Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0610700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:30952501:30957612:-1 gene:Os04g0610700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 15 description:Similar to Potassium transporter 13 (AtPOT13) (AtKT5). (Os04t0610700-01);Similar to OSIGBa0152L12.8 protein. (Os04t0610700-02)
Sequence	ATGGCCGCGTCGTCGTCGTCGTCGGCGTCGGCGTCGGCGATGGGCGGCGGGGGGATGCGG AAGGCGCCGTCGATGGAGTGGCGGTGGGTATCCACGGAGGAGGACGACGAGGGGGAGGAG GACGGGGACACGGTGGAGGCGGCGGCCGCGGCCGTCGGGGCCGTGGGCAGGGGCGGGAGC TTCGGGTCCGAGGAGGAGGAGGACGAGGAGGACGGCGGCGGCGGCGGCGAGGGGGAGGGG GAGGGCGAGGATGGGGAGAAGCAGAAGCTGATCCGCACCGTGCCGTCCGTCGACTGGTTC GACGTCGAGGGCTACGAGGTCTCCGTCGCGCAGCACATCGAGGACAGCGAGGAGTTTGAT TTTGGCAGGACAATGTTTCTTGCCCTTCAGACTCTTGCTGTGGTGTTTGGAGATATTGGA ATAAGTCCATTGTATACATTTGATGTCATGTTCAGCAAGTATCCCATTCTTGGAGAGGAG GATGTTCTTGGAGCACTGTCACTTGTCCTTTATACTCTAATTTCGATGCCACTAGTGAAG TATGTCTTAGTCGTCCTTTGGGCTAATGATGATGGTGAAGGTGGTATATTTGCGTTGTAC TCTTTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAG AGGATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGATCCATAAAAGTA AAGGAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTT GGGACTGCAATGTTCATATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCT GTCAGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGCCTTGTGGTGATGATTTCA GTTGTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTT GCACTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAAT CTCAGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTAT TTTGGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACA GGGTCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATG TTTGCGCTTCTTGTTCTTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTTTTCTT ATTGCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTC TGGCCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACA GCTATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATC ATTCATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTA TTGTTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCA TATGCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATG CTTCTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCC TTAGAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTG ATAATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTG AAGTATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCC AACCTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGA GTTCCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTT TTTGTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTC CAACGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAA GATAAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAG TTCATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGAC GAGGAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTT GACGTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGC TCAACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCA TTCATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAA GCCAGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTG AGGAACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAG GTGCGCTTGACCTCTTATGTTTGA

Peptide Sequence

PEP ID	Os04t0610700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:30952501:30957612:-1 gene:Os04g0610700 transcript:Os04t0610700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 15 description:Similar to Potassium transporter 13 (AtPOT13) (AtKT5). (Os04t0610700-01);Similar to OSIGBa0152L12.8 protein. (Os04t0610700-02)
Sequence	MAASSSSSASASAMGGGGMRKAPSMEWRWVSTEEDDEGEEDGDTVEAAAAAVGAVGRGGS FGSEEEEDEEDGGGGGEGEGEGEDGEKQKLIRTVPSVDWFDVEGYEVSVAQHIEDSEEFD FGRTMFLALQTLAVVFGDIGISPLYTFDVMFSKYPILGEEDVLGALSLVLYTLISMPLVK YVLVVLWANDDGEGGIFALYSLICRNAKVSLIPNQVHSEKRMSSFRLKLPTPELERSIKV KEKLESSLLLKKLLLGLVLFGTAMFISNGVITPAMSVLSAVSGLKVGIPNASQGLVVMIS VVLLVILYSVQRYATSKMGFALGPSLLIWFCCLGGIGIYNLSTYGPAAFKAFNPLYIIYY FGRNPFQAWLSLAGCLLCATGSEAIFANLSYFPVRYVQSMFALLVLPCLVLAYLGQGAFL IANQNSSEQIFFSSIPSGVFWPVFLIANLAALIASRTMTTAIFQCLKQSIALGCFPRLKI IHTSRKFMAKIYIPVVNWFLLFSCLGFILLFRSIYDVGNAYAIAELGVMIMATVYVTIIM LLIWETSIVKVLSFVITFLSLELVFFSSSLSSVGDGGWALIIFASGILMVMFIWNYGSKL KYDSEVKKKLSKDLMRKLGPNLGTIRAPGLGLVYSEIVKGVPAIFGHFLIALPAIHSIIV FVCIRNVPVPVVPQTERFLFQRVCTRGYHMFRCIARYGYKDKNQESQSTFERLLIEGLEK FIQREAVELSLQSGDDIDSDEEPPTPSRTIVAPNGSLYSLDVPLLADFVPSAEVIPEASC STPQHDPVVDYTQNLELELAFIRQAKQSGAVYLIDNPIVKARKNSWFFKKLIINYFFAFL RNNCRRAMMSMSIPHTNVMQVRLTSYV

Transcript Sequence

Transcript ID	Os04t0610700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30952501:30957612:-1 gene:Os04g0610700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 15 description:Similar to Potassium transporter 13 (AtPOT13) (AtKT5). (Os04t0610700-01);Similar to OSIGBa0152L12.8 protein. (Os04t0610700-02)
Sequence	GGTTTTGTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGATCTCTCC TCCTCCTCCTCCTCCATCCGCGCCTCCACATCTCCACACGCAACACACGGAGACGAATTT TTCTCCTGGTCCCTTCTCGCCTCGCCTCGCCTCGCCTCTCGATCCGATCGGGATACTATG GCCGCGTCGTCGTCGTCGTCGGCGTCGGCGTCGGCGATGGGCGGCGGGGGGATGCGGAAG GCGCCGTCGATGGAGTGGCGGTGGGTATCCACGGAGGAGGACGACGAGGGGGAGGAGGAC GGGGACACGGTGGAGGCGGCGGCCGCGGCCGTCGGGGCCGTGGGCAGGGGCGGGAGCTTC GGGTCCGAGGAGGAGGAGGACGAGGAGGACGGCGGCGGCGGCGGCGAGGGGGAGGGGGAG GGCGAGGATGGGGAGAAGCAGAAGCTGATCCGCACCGTGCCGTCCGTCGACTGGTTCGAC GTCGAGGGCTACGAGGTCTCCGTCGCGCAGCACATCGAGGACAGCGAGGAGTTTGATTTT GGCAGGACAATGTTTCTTGCCCTTCAGACTCTTGCTGTGGTGTTTGGAGATATTGGAATA AGTCCATTGTATACATTTGATGTCATGTTCAGCAAGTATCCCATTCTTGGAGAGGAGGAT GTTCTTGGAGCACTGTCACTTGTCCTTTATACTCTAATTTCGATGCCACTAGTGAAGTAT GTCTTAGTCGTCCTTTGGGCTAATGATGATGGTGAAGGTGGTATATTTGCGTTGTACTCT TTGATTTGCAGAAATGCAAAAGTGAGTCTCATTCCAAACCAAGTACACTCTGAGAAGAGG ATGTCGAGTTTCCGACTCAAGCTTCCAACGCCAGAGCTTGAGAGATCCATAAAAGTAAAG GAGAAGCTTGAATCTTCATTGCTATTGAAGAAGTTGCTTCTAGGTCTAGTGCTATTTGGG ACTGCAATGTTCATATCAAATGGAGTTATCACACCAGCTATGTCAGTGCTGTCTGCTGTC AGTGGCTTGAAAGTTGGGATACCAAATGCCTCACAAGGCCTTGTGGTGATGATTTCAGTT GTACTTCTTGTAATCTTGTATAGTGTACAGAGGTATGCCACTAGCAAAATGGGGTTTGCA CTTGGCCCTTCTTTACTTATATGGTTTTGCTGTCTCGGAGGAATTGGTATATACAATCTC AGTACATATGGCCCAGCAGCTTTTAAAGCATTTAATCCTCTCTACATTATTTATTATTTT GGGAGGAATCCCTTTCAGGCTTGGCTGTCCCTTGCTGGCTGTCTTTTATGTGCAACAGGG TCCGAGGCAATCTTTGCAAATCTTTCCTACTTTCCTGTAAGATATGTTCAGTCAATGTTT GCGCTTCTTGTTCTTCCTTGCCTTGTCTTGGCCTATTTAGGACAAGGCGCTTTTCTTATT GCAAACCAAAATTCATCTGAGCAGATCTTCTTCTCATCCATCCCAAGTGGAGTTTTCTGG CCTGTTTTCTTAATAGCCAATTTAGCCGCATTGATTGCTAGTAGAACAATGACGACAGCT ATATTCCAATGCCTAAAGCAGTCAATAGCTCTTGGTTGCTTTCCTCGACTCAAGATCATT CATACGTCTCGGAAATTTATGGCTAAGATATACATTCCTGTCGTGAACTGGTTTTTATTG TTTTCCTGCTTGGGCTTTATTCTGCTGTTCAGAAGCATATATGATGTTGGCAATGCATAT GCCATAGCTGAGCTTGGGGTGATGATAATGGCCACAGTCTATGTTACAATCATAATGCTT CTAATTTGGGAAACCAGTATTGTGAAAGTGTTGTCATTTGTCATCACATTCCTCTCCTTA GAGTTGGTTTTCTTCTCATCGTCTCTAAGTAGTGTTGGAGATGGAGGTTGGGCTCTGATA ATTTTTGCATCTGGTATTCTAATGGTTATGTTCATCTGGAATTATGGAAGCAAACTGAAG TATGACAGTGAAGTTAAAAAGAAGCTTTCAAAGGATTTGATGAGAAAATTGGGGCCCAAC CTTGGTACTATTAGAGCTCCTGGATTAGGCTTGGTCTACAGTGAGATAGTGAAAGGAGTT CCGGCAATTTTTGGTCATTTTCTGATTGCCCTTCCTGCAATCCACTCGATAATCGTTTTT GTATGCATCAGGAATGTACCAGTGCCCGTGGTTCCCCAGACTGAAAGGTTTCTTTTCCAA CGTGTTTGTACAAGGGGTTATCACATGTTCCGCTGTATTGCAAGGTACGGCTACAAAGAT AAGAACCAGGAGAGCCAAAGCACATTTGAGCGCCTTCTGATTGAAGGCCTCGAGAAGTTC ATACAGCGGGAGGCAGTAGAGCTATCCCTACAAAGTGGAGACGACATCGACTCTGACGAG GAGCCTCCAACCCCATCTAGGACAATCGTAGCGCCAAATGGTAGCCTCTACTCGCTTGAC GTCCCTCTCCTGGCAGACTTTGTGCCTTCGGCAGAAGTTATTCCTGAGGCCAGTTGCTCA ACGCCTCAGCACGATCCTGTGGTGGATTACACACAGAACCTTGAGCTGGAGCTCGCATTC ATCAGGCAGGCCAAGCAATCTGGAGCCGTCTATCTCATTGACAACCCCATCGTCAAAGCC AGGAAGAATTCCTGGTTCTTCAAGAAGCTGATCATAAACTACTTCTTCGCATTCTTGAGG AACAACTGCCGCAGGGCGATGATGTCGATGAGCATTCCACACACAAATGTGATGCAGGTG CGCTTGACCTCTTATGTTTGATTGCCGAATGGTACCCTTTCCGACACCCTTTTGTTTTGT TCGTTGCTATCAAGTAGAGATAACACTAACTAGAGAAGAATGGCATTGCAAAGAGAAGAA GAGTATAGTTGCACCTCTAGCATTATTCAGGAAGGGATAACATCTGTTTTAGGAATCCAC GTCTCCTGTAATTTTTGTACAATTGCGAAATGTATCTGCAAGCAAATGTTGTGTAGCAAA CACATCAGAGTGTGGTGAGCTAACATGTGTATTCCTGTGTGAGGAAGAGATTCTTTTGCC ATGTACTAGACAAGGTACTCGTTTTGAGTTTTTGAGTAAAAATTTTGATATCTACAAGTG TTAACAAC