Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0606400-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:30621166:30626102:-1 gene:Os04g0606400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113). (Os04t0606400-01);Similar to OSIGBa0113I13.2 protein. (Os04t0606400-02)
Sequence	GAGGCTATGGCCCATGCTTGGAATTCCTATGTGAAGTATGCCTGGGGAATGGATGAACTT CAGCCACAATCAAAGAATGGTGTCAATAGCTTTGGTGGTCTCGGGGCAACTCTTGTGGAC TCACTTGATACACTGTATATAATGGGCCTAAAGGATGAATTTCAGAGGGCCAGAGACTGG GTGGCCGATTCACTAAGCTTTGACAAGGATTACGATGCAAGTGTCTTTGAAACGACCATA AGAGTTGTTGGAGGCCTCCTCAGTGCATATGATCTATCTGGTGACAAAGTATTTCTTGAG AAGGCCAAAGATATTACTGACCGTCTACTACCTGCTTGGGATACACCATCTGGTATCCCT TATAATAGAATCAACCTAGCTCATGGACGAGCCCATAATCCTGGATGGACCAATGGTGAT AGTATCCTTGCTGATTCTGGCACGGAGCAACTTGAATTTATAGCTTTGTCACAGAGGACT GGTGATCCCAAGTATCAACAAAAGGCAGAGAATGTCATCAGACAGCTTCAGAAGATATAC CCAAGCGATGGCTTACTCCCTATATACATAAACCCTCATTCAGGAACTGCGTCGTACTCA ACAATTACATTTGGTGCAATGGGAGATAGCTTCTACGAGTACTTGCTCAAGGTTTGGGTC CAGGGGAATAAAACTGAGCATGTAAAGCATTACAGACAAATGTGGGAGACATCAATGGAA GGCCTACTAAGCTTGACCAAAAAAACTACACCCTCTAATTACTACTACATTTGCGAGAAG AATGGTGGTTCATTGTCTGACAAGATGGATGAGCTTGCATGTTTTGCCCCTGGTATGCTG GCACTGGGGGCCTCTGGCTATGAGGAGACTGAAAAGGCTGAAGAAATTATGAATCTTGCG AAAGAGCTTGCTCGGACCTGTTATAACTTCTACCAAACAACTCCTACAAAGTTGGCTGGG GAGAATTATTTTTTCCATACTGGACAGGATATGAACGTGGGCACATCATGGAATATCCTG AGACCTGAGACTGTCGAATCACTTATGTACTTGTGGCGTCTTACGGGGAACAAAACATAC CAAGACTGGGGGTGGGACATATTCCAGGCATTTGAAAAGAACTCCCGCATAGAATCTGGT TACGTTGGGCTGAGAGATGTGAATACTGGCGAGAAGGATAACATGATGCAAAGCTTCTTC CTAGCAGAGACTCTCAAGTACCTATACCTCCTGTTCTCTCCTCCATCAGTCATATCCTTC GATGAGTGGGTCTTCAATACCGAAGCCCACCCATTGCGAATTGTTCCTTTAAATGACAAT AGCAAAGCCCACTCAGTAGGCATTGCAACACCGACGGTACGACCGTTCGGGAGGAAGCAG GGGAAACAAGAGTAG

Peptide Sequence

PEP ID	Os04t0606400-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:30621166:30626102:-1 gene:Os04g0606400 transcript:Os04t0606400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113). (Os04t0606400-01);Similar to OSIGBa0113I13.2 protein. (Os04t0606400-02)
Sequence	EAMAHAWNSYVKYAWGMDELQPQSKNGVNSFGGLGATLVDSLDTLYIMGLKDEFQRARDW VADSLSFDKDYDASVFETTIRVVGGLLSAYDLSGDKVFLEKAKDITDRLLPAWDTPSGIP YNRINLAHGRAHNPGWTNGDSILADSGTEQLEFIALSQRTGDPKYQQKAENVIRQLQKIY PSDGLLPIYINPHSGTASYSTITFGAMGDSFYEYLLKVWVQGNKTEHVKHYRQMWETSME GLLSLTKKTTPSNYYYICEKNGGSLSDKMDELACFAPGMLALGASGYEETEKAEEIMNLA KELARTCYNFYQTTPTKLAGENYFFHTGQDMNVGTSWNILRPETVESLMYLWRLTGNKTY QDWGWDIFQAFEKNSRIESGYVGLRDVNTGEKDNMMQSFFLAETLKYLYLLFSPPSVISF DEWVFNTEAHPLRIVPLNDNSKAHSVGIATPTVRPFGRKQGKQE

Transcript Sequence

Transcript ID	Os04t0606400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30621166:30626102:-1 gene:Os04g0606400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC 3.2.1.113). (Os04t0606400-01);Similar to OSIGBa0113I13.2 protein. (Os04t0606400-02)
Sequence	AGGAGGCTATGGCCCATGCTTGGAATTCCTATGTGAAGTATGCCTGGGGAATGGATGAAC TTCAGCCACAATCAAAGAATGGTGTCAATAGCTTTGGTGGTCTCGGGGCAACTCTTGTGG ACTCACTTGATACACTGTATATAATGGGCCTAAAGGATGAATTTCAGAGGGCCAGAGACT GGGTGGCCGATTCACTAAGCTTTGACAAGGATTACGATGCAAGTGTCTTTGAAACGACCA TAAGAGTTGTTGGAGGCCTCCTCAGTGCATATGATCTATCTGGTGACAAAGTATTTCTTG AGAAGGCCAAAGATATTACTGACCGTCTACTACCTGCTTGGGATACACCATCTGGTATCC CTTATAATAGAATCAACCTAGCTCATGGACGAGCCCATAATCCTGGATGGACCAATGGTG ATAGTATCCTTGCTGATTCTGGCACGGAGCAACTTGAATTTATAGCTTTGTCACAGAGGA CTGGTGATCCCAAGTATCAACAAAAGGCAGAGAATGTCATCAGACAGCTTCAGAAGATAT ACCCAAGCGATGGCTTACTCCCTATATACATAAACCCTCATTCAGGAACTGCGTCGTACT CAACAATTACATTTGGTGCAATGGGAGATAGCTTCTACGAGTACTTGCTCAAGGTTTGGG TCCAGGGGAATAAAACTGAGCATGTAAAGCATTACAGACAAATGTGGGAGACATCAATGG AAGGCCTACTAAGCTTGACCAAAAAAACTACACCCTCTAATTACTACTACATTTGCGAGA AGAATGGTGGTTCATTGTCTGACAAGATGGATGAGCTTGCATGTTTTGCCCCTGGTATGC TGGCACTGGGGGCCTCTGGCTATGAGGAGACTGAAAAGGCTGAAGAAATTATGAATCTTG CGAAAGAGCTTGCTCGGACCTGTTATAACTTCTACCAAACAACTCCTACAAAGTTGGCTG GGGAGAATTATTTTTTCCATACTGGACAGGATATGAACGTGGGCACATCATGGAATATCC TGAGACCTGAGACTGTCGAATCACTTATGTACTTGTGGCGTCTTACGGGGAACAAAACAT ACCAAGACTGGGGGTGGGACATATTCCAGGCATTTGAAAAGAACTCCCGCATAGAATCTG GTTACGTTGGGCTGAGAGATGTGAATACTGGCGAGAAGGATAACATGATGCAAAGCTTCT TCCTAGCAGAGACTCTCAAGTACCTATACCTCCTGTTCTCTCCTCCATCAGTCATATCCT TCGATGAGTGGGTCTTCAATACCGAAGCCCACCCATTGCGAATTGTTCCTTTAAATGACA ATAGCAAAGCCCACTCAGTAGGCATTGCAACACCGACGGTACGACCGTTCGGGAGGAAGC AGGGGAAACAAGAGTAGATTTGAACCATAGAGCACAGGAATTTTTCATCTGCCCTCTGAT TTTTGACCTGCCTGATCCAAGGTTCTGACAGGAGCAGCGATTCTGCCTGTAGCAGTATAA GGGCTGAAAGTCATGGCAATAGGCTGTTTAGGCAACGGAATTATAGGTAGAGCACGATGA GATATTCTGGGGCACATTGAAACTTCAGAGTATAAATCGAAGACCAATAACCCCATGAAA GTTTATATTTCTGTACTTGTTTGCGCTCCCTGCATTATTGATCTGTCATGTAAATCTAAC AGTGTCCATATGTTGTTGGTTACACGGGGGCTTCCGTGGAGTTGTATTTTCATTACGTGG CCCGACTTGTGACATTTTGAAACACGGTCTATAAAAACGGATTGCATTTTACTTCCCC