Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0607500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:30724691:30726976:-1 gene:Os04g0607500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 4 description:Ion transporter , Na+ transport (Os04t0607500-01);Similar to Cation transporter HKT4. (Os04t0607500-02)
Sequence	ATGCATCCACCAAGTTTAGTGCTAGATACCTTGAAGCGTATCAAACTATACATAGCCATG AAGCTCCTGTTACCGAATTCGGAGGTGCCTCGGATCTATTGGGAGAAAGCTCAGCATCTC TGTGGGTTCCTGTCCATGAAGCTCATTTCCAGAGCCAGATGTGTGGCAAGTTCTGTCAAA CAATCTTATAGTTTTCTGGTTTGCAAAAGTAACCCTTTGGTAGTTCAGCTCGTTTACTTT GTGATAATCTCATTTGCTGGTTTCCTTGCTCTGAAGAATCTCAAGCCCCAGGGTAAGCCA GGTCCAAAGGATTTGGACCTATTGTTCACCTCTGTGTCTACACTTACTGTCTCGAGCATG GCAACAGTAGAGATGGAAGACTTATCTGACAGGCAACTCTGGGTTCTGATCCTTCTGATG CTAATGGGAGGAGAGGTGTTCACATCAATGCTAGGGCTCTACTTCAACAATGCCAATGCC AACAGAAATGAGAACAGCCAGAGAAGTTTACCTTCAATCAGCTTGGACATTGAATTCAAC AGTCCTGCAAACAATGGGGATCACAAAATTACGGAATGTGGCCAATCAGAAGAAACTATG TCGCAAAACCAGGTACAGCAAAACAAAAGCATAACATATAATCCTTGCGCTGTGTTGGTT CGCATAGTGACAGGTTATTTCGTAGCTACTGTCATTTCCAGTTCTGTCATCATTATTATT TACTTTTGGATTGATTCAGATGCAAGAAATGTACTGAAAAGTAAGGAGATCAATATGTAT ACCTTTTGCATCTTCACAGCAGTGTCCTCGTTCGCAAACTGTGGCTTCACGCCACTAAAT AGTAACATGCAACCCTTCAGAAAGAACTGGGTCCTTTTGCTCCTAGTGATCCCGCAGATT CTAGCAGGCAACACCTTGTTTTCACCACTCTTGCGGCTATGCGTATGGGTTTTGGGGAAG GTCAGTGGAAAAGCAGAGTATGCTTACATCCTTCAGCATCCTGGGGAGACTGGCTACAAA CATTTGCATGTGAGGAGAAATTCTGTTTACATTGTTCTGAGTGTTACTGGACTGATTCTA CTGCAAGTAATGTTTATTTGCTCGTTTGAGTGGAACTCAGAGAGCTTAGAGGGAATGAAT TGGTTACAGAAATTGGTAGGATTATTATTCCAGAGTGTTAATACAAGACAAGCCGGTGAA TCTATCCTTGATATATCAACACTTTCTCCATCAACTCTGTTGCTATTTGCAGTCGTCATG TACCTTCCTTCCGATGCTTCATTTCTCACTGCCAATGCTGATAACCAGCCCTTGACAGAT AAAAAGACAAACTCGATTAGCAGAGCACTGTGGAGGAATTTTACCGTTAACAAGCTTTCT TGTTTAGCAATGTTCACATTCCTGGCATGCATAACAGAAAGGAAGTCAATTTCTTCTGAT CCACTAAATTTCAACATCTTCAGCATAGTTTTTGAGATAATCAGCGCTTTCGGCAATGTA GGCTACTCACTAGGATACAGTTGCCAGAAGTTGTTGAAGCCTGATGCCACTTGCAAAGAT GCTTCCTACGGGTTCGTCGGCAGGTGGACCGAGGAGGGTAAGCTGATAGTTATCCTGGTG ATGTTCCTGGGGAGGCTCAAGGAGTTCATCCTGAAATGA

Peptide Sequence

PEP ID	Os04t0607500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:30724691:30726976:-1 gene:Os04g0607500 transcript:Os04t0607500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 4 description:Ion transporter , Na+ transport (Os04t0607500-01);Similar to Cation transporter HKT4. (Os04t0607500-02)
Sequence	MHPPSLVLDTLKRIKLYIAMKLLLPNSEVPRIYWEKAQHLCGFLSMKLISRARCVASSVK QSYSFLVCKSNPLVVQLVYFVIISFAGFLALKNLKPQGKPGPKDLDLLFTSVSTLTVSSM ATVEMEDLSDRQLWVLILLMLMGGEVFTSMLGLYFNNANANRNENSQRSLPSISLDIEFN SPANNGDHKITECGQSEETMSQNQVQQNKSITYNPCAVLVRIVTGYFVATVISSSVIIII YFWIDSDARNVLKSKEINMYTFCIFTAVSSFANCGFTPLNSNMQPFRKNWVLLLLVIPQI LAGNTLFSPLLRLCVWVLGKVSGKAEYAYILQHPGETGYKHLHVRRNSVYIVLSVTGLIL LQVMFICSFEWNSESLEGMNWLQKLVGLLFQSVNTRQAGESILDISTLSPSTLLLFAVVM YLPSDASFLTANADNQPLTDKKTNSISRALWRNFTVNKLSCLAMFTFLACITERKSISSD PLNFNIFSIVFEIISAFGNVGYSLGYSCQKLLKPDATCKDASYGFVGRWTEEGKLIVILV MFLGRLKEFILK

Transcript Sequence

Transcript ID	Os04t0607500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30724691:30726976:-1 gene:Os04g0607500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 4 description:Ion transporter , Na+ transport (Os04t0607500-01);Similar to Cation transporter HKT4. (Os04t0607500-02)
Sequence	TGTTGAAGAATGCATCCACCAAGTTTAGTGCTAGATACCTTGAAGCGTATCAAACTATAC ATAGCCATGAAGCTCCTGTTACCGAATTCGGAGGTGCCTCGGATCTATTGGGAGAAAGCT CAGCATCTCTGTGGGTTCCTGTCCATGAAGCTCATTTCCAGAGCCAGATGTGTGGCAAGT TCTGTCAAACAATCTTATAGTTTTCTGGTTTGCAAAAGTAACCCTTTGGTAGTTCAGCTC GTTTACTTTGTGATAATCTCATTTGCTGGTTTCCTTGCTCTGAAGAATCTCAAGCCCCAG GGTAAGCCAGGTCCAAAGGATTTGGACCTATTGTTCACCTCTGTGTCTACACTTACTGTC TCGAGCATGGCAACAGTAGAGATGGAAGACTTATCTGACAGGCAACTCTGGGTTCTGATC CTTCTGATGCTAATGGGAGGAGAGGTGTTCACATCAATGCTAGGGCTCTACTTCAACAAT GCCAATGCCAACAGAAATGAGAACAGCCAGAGAAGTTTACCTTCAATCAGCTTGGACATT GAATTCAACAGTCCTGCAAACAATGGGGATCACAAAATTACGGAATGTGGCCAATCAGAA GAAACTATGTCGCAAAACCAGGTACAGCAAAACAAAAGCATAACATATAATCCTTGCGCT GTGTTGGTTCGCATAGTGACAGGTTATTTCGTAGCTACTGTCATTTCCAGTTCTGTCATC ATTATTATTTACTTTTGGATTGATTCAGATGCAAGAAATGTACTGAAAAGTAAGGAGATC AATATGTATACCTTTTGCATCTTCACAGCAGTGTCCTCGTTCGCAAACTGTGGCTTCACG CCACTAAATAGTAACATGCAACCCTTCAGAAAGAACTGGGTCCTTTTGCTCCTAGTGATC CCGCAGATTCTAGCAGGCAACACCTTGTTTTCACCACTCTTGCGGCTATGCGTATGGGTT TTGGGGAAGGTCAGTGGAAAAGCAGAGTATGCTTACATCCTTCAGCATCCTGGGGAGACT GGCTACAAACATTTGCATGTGAGGAGAAATTCTGTTTACATTGTTCTGAGTGTTACTGGA CTGATTCTACTGCAAGTAATGTTTATTTGCTCGTTTGAGTGGAACTCAGAGAGCTTAGAG GGAATGAATTGGTTACAGAAATTGGTAGGATTATTATTCCAGAGTGTTAATACAAGACAA GCCGGTGAATCTATCCTTGATATATCAACACTTTCTCCATCAACTCTGTTGCTATTTGCA GTCGTCATGTACCTTCCTTCCGATGCTTCATTTCTCACTGCCAATGCTGATAACCAGCCC TTGACAGATAAAAAGACAAACTCGATTAGCAGAGCACTGTGGAGGAATTTTACCGTTAAC AAGCTTTCTTGTTTAGCAATGTTCACATTCCTGGCATGCATAACAGAAAGGAAGTCAATT TCTTCTGATCCACTAAATTTCAACATCTTCAGCATAGTTTTTGAGATAATCAGCGCTTTC GGCAATGTAGGCTACTCACTAGGATACAGTTGCCAGAAGTTGTTGAAGCCTGATGCCACT TGCAAAGATGCTTCCTACGGGTTCGTCGGCAGGTGGACCGAGGAGGGTAAGCTGATAGTT ATCCTGGTGATGTTCCTGGGGAGGCTCAAGGAGTTCATCCTGAAATGAG