Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0606700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:30678978:30681789:-1 gene:Os04g0606700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.5 protein. (Os04t0606700-01)
Sequence

ATGGCTCGCCTCCTCTCGCGAACCCTAGCCTTGGCCCGCGCGGACTCCGCCGCGGTGCCC
TCCTACGGCCGCCTCCATGTCCGTGGTGTCTCATCGAAGGTGGAGTTCATCGAGATCGAC
CTGTCGTCGGAGGACGCCCCCTCCTCGTCGTCCTCGTCCGGCGTCGAGGGGGGCGGCTTC
GGGCCGCGGGAGATGGGGATGCGGCGACTGGAGGACGCCATCCACGGGGTACTCGTGCGG
CGGGCGGCGCCGGAGTGGCTCCCCTTCGTGCCGGGAGGATCCTACTGGGTCCCGGAGATG
CGGCGCGGGGTCGCCGCCGACCTCGTGGGCACCGCCGTCCGCAGCGCGATTGGCGCCGCC
TGGAACGCGGAGGCGATGACGGAGGAGGAGATGATGTGCCTCACCACCATGCGCGGGTGG
CCGTCGGAGGCTTACTTCGTCGAAGGGAAATTTTCTCATCCAGTGGAGAGTTCAAGAAAA
GTTGCTACTCAAACTGATGAAGAGGAAAGCTAA

Peptide Sequence

PEP ID

Os04t0606700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:30678978:30681789:-1 gene:Os04g0606700 transcript:Os04t0606700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.5 protein. (Os04t0606700-01)
Sequence

MARLLSRTLALARADSAAVPSYGRLHVRGVSSKVEFIEIDLSSEDAPSSSSSSGVEGGGF
GPREMGMRRLEDAIHGVLVRRAAPEWLPFVPGGSYWVPEMRRGVAADLVGTAVRSAIGAA
WNAEAMTEEEMMCLTTMRGWPSEAYFVEGKFSHPVESSRKVATQTDEEES

Transcript Sequence

Transcript ID

Os04t0606700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30678978:30681789:-1 gene:Os04g0606700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.5 protein. (Os04t0606700-01)
Sequence

GCTTCTCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCATGGCTCGCCTCCTCTCGC
GAACCCTAGCCTTGGCCCGCGCGGACTCCGCCGCGGTGCCCTCCTACGGCCGCCTCCATG
TCCGTGGTGTCTCATCGAAGGTGGAGTTCATCGAGATCGACCTGTCGTCGGAGGACGCCC
CCTCCTCGTCGTCCTCGTCCGGCGTCGAGGGGGGCGGCTTCGGGCCGCGGGAGATGGGGA
TGCGGCGACTGGAGGACGCCATCCACGGGGTACTCGTGCGGCGGGCGGCGCCGGAGTGGC
TCCCCTTCGTGCCGGGAGGATCCTACTGGGTCCCGGAGATGCGGCGCGGGGTCGCCGCCG
ACCTCGTGGGCACCGCCGTCCGCAGCGCGATTGGCGCCGCCTGGAACGCGGAGGCGATGA
CGGAGGAGGAGATGATGTGCCTCACCACCATGCGCGGGTGGCCGTCGGAGGCTTACTTCG
TCGAAGGGAAATTTTCTCATCCAGTGGAGAGTTCAAGAAAAGTTGCTACTCAAACTGATG
AAGAGGAAAGCTAATTTGTTTGCATCACTTTAGCAGGGACCCCCTGAGAAATAGGAAGCT
TGGAGCTGTCGAGTTCTGCTGATGTTGTACATACAGACAGCTATGAACGTGAGCACCAGC
GTGTCATCTCATCAGTCGCTTCAGAAGATGATGTGCCCAGTGCTGTTACTACTATCAAAA
TGCCATGAACATGGATCCGTGTATTCCTGCAACACAGTGCCTTGCGCTATGGTCTTTTTT
TCTGAGAGCTTGTACTTGTACCTGTAGAATGTAGTGTATGCATCAAGCTGCTGCTACTGA
ATAAAAGAAAAAAGAAAAATATATGTTGTGGGTTGGGCTGAATGCCTGTACCCCATGAGC
ACAGGATGCTCTCGATCATTGAGCGTGCTGTGCACGTCGTGGGCCTCCAACTAAAACTGT
AATCATCCTTGGGCAGAAGACGGCAGAAATCTTGAACTTTTTGTTTTGTCTTGTTCTTCG
GCTGATAATGCTGCTTCTTCTGATAACAATTGCCCCTGGAAATGCTAATAATGTAAGAAG
AGCACTGCTATACGT