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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0612900-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:31076518:31077776:1 gene:Os04g0612900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar ATPase assembly integral membrane protein VMA21-like domain domain containing protein. (Os04t0612900-01)
Sequence

ATGTCAGGAGTATTAGCAAAATTCGCTATTGCATCTGCGGTGATGTGGACAGCTCCAGTT
GCCATCGTGTATGGATTTTACTACCAGATGATTCCAGGTGTGAGTCAACTGTCATCCTCG
ACGCAAACTCTAGCAAGTGGATTCCTTGCTGTTATATCGATTAATCTGGTAATCGGCTTT
TATATATGCATGGCGATGAAGGAGACTCCCCACCAAGAGCCACAACCTGATCCAACCTTC
TTGGCAAATGCTAAAGCAAGCATTGATCAACCAACTCCGTCTCAAGTGAATGATGATTCC
CATGGAAAGGGAAAGGTGGAGTAG

Peptide Sequence

PEP ID

Os04t0612900-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:31076518:31077776:1 gene:Os04g0612900 transcript:Os04t0612900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar ATPase assembly integral membrane protein VMA21-like domain domain containing protein. (Os04t0612900-01)
Sequence

MSGVLAKFAIASAVMWTAPVAIVYGFYYQMIPGVSQLSSSTQTLASGFLAVISINLVIGF
YICMAMKETPHQEPQPDPTFLANAKASIDQPTPSQVNDDSHGKGKVE

Transcript Sequence

Transcript ID

Os04t0612900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:31076518:31077776:1 gene:Os04g0612900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar ATPase assembly integral membrane protein VMA21-like domain domain containing protein. (Os04t0612900-01)
Sequence

TACTCGCGAAGCCAAAGCCTCCGCCGCGATCCCCTCCGCCGCTCCCACGAGCTTCGCCGC
CCGCTTCCGTCGCGCGTCGGCGATTCGCGCTCTCCCCGACTCCAGCGCCTTCGTCTTCTT
CGACCTCCTCCTCCGAAGGCCCCGCCGATCGATCCCCGGTGTCCGCGCCTTCTAGTTCGC
CTTTTCGAGCTCTTTTTCGCCGGAGACGACGGGCGTGGGCGATTCGGCTGGATTCCTCTC
CGCATTCCTGTTAGGACTTAGGAGAAGTAATGTCAGGAGTATTAGCAAAATTCGCTATTG
CATCTGCGGTGATGTGGACAGCTCCAGTTGCCATCGTGTATGGATTTTACTACCAGATGA
TTCCAGGTGTGAGTCAACTGTCATCCTCGACGCAAACTCTAGCAAGTGGATTCCTTGCTG
TTATATCGATTAATCTGGTAATCGGCTTTTATATATGCATGGCGATGAAGGAGACTCCCC
ACCAAGAGCCACAACCTGATCCAACCTTCTTGGCAAATGCTAAAGCAAGCATTGATCAAC
CAACTCCGTCTCAAGTGAATGATGATTCCCATGGAAAGGGAAAGGTGGAGTAGGTCATAT
CACAACATGTGCATGTTTCACATGTTATCCAGAAACAGTTCTTCTCGATACCCTGCCTTC
TAATTCAATATTATCTTCTGTAAATCTTGAGAATTATGGAACCAATATGAGTTTTACCTT
TTGTACTGTT