Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0614600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31176650:31182404:1 gene:Os04g0614600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aminotransferase, pyruvate-dependent GABA transaminase description:Similar to Viroid RNA-binding protein (Fragment). (Os04t0614600-01);Similar to OSIGBa0126B18.7 protein. (Os04t0614600-02)
Sequence	ATGGTGATTGCGCGCGGCCTTCTCCGATCGAATGCCTCTTCTTCCTCCTCTCAGGCAATC AACTTATTGAAGTATGTAACTAGCACTGGAAGTCTGCAAGGGCACACGCAAAATTTGTGT GATGCATCAACCAGACATTTCAGTTCAGTACCATCGCCCCAGTACAACTCAACTGAAGAG AATGGGTTCAAGGGGCATGGCATGTTGGCACCATTCACAGCTGGTTGGCAGAGCACCGAT GTTCATCCGTTAGTCATTGAAAGATCTGAGGGTTCGTATGTATATGATATCGACGGAAAG AAGTATCTAGATTCTCTTGCGGGACTATGGTGTACAGCTTTAGGTGGTAGTGAACCTCGA TTAGTCAAAGCTGCAACTGAGCAATTACACAAGTTGCCCTTCTATCACTCCTTTTGGAAC CGTACGACCAAACCATCTCTGGATCTTGCAAAGGAACTGCTTAGCATGTTCACTGCAAGG GAAATGGGAAAAGTGTTCTTCACAAATAGTGGTTCAGAAGCAAATGATTCTCAGGTAAAA CTGGTCTGGTATTATAACAATGCACTGGGAAGGCCAGACAAGAAGAAATTTATTGCACGA TCAAAATCATACCATGGATCAACACTAATATCAGCTAGTCTATCCGGTCTTCCTGCACTG CATCAGAAGTTTGATCTGCCTGCACCTTTTGTTCTGCACACGGACTGCCCTCACTACTGG CGCTTCCATCTTCCTGGTGAAACAGAAGAAGAATTTGCAACTAGACTTGCCAATAATTTA GAGGAACTTATCCTCAAAGAAGGACCAGAAACAATTGCTGCATTCATTGCAGAGCCTGTG ATGGGTGCTGGTGGTGTCATACCTCCTCCAAAGACCTATTTTGAAAAGGTCCAAGCGATC GTTAAGAAGTATGACATCCTTTTCATAGCAGATGAGGTCATTACTGCATTTGGAAGGTTG GGAACCATGTTTGGAAGTGATATGTATAACATCAAGCCAGATCTAGTCTCCATGGCCAAG GCGCTTTCATCTGCCTATGTGCCCATTGGAGCAATTATGGTTAGCCCAGAAATATCAGAT GTTATTCATTCTCAGAGCAATAAGCTCGGTTCATTTGCTCATGGATTTACATACTCTGGC CATCCAGTTGCATGTGCTGTCGCCATAGAAGCCCTGAAAATTTATCAGGAAAGGAACATT CCTGATCATGTGAAGCAAATTTCTCCAAGGTTCCAGGAGGGAGTCAAGGCCTTTGCAGGA AGTCCGATTGTTGGAGAGATACGTGGTGTAGGGTTGATACTTGGAACTGAATTCGCAGAC AACAAATCGCCAAATGATCCATTCCCTGCTGAATGGGGCGTCGGCGCGATCTTTGGAGCG GAGTGCCAGAAGCGCGGCATGCTGGTTAGAGTTGCTGGAGACAACATCATGATGTCACCA CCATTGATAATGACCCCTGATGAAGTCGAGGAGCTGGTGAGCATCTATGGAGATGCACTC AAGGCCACCGAGGAGAGGGTGGCTGAGCTGAAATCCAAGAAGAACAATTAG

Peptide Sequence

PEP ID	Os04t0614600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31176650:31182404:1 gene:Os04g0614600 transcript:Os04t0614600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aminotransferase, pyruvate-dependent GABA transaminase description:Similar to Viroid RNA-binding protein (Fragment). (Os04t0614600-01);Similar to OSIGBa0126B18.7 protein. (Os04t0614600-02)
Sequence	MVIARGLLRSNASSSSSQAINLLKYVTSTGSLQGHTQNLCDASTRHFSSVPSPQYNSTEE NGFKGHGMLAPFTAGWQSTDVHPLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPR LVKAATEQLHKLPFYHSFWNRTTKPSLDLAKELLSMFTAREMGKVFFTNSGSEANDSQVK LVWYYNNALGRPDKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYW RFHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKVQAI VKKYDILFIADEVITAFGRLGTMFGSDMYNIKPDLVSMAKALSSAYVPIGAIMVSPEISD VIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQERNIPDHVKQISPRFQEGVKAFAG SPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAIFGAECQKRGMLVRVAGDNIMMSP PLIMTPDEVEELVSIYGDALKATEERVAELKSKKNN

Transcript Sequence

Transcript ID	Os04t0614600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31176650:31182404:1 gene:Os04g0614600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aminotransferase, pyruvate-dependent GABA transaminase description:Similar to Viroid RNA-binding protein (Fragment). (Os04t0614600-01);Similar to OSIGBa0126B18.7 protein. (Os04t0614600-02)
Sequence	ACTCTGCACACGTCCCCATCTCCCCCGTCTCTCCTGCGTTCTCTTCGCCTACCTTACGAT AAACTTGGCCACGTCTCAATCTCTCTCTCTCGCGCTCTCCTCTCCTTCTATAATACTCGG CCTCCCCCTCGCTTCTCGCTCTGTTTCTCCGAGAATTAGGGGGGAGGTTGGAGCTGTGCA AGATGGTGATTGCGCGCGGCCTTCTCCGATCGAATGCCTCTTCTTCCTCCTCTCAGGCAA TCAACTTATTGAAGTATGTAACTAGCACTGGAAGTCTGCAAGGGCACACGCAAAATTTGT GTGATGCATCAACCAGACATTTCAGTTCAGTACCATCGCCCCAGTACAACTCAACTGAAG AGAATGGGTTCAAGGGGCATGGCATGTTGGCACCATTCACAGCTGGTTGGCAGAGCACCG ATGTTCATCCGTTAGTCATTGAAAGATCTGAGGGTTCGTATGTATATGATATCGACGGAA AGAAGTATCTAGATTCTCTTGCGGGACTATGGTGTACAGCTTTAGGTGGTAGTGAACCTC GATTAGTCAAAGCTGCAACTGAGCAATTACACAAGTTGCCCTTCTATCACTCCTTTTGGA ACCGTACGACCAAACCATCTCTGGATCTTGCAAAGGAACTGCTTAGCATGTTCACTGCAA GGGAAATGGGAAAAGTGTTCTTCACAAATAGTGGTTCAGAAGCAAATGATTCTCAGGTAA AACTGGTCTGGTATTATAACAATGCACTGGGAAGGCCAGACAAGAAGAAATTTATTGCAC GATCAAAATCATACCATGGATCAACACTAATATCAGCTAGTCTATCCGGTCTTCCTGCAC TGCATCAGAAGTTTGATCTGCCTGCACCTTTTGTTCTGCACACGGACTGCCCTCACTACT GGCGCTTCCATCTTCCTGGTGAAACAGAAGAAGAATTTGCAACTAGACTTGCCAATAATT TAGAGGAACTTATCCTCAAAGAAGGACCAGAAACAATTGCTGCATTCATTGCAGAGCCTG TGATGGGTGCTGGTGGTGTCATACCTCCTCCAAAGACCTATTTTGAAAAGGTCCAAGCGA TCGTTAAGAAGTATGACATCCTTTTCATAGCAGATGAGGTCATTACTGCATTTGGAAGGT TGGGAACCATGTTTGGAAGTGATATGTATAACATCAAGCCAGATCTAGTCTCCATGGCCA AGGCGCTTTCATCTGCCTATGTGCCCATTGGAGCAATTATGGTTAGCCCAGAAATATCAG ATGTTATTCATTCTCAGAGCAATAAGCTCGGTTCATTTGCTCATGGATTTACATACTCTG GCCATCCAGTTGCATGTGCTGTCGCCATAGAAGCCCTGAAAATTTATCAGGAAAGGAACA TTCCTGATCATGTGAAGCAAATTTCTCCAAGGTTCCAGGAGGGAGTCAAGGCCTTTGCAG GAAGTCCGATTGTTGGAGAGATACGTGGTGTAGGGTTGATACTTGGAACTGAATTCGCAG ACAACAAATCGCCAAATGATCCATTCCCTGCTGAATGGGGCGTCGGCGCGATCTTTGGAG CGGAGTGCCAGAAGCGCGGCATGCTGGTTAGAGTTGCTGGAGACAACATCATGATGTCAC CACCATTGATAATGACCCCTGATGAAGTCGAGGAGCTGGTGAGCATCTATGGAGATGCAC TCAAGGCCACCGAGGAGAGGGTGGCTGAGCTGAAATCCAAGAAGAACAATTAGACCGAGT TGACAACTCCTCATCTTGCAACTGCACGAGACGACGATGACGATGATAATGCTGGCAGCG ATGATGATGATGGTGATGGTGTTCTTGGTGGATGTACAGAGTAATAATCCCTCGTCTGTC AGAAAACTCTACTCAGAGAACAGTAATAACGCTGTTCTTAGCGTGCAAAAAATAATCAAA ACAGCGATCATGCATTCACCCAGAACCGGTGAATCTTCACCAGATTTCAGTCTTACGCAC GGGATTAGCTGCCGTGGTGAACTGGTGGTGACTGTCATCTTGTAGACCAAATCAGGTTGG AATAAATCAAATTTACATGAAGTCGCATG