Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0611400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:31003855:31007535:1 gene:Os04g0611400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f). (Os04t0611400-01)
Sequence	ATGGCGAGGAGGCTCGCCGCCGCGCTGTGTCTCGCGGTGGCCGCGGTGAGCGTGGCCGTG GCGACGGCGAGGTTCGTGGTGGAGAAGAACAGCGTGAAGGTGCTGTCGCCGCGGTCGCTG CGGGGGCGGCACGAGGCGGCGATCGCCAACTACGGCGTGCCGGACTACGGCGGCACGCTC ACCGGCGTGGTGGTGTACCCGGCGGACGCGAGGCTGGCCGACGGGTGCAGGCCGTTCGGC GAGGCGGCGGCGAAGGCGCTCAGGTCGCGGTCGCGCCGCCCCGTCGTGCTCCTCGTCGAC CGCGGCGGCTGCTACTTCGCGCTCAAGACGTGGCACGCGCAGCTCGCCGGCGCGGCGGCC GTGCTGGTGGCGGACGGCGTCGACGAGCCGCTGCTCACGATGGACAGCCCCGAGGAGGAG ACCCCCGACATGGCGTTCCTCGCCAACATCACCGTCCCGTCGGCGCTCGTCACCAAGCAG TTCGGCGACGCCCTCCGCGCCGCCGCCTCCGCCGCCGACGACGAGGTGGTGGTGCGGCTG GACTGGCGCGAGTCGATGCCGCACCCCGACGAGCGCGTCGAGTACGAGCTCTGGACGAAC AGCAACGACGAGTGCGGGCCGCGGTGCGACGAGCAGGCGGCGTTCGTCGGCGCGTTCCGC GGCCACGCGCAGCTGCTGGAGAAGCGCGGCTACGCGCTGTTCACGCCGCACTACATCACC TGGTTCTGCCCCGACGCGTTCCTGGAGACGACGCAGTGCAAGGCGCAGTGCGTCAACCGC GGCCGCTACTGCGCCCCCGACCCCGACGGCGACCTCGCCGCCGGCTACTCCGGCCGCGAC GTCGTGCTCGAGAACCTCAGGCAGCTCTGCGTCCACCGCGTCGCCAACGCGCGCAACGCC TCCTGGCTCTGGTGGGACTACGTCGCCGACTACCACCTCCGCTGCTCCATGAAGGGCGAC CACTACACCCGCCGCTGCGCCGACGACGTCGCCAAGTCGCTCGGTTTGCCGATGGATTTG ATCGACGAGTGCATGGGGGATCCCGACGCCGACGTCGAGAACGACGTGCTCAAGACGGAG CAGATTGTTCAGGTTGGACATGGCACCAGAGGGGATGTGACGATCTTGCCGACGCTGGTG ATCAACAATGTGCAGTACCGGGGCAAATTGGAGAGCACTTCGGTTCTCAAGGCGATTTGT GCTGGATTCAAGGAGTCCACTGAGCCTGATGTCTGCCTGACACCAGAAATGGAGACTGAC GAGTGCCTGAACAACAATGGCGGCTGCTGGCGAGACGAGAAGACCAACATCACTGCCTGC AAGGACACTTTCAGGGGAAGAATTTGCCAGTGCCCTGTAGTTGATGGTGTTCAGTACCAA GGAGACGGCTACACCCACTGCAAAGCGGTCGGACCAGGGCGGTGCGCGATGAACAACGGT GGCTGCTGGAAGGGGACGAGAGACGGCAAGACGTTCTCTGCTTGCTCGGATTCAGACTTG AGTGGGTGCAAGTGCCCACCTGGGTTCAAGGGCGACGGGCTCCATTGCGAAGACGTCGAC GAGTGCAGCGAGAAGCTGGCGTGCTCCTGCCCTCACTGCTCCTGCAAGAACACATGGGGT TCGTTCGACTGCAGCTGCCATGGCAACAACCTGATGTACATCAAAGCTGAAGATACCTGC ATTGCGAAGAACATGTCGGCGTTTGGGTGGCTGGTGACGACGCTGGTGCTGTCCTGCCTC GCCGGCGCCGGCGTCGCCGGATACGTGTTCTACAAGTACAGGCTCAGGAGGTACATGGAT TCAGAGGTGATGGCGATCATGTCGCAGTACATGCCTCTCGAGGGCCAGAACGGCGAGAGG CTGCCGCTGAGAGAGGAGGCCCAGGTTGAGCATGCTTAG

Peptide Sequence

PEP ID	Os04t0611400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:31003855:31007535:1 gene:Os04g0611400 transcript:Os04t0611400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f). (Os04t0611400-01)
Sequence	MARRLAAALCLAVAAVSVAVATARFVVEKNSVKVLSPRSLRGRHEAAIANYGVPDYGGTL TGVVVYPADARLADGCRPFGEAAAKALRSRSRRPVVLLVDRGGCYFALKTWHAQLAGAAA VLVADGVDEPLLTMDSPEEETPDMAFLANITVPSALVTKQFGDALRAAASAADDEVVVRL DWRESMPHPDERVEYELWTNSNDECGPRCDEQAAFVGAFRGHAQLLEKRGYALFTPHYIT WFCPDAFLETTQCKAQCVNRGRYCAPDPDGDLAAGYSGRDVVLENLRQLCVHRVANARNA SWLWWDYVADYHLRCSMKGDHYTRRCADDVAKSLGLPMDLIDECMGDPDADVENDVLKTE QIVQVGHGTRGDVTILPTLVINNVQYRGKLESTSVLKAICAGFKESTEPDVCLTPEMETD ECLNNNGGCWRDEKTNITACKDTFRGRICQCPVVDGVQYQGDGYTHCKAVGPGRCAMNNG GCWKGTRDGKTFSACSDSDLSGCKCPPGFKGDGLHCEDVDECSEKLACSCPHCSCKNTWG SFDCSCHGNNLMYIKAEDTCIAKNMSAFGWLVTTLVLSCLAGAGVAGYVFYKYRLRRYMD SEVMAIMSQYMPLEGQNGERLPLREEAQVEHA

Transcript Sequence

Transcript ID	Os04t0611400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:31003855:31007535:1 gene:Os04g0611400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 7 precursor (AtVSR7) (Epidermal growth factor receptor-like protein 3) (AtELP3) (BP80-like protein f) (AtBP80f). (Os04t0611400-01)
Sequence	AGGTCGCAGAGGAGGAGAGAGAGAGAAGGAGATCAAGAAGCACGGCAATGGCGAGGAGGC TCGCCGCCGCGCTGTGTCTCGCGGTGGCCGCGGTGAGCGTGGCCGTGGCGACGGCGAGGT TCGTGGTGGAGAAGAACAGCGTGAAGGTGCTGTCGCCGCGGTCGCTGCGGGGGCGGCACG AGGCGGCGATCGCCAACTACGGCGTGCCGGACTACGGCGGCACGCTCACCGGCGTGGTGG TGTACCCGGCGGACGCGAGGCTGGCCGACGGGTGCAGGCCGTTCGGCGAGGCGGCGGCGA AGGCGCTCAGGTCGCGGTCGCGCCGCCCCGTCGTGCTCCTCGTCGACCGCGGCGGCTGCT ACTTCGCGCTCAAGACGTGGCACGCGCAGCTCGCCGGCGCGGCGGCCGTGCTGGTGGCGG ACGGCGTCGACGAGCCGCTGCTCACGATGGACAGCCCCGAGGAGGAGACCCCCGACATGG CGTTCCTCGCCAACATCACCGTCCCGTCGGCGCTCGTCACCAAGCAGTTCGGCGACGCCC TCCGCGCCGCCGCCTCCGCCGCCGACGACGAGGTGGTGGTGCGGCTGGACTGGCGCGAGT CGATGCCGCACCCCGACGAGCGCGTCGAGTACGAGCTCTGGACGAACAGCAACGACGAGT GCGGGCCGCGGTGCGACGAGCAGGCGGCGTTCGTCGGCGCGTTCCGCGGCCACGCGCAGC TGCTGGAGAAGCGCGGCTACGCGCTGTTCACGCCGCACTACATCACCTGGTTCTGCCCCG ACGCGTTCCTGGAGACGACGCAGTGCAAGGCGCAGTGCGTCAACCGCGGCCGCTACTGCG CCCCCGACCCCGACGGCGACCTCGCCGCCGGCTACTCCGGCCGCGACGTCGTGCTCGAGA ACCTCAGGCAGCTCTGCGTCCACCGCGTCGCCAACGCGCGCAACGCCTCCTGGCTCTGGT GGGACTACGTCGCCGACTACCACCTCCGCTGCTCCATGAAGGGCGACCACTACACCCGCC GCTGCGCCGACGACGTCGCCAAGTCGCTCGGTTTGCCGATGGATTTGATCGACGAGTGCA TGGGGGATCCCGACGCCGACGTCGAGAACGACGTGCTCAAGACGGAGCAGATTGTTCAGG TTGGACATGGCACCAGAGGGGATGTGACGATCTTGCCGACGCTGGTGATCAACAATGTGC AGTACCGGGGCAAATTGGAGAGCACTTCGGTTCTCAAGGCGATTTGTGCTGGATTCAAGG AGTCCACTGAGCCTGATGTCTGCCTGACACCAGAAATGGAGACTGACGAGTGCCTGAACA ACAATGGCGGCTGCTGGCGAGACGAGAAGACCAACATCACTGCCTGCAAGGACACTTTCA GGGGAAGAATTTGCCAGTGCCCTGTAGTTGATGGTGTTCAGTACCAAGGAGACGGCTACA CCCACTGCAAAGCGGTCGGACCAGGGCGGTGCGCGATGAACAACGGTGGCTGCTGGAAGG GGACGAGAGACGGCAAGACGTTCTCTGCTTGCTCGGATTCAGACTTGAGTGGGTGCAAGT GCCCACCTGGGTTCAAGGGCGACGGGCTCCATTGCGAAGACGTCGACGAGTGCAGCGAGA AGCTGGCGTGCTCCTGCCCTCACTGCTCCTGCAAGAACACATGGGGTTCGTTCGACTGCA GCTGCCATGGCAACAACCTGATGTACATCAAAGCTGAAGATACCTGCATTGCGAAGAACA TGTCGGCGTTTGGGTGGCTGGTGACGACGCTGGTGCTGTCCTGCCTCGCCGGCGCCGGCG TCGCCGGATACGTGTTCTACAAGTACAGGCTCAGGAGGTACATGGATTCAGAGGTGATGG CGATCATGTCGCAGTACATGCCTCTCGAGGGCCAGAACGGCGAGAGGCTGCCGCTGAGAG AGGAGGCCCAGGTTGAGCATGCTTAGCTAGGCAGTTGCAGAGGTTGAACATTTTGGCAAT GTCCATTCGTTTTGAGACGCCAAGACACATGACAGCGACGAATGCCGCGATGTACATGGC GAAGTTCAGACATCATACTTGATGACAGGGGTTCTTGCAGTTTCTGCTTGGTGCTTTTGT AGAGAACTGAACCAGATAGGTTCAGAGTTTCTGGTAGAAGAACGGGATAAGTCTATGTCA AGCCGGTGCACCGCAAAGTGCAGACTAGACAAGTATAGCTGCTGTAATGCAGATTTGTTA GAATATATTGTGAATAATAGATCAACAATCTTCCT