Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0605500-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:30572141:30578174:-1 gene:Os04g0605500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 11 description:P-type IIB Ca(2+) ATPase, Stress tolerance (Os04t0605500-01);Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8). (Os04t0605500-02);Similar to P-type ATPase (Fragment). (Os04t0605500-03)
Sequence	AATGGTCAAGATCCAGAGGTGACTGGATCACCGACCGAAAAGGCTATACTGTCTTGGGGG CTGAAGCTTGGCATGAGATTCAATGACACAAGAACAAAGTCCTCTATTCTTCATGTTTTC CCATTCAACTCAGAGAAAAAAAGAGGCGGGGTTGCAGTGCATCTGGGTGGCTCTGAGTCT GAGGTACACATACACTGGAAGGGAGCTGCAGAAATTATTTTGGATTCATGCAAAAGCTGG CTTGCTGCAGATGGTTCAAAGCATTCAATGACACCTGAGAAAATTAGTGAATTCAAGAAA TTCATAGAAGATATGGCTGCTTCGAGCCTCCGGTGTGTTGCCTTTGCTTATAGAACATAT GAGATGGTTGATGTCCCAAGTGAGGACCGGAGGGCTGATTGGATATTGCCTGAAGATGAC TTGATTATGCTTGGCATAGTTGGGATAAAGGATCCTTGCCGCCCGGGTGTTAAAGATTCT GTTCGGTTATGTGCAGCAGCTGGCATTAAGGTCCGCATGGTTACTGGAGACAACCTTCAA ACTGCCAGAGCCATTGCCTTGGAGTGTGGAATTTTATCTGATCCCAATGTGTCAGAGCCA GTCATTATTGAAGGAAAGGCTTTTCGTGCACTGTCAGATTTAGAAAGGGAAGAAGCTGCA GAAAAGATTTCGGTGATGGGGAGGTCTTCACCAAATGACAAGCTTTTACTTGTTAAAGCA TTAAGAAAAAGAGGTCATGTTGTTGCTGTGACTGGAGATGGCACAAATGATGCCCCAGCT TTGCATGAGGCAGATATAGGTCTCTCCATGGGCATCCAGGGAACTGAAGTTGCCAAGGAG AGTTCTGATATTATCATCTTGGATGACAATTTTGCATCGGTCGTGAGGGTTGTCAGATGG GGTCGCTCGGTTTATGCAAACATTCAGAAATTTATACAGTTTCAGTTAACCGTCAACGTT GCAGCCTTGATTATTAACGTTGTTGCTGCTGTCAGTTCTGGGAATGTTCCCCTGAACGCT GTTCAGCTACTGTGGGTTAACCTAATCATGGATACTCTGGGTGCTCTTGCACTGGCGACA GAACCACCTACTGACCATCTTATGCAGAGACCACCAGTTGGCAGAAGGGAACCCTTGATA ACAAATGTCATGTGGAGAAACTTAATCATAATGGCTCTGTTTCAAGTTATAGTCCTCCTT ACTCTCAACTTTAGGGGCACAAGCCTTTTGCAGCTAAAAAACGACAACCAGGCACATGCA GACAAAGTCAAAAATACCTTCATATTCAATACATTTGTTCTCTGTCAGGTGTTCAATGAA TTCAATGCTAGGAAGCCCGATGAGCTGAACATATTCAAGGGCATTACTGGGAACCATCTC TTTATGGCCATTGTTGCCATAACAGTTGTACTGCAGGCGCTTATTGTTGAGTTCCTTGGC AAGTTTACATCGACAACCAGACTCACCTGGCAGTTGTGGTTGGTGTCAATAGGTCTCGCC TTTTTTAGCTGGCCGTTGGCATTTGTGGGAAAGCTTATCCCTGTCCCAGAGAGACCATTA GGAGATTTCTTTGCATGTTGCTGCCCAGGAAGTAAACAAGCTGCTGATGCCAAGGGTGAT GACGCTGATCACAGCGATGTATGA

Peptide Sequence

PEP ID	Os04t0605500-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:30572141:30578174:-1 gene:Os04g0605500 transcript:Os04t0605500-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 11 description:P-type IIB Ca(2+) ATPase, Stress tolerance (Os04t0605500-01);Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8). (Os04t0605500-02);Similar to P-type ATPase (Fragment). (Os04t0605500-03)
Sequence	NGQDPEVTGSPTEKAILSWGLKLGMRFNDTRTKSSILHVFPFNSEKKRGGVAVHLGGSES EVHIHWKGAAEIILDSCKSWLAADGSKHSMTPEKISEFKKFIEDMAASSLRCVAFAYRTY EMVDVPSEDRRADWILPEDDLIMLGIVGIKDPCRPGVKDSVRLCAAAGIKVRMVTGDNLQ TARAIALECGILSDPNVSEPVIIEGKAFRALSDLEREEAAEKISVMGRSSPNDKLLLVKA LRKRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVRVVRW GRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQLLWVNLIMDTLGALALAT EPPTDHLMQRPPVGRREPLITNVMWRNLIIMALFQVIVLLTLNFRGTSLLQLKNDNQAHA DKVKNTFIFNTFVLCQVFNEFNARKPDELNIFKGITGNHLFMAIVAITVVLQALIVEFLG KFTSTTRLTWQLWLVSIGLAFFSWPLAFVGKLIPVPERPLGDFFACCCPGSKQAADAKGD DADHSDV

Transcript Sequence

Transcript ID	Os04t0605500-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30572141:30578174:-1 gene:Os04g0605500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 11 description:P-type IIB Ca(2+) ATPase, Stress tolerance (Os04t0605500-01);Similar to Calcium-transporting ATPase 8, plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8). (Os04t0605500-02);Similar to P-type ATPase (Fragment). (Os04t0605500-03)
Sequence	AGAATGGTCAAGATCCAGAGGTGACTGGATCACCGACCGAAAAGGCTATACTGTCTTGGG GGCTGAAGCTTGGCATGAGATTCAATGACACAAGAACAAAGTCCTCTATTCTTCATGTTT TCCCATTCAACTCAGAGAAAAAAAGAGGCGGGGTTGCAGTGCATCTGGGTGGCTCTGAGT CTGAGGTACACATACACTGGAAGGGAGCTGCAGAAATTATTTTGGATTCATGCAAAAGCT GGCTTGCTGCAGATGGTTCAAAGCATTCAATGACACCTGAGAAAATTAGTGAATTCAAGA AATTCATAGAAGATATGGCTGCTTCGAGCCTCCGGTGTGTTGCCTTTGCTTATAGAACAT ATGAGATGGTTGATGTCCCAAGTGAGGACCGGAGGGCTGATTGGATATTGCCTGAAGATG ACTTGATTATGCTTGGCATAGTTGGGATAAAGGATCCTTGCCGCCCGGGTGTTAAAGATT CTGTTCGGTTATGTGCAGCAGCTGGCATTAAGGTCCGCATGGTTACTGGAGACAACCTTC AAACTGCCAGAGCCATTGCCTTGGAGTGTGGAATTTTATCTGATCCCAATGTGTCAGAGC CAGTCATTATTGAAGGAAAGGCTTTTCGTGCACTGTCAGATTTAGAAAGGGAAGAAGCTG CAGAAAAGATTTCGGTGATGGGGAGGTCTTCACCAAATGACAAGCTTTTACTTGTTAAAG CATTAAGAAAAAGAGGTCATGTTGTTGCTGTGACTGGAGATGGCACAAATGATGCCCCAG CTTTGCATGAGGCAGATATAGGTCTCTCCATGGGCATCCAGGGAACTGAAGTTGCCAAGG AGAGTTCTGATATTATCATCTTGGATGACAATTTTGCATCGGTCGTGAGGGTTGTCAGAT GGGGTCGCTCGGTTTATGCAAACATTCAGAAATTTATACAGTTTCAGTTAACCGTCAACG TTGCAGCCTTGATTATTAACGTTGTTGCTGCTGTCAGTTCTGGGAATGTTCCCCTGAACG CTGTTCAGCTACTGTGGGTTAACCTAATCATGGATACTCTGGGTGCTCTTGCACTGGCGA CAGAACCACCTACTGACCATCTTATGCAGAGACCACCAGTTGGCAGAAGGGAACCCTTGA TAACAAATGTCATGTGGAGAAACTTAATCATAATGGCTCTGTTTCAAGTTATAGTCCTCC TTACTCTCAACTTTAGGGGCACAAGCCTTTTGCAGCTAAAAAACGACAACCAGGCACATG CAGACAAAGTCAAAAATACCTTCATATTCAATACATTTGTTCTCTGTCAGGTGTTCAATG AATTCAATGCTAGGAAGCCCGATGAGCTGAACATATTCAAGGGCATTACTGGGAACCATC TCTTTATGGCCATTGTTGCCATAACAGTTGTACTGCAGGCGCTTATTGTTGAGTTCCTTG GCAAGTTTACATCGACAACCAGACTCACCTGGCAGTTGTGGTTGGTGTCAATAGGTCTCG CCTTTTTTAGCTGGCCGTTGGCATTTGTGGGAAAGCTTATCCCTGTCCCAGAGAGACCAT TAGGAGATTTCTTTGCATGTTGCTGCCCAGGAAGTAAACAAGCTGCTGATGCCAAGGGTG ATGACGCTGATCACAGCGATGTATGAAGCTACGGATCAGAGGGAAACTTGTGCCAAGGTT TACTTTTAACATCATTAAGGTGTAATTAACTGCTATCAGGATTGTACATACACTATGCTT CACATGGATAGGTCTGATTACCTTTGGAAAATTGTGGCACTATTAACCATGCGTTCAGAT ACTTGACGGGGCAAGGTGTGATTTTGCGGCAGAGCTGCTGCAGGGAGATTTCTAATGGCG TTTTATTAGCGTATTGGAGAAAAGATTTTGGATACTTATTTGAGCTTACTTCACTTTAAC GTTGCTCCAGTTTTACTTCTTGGAGTTAGAGCCTATGCAGATATATAGT