEFESKLASAEKKSMDLEQELKDATEECNSSRLRVDEL SGELEEYKEKRTSLEASLLEAKQKEAELSEKLDQVNEEKEKFEELSKKATIKHLEAENQV QALQGELESARHKLEEVESDLEALGIRETSVLDKLKSAEEQLEHKGKALEHATSKKIDLE ALYQSLLEDTEMKLQQAGENLTQKETECQELSEKLKAAEEQAASYQAKATAAAEEVESVK VELEAFETEISTLETTIEELKTKASNAESRAEQALVESAMMSETNQALKEDLDAKLAMLR ELQEQFDSTHAEKEEVFTKLSAHEKTIEHLTEVHSRGLELHATAESKNAELEAQMHEALE TIGKKDSEVKDLNERLAALESEIESLTHVNEAMKQEINAKLVKVDELQEKLSSISSEKEE VAEKVVVHEKTIEHLREEHSRGLELQSAAESRSAEIENELREVLETVAQKEAEVTDLKEK LVSLETENEKLVGINEALKGELDTKVAMFDELQEQFSSTHAEKEEAAEKLAVHERTISHL TEVHTRSLELHSAAESKNEEIESKLHEALEMAAQKEAEVKDLSKKLDALEIELGYYEEQA TEAAAAEETHKIKFDEAVHKIKSLEEQLAVTENKVELFHTEKENLVIANSKLNEELELHQ NKLNELQVALAAAVAEKEGSSEEIHSLRKTLDGMIQRKEELESQVMKLFIILLVVCYCFL SPVALSQQLYCYYIFCSFKKVISLSGIFYCRRA

Transcript Sequence

Transcript ID	Os04t0614650-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31189280:31193896:1 gene:Os04g0614650 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0126B18.8 protein. (Os04t0614650-00)
Sequence	TCCAGAGATCATTGAATTCTCATAGTGCCACTGTTGCAGGTACATGATGATGACAAGGAA AATCTAGTGAATGGTAATTCAAATCTGCAAGTGAAGGAAGCACACAACGATGAGGATGAT GGCACAGGATCAGACGGTTTTGAGCTGATAGATGTGAAGGAGAATTTTGATTCTGCAAAA GTGGTGGAAGAAGAAAAGGCTAGTCCCATAGAGCAAGGAAAAACTGCAGCGCTTGAAGAA CAAGCGCTCACGAGAGAATCTGCCATGCTAAACCAAGAAGCAAAACAACTGGAAGAACTA ACGAGGCGTATTGAAGAGCTTGAATTGGAAAAGGAGAAATTGGTAAAGGGCGTGACAGAA GCAGAAAACAAGCAGAACCTGCATTACACTTCTCTACAAGAAGCACAGAGATCTTTAGCT GATAAAGATAAGGAGCTGGCTGATGCAACTCAGTCACTGAAGGAGCTGGGTTCTGAGCTT GAGAGCTCAAAGGAGAGGATTCAAGAAATTGAAGCTGAATTAGCTGCGTCCGCTGACAAG CTCCACAAACTTGAAGAGCTCAAGGATGAAAGAAGCTTGCATGCTGCGCAGGAGGCGAAG AGGGCCTCAGAACTTGACAAGACGCTTGAAACGGCACAGTTGAACATGAAAGAGATGGAA GCTCAGATCAGTTCTCTTCAAGAAGAGATAAAGGGGCATCAAGATAAGGCCATTGATCAT CAGCAAGTGGAAGAATCACTGAGAAGCACGCTCTCAGAACTCAAGATGGTACAAGAGGCA CTGGAGTTGTCAAAATCACAAGTGGACGATTTGGAGCAGAAGCTTGCCTCTCAGGATGCT AACATCAGTCATCTCACTGAAGAGTTGAGTCTCCATCGTTCATCTGAAGAATCGCTGAAG GAAAAAACTCTTAAATTAGAGAATGAACTTTCTTCTGCGCATGAAGAGCTGCAAGCAAAG ATCCTGAATTTGCAGGAAATGGAGATCAAGCTCGAAGAGCAGGCAAAGGAAAAACAGACT TGGGAAGCTACATTGGAGAAGCAACAGGAGCAGATACTCAACCTGCAGACTGAGCTCGAT GAATCAAAGGGCGGAAATGAAACTCTCCGAGGGACTATAGCTGATCTTAACTCAAAACTT GCAGAGAGAGACTCTCTTCTGCGTCAAGCTGAAGATGAGCATGCTAAAGCACAGCTGCTC CTCTCAGAAGCCCTGTCACATAAAGATGAACTGGAGGTAAATCTGAAATCTATCAATGAG CAGCATGGTGAGTCCAGAGCTGCTGCAGAAAATGCAAGCCAGAAGATTCTAGAGCTTGAA GCACTACTCCAGACACTTCATGCTACTGAAGAGGCTTTGAAGTTACAGCTAGAAGAGGCT GAGGCAAGGGTGGAAGTTGCTGAGAAGAAAGGTTCAGATCTTGAGCAACTGCTCGGTGAA TCTGAGAACAAATTAGTCGCTTCCAGTGGAGAACTAAAGTTGTTGGAAGAGCGTGTTCAA CAAGAGGCAGCTTCATCAGCAGAAAAGGAGAAGCTGCTTGAAGAAGCAACGAACAGTGTG GAGGCGTACAAAGAAAAGATCAATGAGTTGCAAGCATCTCTGGATTCCACGACGTCTAAA AATCAGCTGCTTGAACAAGAAGTCAAGGACCTGTCTGACAAGTTTACAGAGCATCAAGAA CAAGCTCATTCGGTTCACGAAAGAAGTCTTGAACTGGAGAGCCTGCTTCATACATCGAAG TCTGATGCTGAAGTTGCACACACCCGGACACAGGATCTTGAAAATGAGCTGAACACTGCA AATGAAAAGTTCAAGGAGGTTGAAGCAGACCTAGAACAGTACAGGAGCAAGGTTTCTCAG CTTTCCGATGAACTAGAAGCATACCAGACAAAAGCAGCTAGTCTTGAAGCTGTGATGGAA TCTGCAAGCGAAAAGGAGAAAGAGCTTGTGGAATCTCTGGGTCAAATTACTGAAGAAAAG AAGAAACTTGAACTACTAGTATTGGAGTATGAAGAGAAGACCGAAGAATACTTAAAGGAA AAACAATCTTTGGAAGAGAGGTTGCAGAGCCAAGAATCCAAGGTGCTGGCTTTAGAGGAA TCGTTGGTGAAAATGGGAGAAGAAAAAGAAAGTCATGAGGGCACCATTGCTGATCTTAAT CTACAATTATCCAATAAGAATGACATGTACATGCAATTGGAGTCCCAGTTAAGTCAGGCC GGGGATGATCATAGCAAAACAAGATCACTTCTATCTGAAGCACAATTGCACAAAGAGGAA CTGGAGTTAAACTTGAAATCTCTTAATGATCTGCACGTCGAATCCAAAACAGCTGCGGAG TCTGCATTACAGAGAATTGCAGAGCTTGAAACTCAGGTTCAGGAATTAAGTGCTGCTGAA CAAAGTTTGAAGTCACACCTTACTGAGTTTGAGTCAAAGTTGGCATCTGCTGAGAAAAAG AGTATGGATCTTGAGCAAGAGCTTAAAGATGCTACAGAGGAATGCAACAGTTCCCGTTTG AGAGTCGATGAGCTTTCTGGGGAGCTTGAAGAGTACAAAGAGAAAAGAACTAGCCTCGAG GCTTCATTACTCGAAGCAAAACAAAAGGAGGCTGAGTTGTCAGAGAAGTTGGATCAAGTT AATGAAGAAAAGGAGAAATTTGAAGAGCTGTCCAAGAAAGCTACCATAAAACATTTGGAA GCAGAGAACCAGGTCCAAGCCTTGCAAGGCGAACTAGAATCGGCCCGCCATAAACTGGAA GAGGTGGAGTCTGATCTTGAGGCCCTTGGTATTAGAGAAACCTCAGTACTTGACAAGCTT AAATCTGCCGAGGAGCAGCTTGAGCACAAAGGAAAGGCACTAGAACATGCCACTTCCAAG AAAATTGATCTGGAAGCGCTGTACCAGTCCTTACTTGAAGACACAGAGATGAAGCTTCAG CAAGCAGGGGAGAACTTGACCCAGAAGGAGACAGAATGCCAGGAGTTGTCTGAAAAATTG AAGGCAGCTGAGGAACAAGCAGCATCTTATCAAGCAAAAGCAACTGCAGCCGCAGAAGAG GTGGAATCCGTGAAGGTGGAGCTTGAAGCCTTTGAGACGGAGATATCTACTCTTGAGACC ACCATTGAAGAACTTAAGACCAAGGCCTCCAATGCCGAGTCAAGGGCCGAACAGGCTTTG GTTGAGAGTGCAATGATGAGTGAGACAAACCAGGCCCTAAAAGAGGACCTTGATGCTAAG CTGGCCATGCTTCGTGAACTACAGGAACAGTTTGATTCTACTCATGCTGAGAAAGAAGAA GTTTTCACGAAGCTATCTGCGCATGAGAAAACGATAGAGCATTTGACTGAGGTGCACAGT AGAGGCTTAGAACTCCACGCTACAGCTGAATCAAAGAATGCAGAACTTGAAGCGCAAATG CATGAAGCTCTTGAGACAATAGGGAAGAAAGATTCAGAAGTAAAAGACTTGAATGAGAGG CTGGCTGCTCTTGAGTCCGAGATTGAAAGTTTGACGCATGTGAATGAAGCCATGAAACAG GAAATCAATGCTAAGCTGGTCAAGGTTGATGAGCTGCAGGAGAAATTGAGTTCCATAAGT TCTGAGAAAGAAGAAGTTGCAGAGAAAGTGGTTGTTCATGAGAAAACAATAGAACATTTG AGAGAAGAGCACTCAAGGGGCTTGGAGCTCCAGTCTGCTGCTGAATCGAGATCTGCAGAA ATTGAGAATGAACTGCGTGAAGTTCTTGAAACAGTAGCTCAGAAAGAAGCTGAAGTTACA GACTTGAAGGAAAAGCTAGTTTCACTTGAAACTGAGAATGAAAAACTGGTTGGTATAAAT GAGGCCCTGAAAGGGGAACTGGATACTAAGGTGGCAATGTTCGATGAGTTACAGGAACAG TTCAGCTCAACTCATGCTGAAAAGGAAGAAGCTGCAGAGAAGCTAGCTGTTCATGAGAGA ACAATTTCGCACCTGACAGAAGTGCACACGAGAAGCTTGGAACTCCACTCTGCAGCTGAG TCAAAGAACGAAGAAATTGAAAGTAAGCTCCATGAGGCCCTTGAGATGGCAGCACAGAAA GAAGCTGAAGTTAAAGACCTAAGCAAGAAGCTGGATGCTCTTGAAATAGAGTTGGGATAT TATGAGGAGCAGGCAACTGAAGCTGCTGCTGCTGAAGAAACGCATAAGATTAAGTTTGAT GAAGCTGTGCACAAAATAAAAAGCCTAGAAGAACAACTTGCAGTAACAGAAAACAAGGTT GAGCTTTTCCATACCGAGAAAGAAAATTTGGTTATTGCAAATAGCAAATTGAATGAGGAG CTGGAGTTACATCAGAACAAGCTGAATGAATTGCAAGTAGCCCTTGCTGCAGCAGTAGCA GAAAAGGAGGGGTCATCTGAAGAGATTCATTCATTGAGGAAAACACTAGATGGCATGATT CAACGGAAGGAAGAGCTGGAAAGCCAGGTAATGAAGTTATTCATAATTTTGTTAGTAGTT TGTTATTGCTTCTTATCTCCTGTAGCTCTCTCTCAACAGTTATATTGCTATTACATATTT TGTAGCTTTAAGAAAGTTATCTCCCTTTCAGGTATCTTCTACTGTCGAAGAGCATGA