Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0606000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:30608872:30610396:-1 gene:Os04g0606000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os04t0606000-01)
Sequence

ATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCTCCGAACCGCGATCGTC
TCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCTCACCTTCCTGGACGCG
CAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCGCCTCGGCCCCGGCGGC
GACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGCCCGGGCGCTCCACGCC
TTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGACCAACCGGTACGAGCTC
TTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCACGACGGCGTCGGCGTC
GGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGCCAGGATTGCCACGTTC
GTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGCCACCGTGCTGCCGCCC
GACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGCCTGCGATGGGGTGAGC
TCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGACCGGGTGCTCCCGGAG
CCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACATGTACGACGCGTTCGCC
TCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGTCGCCGGCAAGCTCCTC
GCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGACGCCGTCGCCGGCGAG
GCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGTCGCCACGCTCGGCCTC
ACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGCGAAGAAGGGCCTCGCGGTGACGGC
CGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCGGCTGGAGCCCCGCGTCCCCGAA
AAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCACGGCACACGAGACGGAGCTCGCC
ACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTGCGCCGCGGTCGCCGCCGGCATC
GACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCGGTGGGTGGAGCGCATCACCGAG
GCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGATCGACGAGGTTCGGCGTGTACGAC
ATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGATGTCGTGTCCGTGGCGAAGACCGAC
GCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGCGGCATCGAGGTGGGCATCGCTCTG
TCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTCGCCGACGCCATCGCCCTGCTCTCC
TCGTCTTCCCACTGCAACTAG

Peptide Sequence

PEP ID

Os04t0606000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:30608872:30610396:-1 gene:Os04g0606000 transcript:Os04t0606000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os04t0606000-01)
Sequence

MAQPRTHVVGGLRALRTAIVSPSPAPPAGERALPLTFLDAQWLSAHPVERVFFYRLGPGG
DDVDAVLSRLVESLARALHAFYPLAGRVRLTPGETNRYELFYQPGDGVAFTVAEHDGVGV
GVDELADTDEPREVARIATFVPELPKGGAVLALQATVLPPDRRGLALGVTVHHSACDGVS
STHFLHTWAAACAGDRVLPEPPVIDRTIIRDRNDMYDAFASPASEAKHAFDSPDVAGKLL
ATFTLSRQQLQNVKDAVAGEAARRGVAPPRCTSLVATLGLTWLCFRRAGPDGEEGPRGDG
RAHLVFPVDHRSRLEPRVPEKYLGNCIGPGFATAHETELATTTTTADGLFTACAAVAAGI
DEAVRGEPTYWERWVERITEACADDMSLSVAGSTRFGVYDMDFGFGRPAKVDVVSVAKTD
AMSVAEDRSGSGGIEVGIALSPARMERFRRWLADAIALLSSSSHCN

Transcript Sequence

Transcript ID

Os04t0606000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30608872:30610396:-1 gene:Os04g0606000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase family protein. (Os04t0606000-01)
Sequence

ACCTGTCCGGCGGCGACACACACAATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTC
CGCGCCCTCCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCT
CTACCTCTCACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTC
TTCTACCGCCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAG
TCGCTGGCCCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCC
GGCGAGACCAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTC
GCCGAGCACGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGG
GAGGTTGCCAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCG
TTGCAGGCCACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCAC
CACTCCGCCTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGC
GCCGGCGACCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGC
AACGACATGTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCG
CCCGACGTCGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAAC
GTCAAGGACGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACG
TCGCTCGTCGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGC
GAAGAAGGGCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCG
CGGCTGGAGCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCC
ACGGCACACGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCT
TGCGCCGCGGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAG
CGGTGGGTGGAGCGCATCACCGAGGCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGA
TCGACGAGGTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGAT
GTCGTGTCCGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGC
GGCATCGAGGTGGGCATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTC
GCCGACGCCATCGCCCTGCTCTCCTCGTCTTCCCACTGCAACTAGCTAGAGTGGAATCTG
CAAAAATAATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATTTATTACCCTAAAAAAT
CTAATCCTTTGAATCTTTTGGTATC