Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0612800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31073723:31076340:-1 gene:Os04g0612800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2217. (Os04t0612800-01)
Sequence	ATGCTACTCCGCGTCGGCCTCTCGCGCCGCCGCCTCACGACGGCGGCGCTGCCCCTCTCG ATCGCCGCGCGGGGGCGGCGGCTCTCGACGGGGCCTTCGCCGCCGCCGCCTCCGCCGGCG GCGGAGTGGACCGACACGGTGGACTACCTGGACGAGTCGGGGGAGGTCCTCTCGTCGGCG CCGGGGGCGCGCGCCGCGGTGCCGGGCGCCGACGCGACCATCCTGTCCGGCTCCTCGGCC CACCCGCTCCCGCGCCCCGCGGCGGCGGCGCGGCTGGCGGCGCTCGCGCTCCGCTTCCGC TCGGGGCCATCCCTCTCCGCCGCGCTCTCCGCGCTGCCGTCCCAGCCCGATCCGGCTCTC CTCCTCCTCGCCGCGTCCTCCCTCCCCGCCTCCGACCCCACCCCGCTCCTCGCCCTCGTC GCCTGGGCGCGCGTCCAGCCATGGTTCGTCCCCTCCGACGACCTCTCCTCCCTCCTCGCC GCCCGCCTCGCCCCGGCCACCCACTCCTCCGAACTCCTCTCCCTCTTCGACGATACCCTC GCCCTCCCCGACCCCGCCGCCTTCCCCAAGACCCTCAACGCCGTTCTCTCCGCGCTCGCC ACCCATGGCCTCCTCGAGCCCGCCTTCTTCTGCTTCAAGCGCCTCCGCGACGCGGGTTTC AGGGTCCTGGAGACGCACGCCTACAATGCCCTCCTCTCGCTGCTGCTCACCAGGGGCCTC GCCTTCAAGGCCTTTGAGGTGCTCGACGAAATGTCATCGTCGGGGTGCGCGCTCGACGAG GGAACCTACGAGCTCGTGGTGCCAGCCCTTGCGCGCGCCGGGAGGATAGATGCCGCACGC AAGATGTTTGATGAAATGAGGAAGAGGGAGGGGATTGGGCGGGCGTCGGCTGGGATGTAC GGCGTGCTGGTGGACGTGCTGGCAAAAGCAGGGAGGCTCGATGCTGCTATGGGGATGTAC AGGGAGATGGTGGCGGTGGGGCACCGTGCAAGCCCGGCGGTGAGCACAGCCGTGGTGGAG GGGCTGGTGAGGGCTGGGAAGTTGGATGCAGGGATGGAGCTCTGGGAGGAGATGAGGAGG GGAGGGCTCCGTCCAAGCTTTGGTCTGTACACCATGGTTGTCGAGGCGAATGCACGGTCC GGGAGGTTGGATGTTGCCACACAGTTGTTTGGTGATATGGAGAAGTCCGGCTTCTTCCCT ACGCCAGCGACATACGCTTGTCTGGTTGAGATGCATGCTTCTGCAGGGCAGGTGGATGCT GCTATGCGGTTGTACCACTCGATGGCAAATGCTGGACAACGGCCGGGGCTTAGCACATTT ACAGCATTGCTGATGATGTTGGCGAATAAGAGGATGCTGGATTTGGCTGCAAAGGTATTG CTGGAGATGAAGGCATCAGGGTTCCCGATAGAGGTGACCGCCAGCGACCTCCTGATGATT TACATCAAGGAAGGGTCGACGGAGCTTGCACTCCGGTGGCTTCGGTTCATGGGCTCCGCT GGCATAAGGACCAACAATTTCATCATAAGGCAGCTATTCGAGTCATGTATGAAGACGGGG CTGTATGACTCAGCACGGCCATTGCTCGAGACATATGTCGCGGGGGCAGCAAAGGTGGAC TTGATACTCTACACTTCGATCCTTGCACATTTGGTGCGGTGCCAGGATGAGGGACGCGAG CGGGCAATCATGGACATCCTGAGTGTAAGCAAGCACAAGGCACATGACTTCATGTGCGGG CTGTTCACCGGGCCTGAGCAGCGCAAGAAGCCAGTGCTCTCGTTCGTCCGGGAGTTCTTC CAGGGCATCGACTACGACAATGAGGAGAGTGCGGCAAGGTACTTCGTGAATGTGCTTCTC AACTATTTAGTTCTCATGGGGCAGATGAACCGTGCCCGCTGTATCTGGAAGGTCGCCTAC GAGAATAAGCTGTTTGCCAAGGCGATCGTCTTCGACCAGCACATCGCCTGGTCACTGGAC GTCAGAAACCTCTCCGTTGGCGCAGCGCTAGTGGCAACCGTGCACACGCTGCACCGGTTC AGGAAGCGTATGCTCTACTATGGGGTGGTGCCGCGCCGCATCAAGCTAGTGACTGGACCA ACGCTCAAGATGGTGGTGGCGCAGGTGCTGGCGTCGCTGGAGTCCCCCTTTGAGGTGAGC AAGGTGGTGCTGCGGGCGCCAGGTGACTCGGTGCTCGAGTGGTTCAAGAAGCCGATCGTG CAGCAGTTCCTGCTCAACGAGATACCATCCAAGGCTGACGTCCTGATGCACAGGCTCAAC GTGATGTTCCCAAGTTCGGCGCCGGAGGTCCGATCGCTCTCTATCCCCAGGTCCCTTAGT ATGTCAAGGTGA

Peptide Sequence

PEP ID	Os04t0612800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31073723:31076340:-1 gene:Os04g0612800 transcript:Os04t0612800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2217. (Os04t0612800-01)
Sequence	MLLRVGLSRRRLTTAALPLSIAARGRRLSTGPSPPPPPPAAEWTDTVDYLDESGEVLSSA PGARAAVPGADATILSGSSAHPLPRPAAAARLAALALRFRSGPSLSAALSALPSQPDPAL LLLAASSLPASDPTPLLALVAWARVQPWFVPSDDLSSLLAARLAPATHSSELLSLFDDTL ALPDPAAFPKTLNAVLSALATHGLLEPAFFCFKRLRDAGFRVLETHAYNALLSLLLTRGL AFKAFEVLDEMSSSGCALDEGTYELVVPALARAGRIDAARKMFDEMRKREGIGRASAGMY GVLVDVLAKAGRLDAAMGMYREMVAVGHRASPAVSTAVVEGLVRAGKLDAGMELWEEMRR GGLRPSFGLYTMVVEANARSGRLDVATQLFGDMEKSGFFPTPATYACLVEMHASAGQVDA AMRLYHSMANAGQRPGLSTFTALLMMLANKRMLDLAAKVLLEMKASGFPIEVTASDLLMI YIKEGSTELALRWLRFMGSAGIRTNNFIIRQLFESCMKTGLYDSARPLLETYVAGAAKVD LILYTSILAHLVRCQDEGRERAIMDILSVSKHKAHDFMCGLFTGPEQRKKPVLSFVREFF QGIDYDNEESAARYFVNVLLNYLVLMGQMNRARCIWKVAYENKLFAKAIVFDQHIAWSLD VRNLSVGAALVATVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKMVVAQVLASLESPFEVS KVVLRAPGDSVLEWFKKPIVQQFLLNEIPSKADVLMHRLNVMFPSSAPEVRSLSIPRSLS MSR

Transcript Sequence

Transcript ID	Os04t0612800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31073723:31076340:-1 gene:Os04g0612800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EMB2217. (Os04t0612800-01)
Sequence	GCGTCATCGCGATGCTACTCCGCGTCGGCCTCTCGCGCCGCCGCCTCACGACGGCGGCGC TGCCCCTCTCGATCGCCGCGCGGGGGCGGCGGCTCTCGACGGGGCCTTCGCCGCCGCCGC CTCCGCCGGCGGCGGAGTGGACCGACACGGTGGACTACCTGGACGAGTCGGGGGAGGTCC TCTCGTCGGCGCCGGGGGCGCGCGCCGCGGTGCCGGGCGCCGACGCGACCATCCTGTCCG GCTCCTCGGCCCACCCGCTCCCGCGCCCCGCGGCGGCGGCGCGGCTGGCGGCGCTCGCGC TCCGCTTCCGCTCGGGGCCATCCCTCTCCGCCGCGCTCTCCGCGCTGCCGTCCCAGCCCG ATCCGGCTCTCCTCCTCCTCGCCGCGTCCTCCCTCCCCGCCTCCGACCCCACCCCGCTCC TCGCCCTCGTCGCCTGGGCGCGCGTCCAGCCATGGTTCGTCCCCTCCGACGACCTCTCCT CCCTCCTCGCCGCCCGCCTCGCCCCGGCCACCCACTCCTCCGAACTCCTCTCCCTCTTCG ACGATACCCTCGCCCTCCCCGACCCCGCCGCCTTCCCCAAGACCCTCAACGCCGTTCTCT CCGCGCTCGCCACCCATGGCCTCCTCGAGCCCGCCTTCTTCTGCTTCAAGCGCCTCCGCG ACGCGGGTTTCAGGGTCCTGGAGACGCACGCCTACAATGCCCTCCTCTCGCTGCTGCTCA CCAGGGGCCTCGCCTTCAAGGCCTTTGAGGTGCTCGACGAAATGTCATCGTCGGGGTGCG CGCTCGACGAGGGAACCTACGAGCTCGTGGTGCCAGCCCTTGCGCGCGCCGGGAGGATAG ATGCCGCACGCAAGATGTTTGATGAAATGAGGAAGAGGGAGGGGATTGGGCGGGCGTCGG CTGGGATGTACGGCGTGCTGGTGGACGTGCTGGCAAAAGCAGGGAGGCTCGATGCTGCTA TGGGGATGTACAGGGAGATGGTGGCGGTGGGGCACCGTGCAAGCCCGGCGGTGAGCACAG CCGTGGTGGAGGGGCTGGTGAGGGCTGGGAAGTTGGATGCAGGGATGGAGCTCTGGGAGG AGATGAGGAGGGGAGGGCTCCGTCCAAGCTTTGGTCTGTACACCATGGTTGTCGAGGCGA ATGCACGGTCCGGGAGGTTGGATGTTGCCACACAGTTGTTTGGTGATATGGAGAAGTCCG GCTTCTTCCCTACGCCAGCGACATACGCTTGTCTGGTTGAGATGCATGCTTCTGCAGGGC AGGTGGATGCTGCTATGCGGTTGTACCACTCGATGGCAAATGCTGGACAACGGCCGGGGC TTAGCACATTTACAGCATTGCTGATGATGTTGGCGAATAAGAGGATGCTGGATTTGGCTG CAAAGGTATTGCTGGAGATGAAGGCATCAGGGTTCCCGATAGAGGTGACCGCCAGCGACC TCCTGATGATTTACATCAAGGAAGGGTCGACGGAGCTTGCACTCCGGTGGCTTCGGTTCA TGGGCTCCGCTGGCATAAGGACCAACAATTTCATCATAAGGCAGCTATTCGAGTCATGTA TGAAGACGGGGCTGTATGACTCAGCACGGCCATTGCTCGAGACATATGTCGCGGGGGCAG CAAAGGTGGACTTGATACTCTACACTTCGATCCTTGCACATTTGGTGCGGTGCCAGGATG AGGGACGCGAGCGGGCAATCATGGACATCCTGAGTGTAAGCAAGCACAAGGCACATGACT TCATGTGCGGGCTGTTCACCGGGCCTGAGCAGCGCAAGAAGCCAGTGCTCTCGTTCGTCC GGGAGTTCTTCCAGGGCATCGACTACGACAATGAGGAGAGTGCGGCAAGGTACTTCGTGA ATGTGCTTCTCAACTATTTAGTTCTCATGGGGCAGATGAACCGTGCCCGCTGTATCTGGA AGGTCGCCTACGAGAATAAGCTGTTTGCCAAGGCGATCGTCTTCGACCAGCACATCGCCT GGTCACTGGACGTCAGAAACCTCTCCGTTGGCGCAGCGCTAGTGGCAACCGTGCACACGC TGCACCGGTTCAGGAAGCGTATGCTCTACTATGGGGTGGTGCCGCGCCGCATCAAGCTAG TGACTGGACCAACGCTCAAGATGGTGGTGGCGCAGGTGCTGGCGTCGCTGGAGTCCCCCT TTGAGGTGAGCAAGGTGGTGCTGCGGGCGCCAGGTGACTCGGTGCTCGAGTGGTTCAAGA AGCCGATCGTGCAGCAGTTCCTGCTCAACGAGATACCATCCAAGGCTGACGTCCTGATGC ACAGGCTCAACGTGATGTTCCCAAGTTCGGCGCCGGAGGTCCGATCGCTCTCTATCCCCA GGTCCCTTAGTATGTCAAGGTGATGATGTCTATCTCTGTAGTACGTCGTTTTAGCTTCAT TCAAGCAGAATCCATATTGGCATATTGTATACTAGTATAACTTTTTTGTCCAACCATCAG AGTGAGAACGTTACCCTTGTCCCTGTGTACAAGTACAGTAATGCTTTATTGCAAAATGCA AATGGCTCGTTCTTGGATAGGAGTCAGTGACCCATTCCATTCCATTACACAATATACATG TGTGTTGCAACGCTATATTAAACACAGATTAGTACAAC