Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0610900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:30974167:30979824:1 gene:Os04g0610900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CONSTITUTIVE TRIPLE-RESPONSE3 description:Similar to EDR1. (Os04t0610900-01)
Sequence	ATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGCCGCCGCCGCCGGCTGCT GCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACACGCGGCTGCCGCTGCTC GCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGGCGTCCGCGGAGTGGAGC GCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCGCCACCACCGCCACGACG GCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGGCGGCGACCGCCGGAGGA GGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACTACCTCCAGCTCTCCCTC GCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGCCCGAGCTCCTCATCGGC TGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGGCCGATGCCGCCGCTGTC TCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACAAGATCGCGCACGGGTTC TACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCAACGCTGCGGCGGAGGAC GGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACAGCGGCGAGTCGTCGGTG CTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCGCCGACCTCGAGCGCCGG GCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCGTCCGCCACCTCGCCGTC CTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACGGGGACCTGTTCATGCGG TGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCGTCGTCGTCCCCATCGGC AGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCAAGAGCCTCGCCGACTTC ATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCTCCGCGCCGCACCGCTCG TCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGGAGTACGTCGTCGACCTC GTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCAATGGCCAGTTGCTCTCC TCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTGCAAACTATGCAACACCG GCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACTCGATACTGTCAAATCCT CAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCTCTGTTCAGGTAGCCACC AAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACGGCAACTGCAACAAGAAC AGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGGAGATCAGTTCTGAGAGT GGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGCTGAGCATCGAGCCGTCT TTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGCTAAAGGAACGCGTAGGC GCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCTCTGATGTTGCAGTGAAG GTGCTTACTGACCAGGATGTCGGCGAAGCTCAACTGAAAGAATTCCTTAGAGAGATTGCA ATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGGGTGCAGTGACAAAATGC CCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCCTCTTCCGTCTCATCAAC AAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGCGCATGGCGTTAGATGTT GCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTGTACATTGGGATTTGAAA ACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTAGGTGACTTTGGCTTGTCC AGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTGGAACACCAGAATGGATG GCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCGACGTGTACAGCTTTGGA GTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATGGCCTAAGCCCTGCACAA GTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTCCACAAGAGACAGTCCCT GAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAAGGCAGCGACCGTCGTTT TCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGCTTGGTGGCTCATGA

Peptide Sequence

PEP ID	Os04t0610900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:30974167:30979824:1 gene:Os04g0610900 transcript:Os04t0610900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CONSTITUTIVE TRIPLE-RESPONSE3 description:Similar to EDR1. (Os04t0610900-01)
Sequence	MPHRRRLLNPAPSLPPPPAAAPAGFHHHLLAVDDTRLPLLADYALLQGDAAAAPASAEWS AGSGFTGISTDPATATTATTASTATAPGSASNLTAATAGGGGRETWVRRAREGYYLQLSL AIRLTSEAFLAGVPPELLIGCGGGGEAENHADVAADAAAVSYRLWVNGCLSWGDKIAHGF YNILGVDPHVWAMCNAAAEDGRRLPTLVALRAVDSGESSVLEVVLVDKCGDPALADLERR ALDLYRAAGVSLDLVRHLAVLVSDHMGGALRSEDGDLFMRWKAVSKQLRKRHRCVVVPIG SLSIGFCRHRAILFKSLADFIGLPCRIAQGCKYCSAPHRSSCLVKIDNERRFVREYVVDL VVEPGRLSSPDSSINGQLLSSVPSPFKTSCTMSSANYATPAASWNRAISGDRRNSILSNP QYSVAKYCVAEEKSSVQVATKEAMLPKCGQITQNGNCNKNSMAVFEVSKQMKAMEISSES GDKDNISSATPLKRLSIEPSFCADWLEISWDEIELKERVGAGSFGTVYRADWHGSDVAVK VLTDQDVGEAQLKEFLREIAIMKRVRHPNVVLFMGAVTKCPHLSIVTEYLPRGSLFRLIN KASAGEMLDLRRRLRMALDVAKGINYLHCLNPPIVHWDLKTPNMLVDKNWSVKVGDFGLS RFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKCDVYSFGVILWELMTMQQPWNGLSPAQ VVGAVAFQNRRLPIPQETVPELAALVESCWDDDPRQRPSFSSIVDTLKKLLKSMLGGS

Transcript Sequence

Transcript ID	Os04t0610900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30974167:30979824:1 gene:Os04g0610900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CONSTITUTIVE TRIPLE-RESPONSE3 description:Similar to EDR1. (Os04t0610900-01)
Sequence	ATGGCCGCCTCCTCCTCCATTTCCATTTGCATCACCACCTCCTCCTCCTCTTCTCCGAAC CCTAATTCCGACGAGCGGTGGTGGTGCTAGCGAGCGAGCTTGATCTCCATGCGTCGGCGC TAGCTCCACCGGCGGCCATGCCTCACCGACGACGCCTGCTTAACCCGGCGCCGTCACTGC CGCCGCCGCCGGCTGCTGCTCCGGCCGGCTTCCACCACCACCTCCTCGCCGTCGACGACA CGCGGCTGCCGCTGCTCGCCGACTACGCGCTGCTGCAGGGCGACGCCGCGGCGGCGCCGG CGTCCGCGGAGTGGAGCGCCGGGAGCGGGTTCACCGGCATCTCCACCGACCCGGCCACCG CCACCACCGCCACGACGGCGTCCACCGCCACGGCGCCGGGATCGGCGTCGAACCTGACGG CGGCGACCGCCGGAGGAGGAGGGAGGGAGACGTGGGTCCGCCGCGCCAGGGAGGGCTACT ACCTCCAGCTCTCCCTCGCCATCCGCCTAACCTCCGAGGCCTTCCTCGCCGGCGTCCCGC CCGAGCTCCTCATCGGCTGCGGCGGCGGCGGCGAAGCCGAGAACCACGCCGACGTCGCGG CCGATGCCGCCGCTGTCTCCTACCGGCTCTGGGTGAACGGGTGCTTGTCGTGGGGGGACA AGATCGCGCACGGGTTCTACAACATCCTGGGGGTGGACCCGCACGTGTGGGCGATGTGCA ACGCTGCGGCGGAGGACGGCCGGCGGCTGCCGACGCTGGTGGCGCTCCGGGCGGTGGACA GCGGCGAGTCGTCGGTGCTGGAGGTGGTGCTCGTCGACAAGTGCGGCGACCCAGCGCTCG CCGACCTCGAGCGCCGGGCCCTCGACCTCTACCGCGCCGCCGGCGTCTCCCTCGACCTCG TCCGCCACCTCGCCGTCCTCGTCTCCGACCACATGGGGGGCGCGTTGCGGTCGGAGGACG GGGACCTGTTCATGCGGTGGAAGGCGGTGAGCAAGCAGCTGAGGAAGCGGCACAGGTGCG TCGTCGTCCCCATCGGCAGCCTCTCCATCGGCTTCTGCCGCCACCGCGCCATCCTCTTCA AGAGCCTCGCCGACTTCATCGGCCTTCCCTGCCGGATCGCGCAGGGCTGCAAGTACTGCT CCGCGCCGCACCGCTCGTCCTGCCTCGTCAAGATCGACAACGAGAGAAGGTTTGTAAGGG AGTACGTCGTCGACCTCGTCGTTGAGCCGGGAAGACTCAGCAGTCCAGACTCGTCTATCA ATGGCCAGTTGCTCTCCTCCGTGCCTTCACCTTTCAAGACCTCATGTACAATGAGTTCTG CAAACTATGCAACACCGGCTGCTTCGTGGAATCGCGCGATATCTGGAGATCGTCGCAACT CGATACTGTCAAATCCTCAGTATTCAGTTGCTAAGTACTGTGTTGCCGAGGAGAAGAGCT CTGTTCAGGTAGCCACCAAAGAAGCCATGCTGCCAAAATGCGGTCAGATCACGCAGAACG GCAACTGCAACAAGAACAGTATGGCAGTGTTCGAAGTGTCGAAGCAGATGAAGGCGATGG AGATCAGTTCTGAGAGTGGCGATAAGGACAACATCTCCAGTGCTACGCCTCTGAAACGGC TGAGCATCGAGCCGTCTTTCTGCGCCGATTGGCTCGAGATTTCATGGGACGAGATCGAGC TAAAGGAACGCGTAGGCGCCGGTTCGTTTGGAACTGTGTATCGTGCTGACTGGCACGGCT CTGATGTTGCAGTGAAGGTGCTTACTGACCAGGATGTCGGCGAAGCTCAACTGAAAGAAT TCCTTAGAGAGATTGCAATCATGAAGCGTGTTCGCCATCCGAATGTGGTGTTATTCATGG GTGCAGTGACAAAATGCCCACATTTGTCGATAGTAACAGAGTATCTGCCCAGAGGGAGCC TCTTCCGTCTCATCAACAAGGCATCTGCTGGAGAAATGCTCGATTTAAGGCGTCGTTTGC GCATGGCGTTAGATGTTGCGAAAGGCATCAACTATCTCCATTGCCTGAATCCTCCAATTG TACATTGGGATTTGAAAACGCCAAACATGCTGGTGGACAAGAACTGGTCCGTGAAGGTAG GTGACTTTGGCTTGTCCAGATTTAAGGCGAATACCTTCATATCCTCCAAATCAGTTGCTG GAACACCAGAATGGATGGCACCAGAATTTCTTCGTGGCGAGCCATCAAACGAAAAGTGCG ACGTGTACAGCTTTGGAGTGATCTTATGGGAGCTCATGACAATGCAGCAACCATGGAATG GCCTAAGCCCTGCACAAGTAGTAGGAGCAGTTGCATTCCAGAACAGAAGGCTCCCAATTC CACAAGAGACAGTCCCTGAGCTAGCTGCTCTTGTTGAATCCTGCTGGGATGATGATCCAA GGCAGCGACCGTCGTTTTCGAGCATCGTGGACACGCTGAAGAAGTTGCTCAAATCGATGC TTGGTGGCTCATGACGAATACTGAAGACTGTTGGTCGCCTTCTTATTTTTGTTCTCCCTG TTAATGTTAATCTACAGCAAACAATAAGTTGGTAAGTCAGTTGCCTTAAAGGCATCTGAG TTCTCTACAGAAAGGAGAGGATAGTTGAAGCAGCACAAGTCCAATGCTGCATCGAGTTCG TTAGGTCACCTTTTTTTTTTCCTCCGTTTTCCGCATGAGAAACTAATATCTAAAAAATAT TGTTTTTTGCTCCTCTTTTTCTCTGGATTGAATTTTGTACAGTGCATACAAATTTGAAAT TAATGTGCAGAATTCAGATGGTCATG