Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0604800-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:30518927:30520167:1 gene:Os04g0604800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 7 description:Similar to OSIGBa0118P15.11 protein. (Os04t0604800-00)
Sequence

ATGGCGCCAATGCCGCTTGCTTCTAGCTCCTCAAAGCTATGCAGCTTGCTGATCCTGTGC
CTAGCCTTCCTCGCGGCCGTGGACCGGAGCACGGCGGGCATCTTCGATGAGATCGAGCTC
ATCTGGGGCGCGAGCCGCACCTACTTCTTCATGGATGGCGACTCCGAGGCGCTGGCGCTC
TCCCTCGACCAGTCGCAGGGCTCCTGCTTCCGCTCCAGGGAGAAGTACCTCTACGTCCAG
ATCGACGTCGAGATCAAGCTCATCGAGGGAGACTCCGCCGGCACCGTCTGCACAATCTAC
ACGATCTCGGAGGGGCCGTGGGAGATTCACGACGAGATCGACCTGGAGTTCCTCGGCAAC
GTCACCGGCGAGCCATACACGCTCCACACCAACATCTTCGCCAACGGCGTCGGCGGCCGC
GAGCAGCAGTTCCGCCTCTGGTTCGACCCCACCGCCGACTACCACACCTACTCCATCGTC
TGGAACCCCAAGCGCATCCTGATACTGGTGGACGGGAAGGCGATCAGGGACTTCAAGAAC
AACGAGGACCAGGGCGTGCCGTTCCCGACGTGGCAGTCGATGCGGACGTTCGGGAGCCTG
TGGAGCGCGGAGGACTGGGCGACGCAGGGGGGCCGGGTCAAGACCGACTGGAAGCAGGCG
CCGTTCGTCACCTACTACCGCAACTACAACGTCACCTGGTGCCGCCCGTCCCCCGGCGTG
GCGTGGTGCGGCGACGAGCCCAAGGACTCGACGCGCTTCGACCTGGACGCCAATACGCTC
TCCGACCTGCAGTGGGTGCGCTCCAACTCCATGATCTACAACTACTGCGACGACAGTGTC
AGGTTCAACGCCACCACCCTCCCCAAGGAGTGCACGCTGCAATGA

Peptide Sequence

PEP ID

Os04t0604800-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:30518927:30520167:1 gene:Os04g0604800 transcript:Os04t0604800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 7 description:Similar to OSIGBa0118P15.11 protein. (Os04t0604800-00)
Sequence

MAPMPLASSSSKLCSLLILCLAFLAAVDRSTAGIFDEIELIWGASRTYFFMDGDSEALAL
SLDQSQGSCFRSREKYLYVQIDVEIKLIEGDSAGTVCTIYTISEGPWEIHDEIDLEFLGN
VTGEPYTLHTNIFANGVGGREQQFRLWFDPTADYHTYSIVWNPKRILILVDGKAIRDFKN
NEDQGVPFPTWQSMRTFGSLWSAEDWATQGGRVKTDWKQAPFVTYYRNYNVTWCRPSPGV
AWCGDEPKDSTRFDLDANTLSDLQWVRSNSMIYNYCDDSVRFNATTLPKECTLQ

Transcript Sequence

Transcript ID

Os04t0604800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30518927:30520167:1 gene:Os04g0604800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 7 description:Similar to OSIGBa0118P15.11 protein. (Os04t0604800-00)
Sequence

ATGGCGCCAATGCCGCTTGCTTCTAGCTCCTCAAAGCTATGCAGCTTGCTGATCCTGTGC
CTAGCCTTCCTCGCGGCCGTGGACCGGAGCACGGCGGGCATCTTCGATGAGATCGAGCTC
ATCTGGGGCGCGAGCCGCACCTACTTCTTCATGGATGGCGACTCCGAGGCGCTGGCGCTC
TCCCTCGACCAGTCGCAGGGCTCCTGCTTCCGCTCCAGGGAGAAGTACCTCTACGTCCAG
ATCGACGTCGAGATCAAGCTCATCGAGGGAGACTCCGCCGGCACCGTCTGCACAATCTAC
ACGATCTCGGAGGGGCCGTGGGAGATTCACGACGAGATCGACCTGGAGTTCCTCGGCAAC
GTCACCGGCGAGCCATACACGCTCCACACCAACATCTTCGCCAACGGCGTCGGCGGCCGC
GAGCAGCAGTTCCGCCTCTGGTTCGACCCCACCGCCGACTACCACACCTACTCCATCGTC
TGGAACCCCAAGCGCATCCTGATACTGGTGGACGGGAAGGCGATCAGGGACTTCAAGAAC
AACGAGGACCAGGGCGTGCCGTTCCCGACGTGGCAGTCGATGCGGACGTTCGGGAGCCTG
TGGAGCGCGGAGGACTGGGCGACGCAGGGGGGCCGGGTCAAGACCGACTGGAAGCAGGCG
CCGTTCGTCACCTACTACCGCAACTACAACGTCACCTGGTGCCGCCCGTCCCCCGGCGTG
GCGTGGTGCGGCGACGAGCCCAAGGACTCGACGCGCTTCGACCTGGACGCCAATACGCTC
TCCGACCTGCAGTGGGTGCGCTCCAACTCCATGATCTACAACTACTGCGACGACAGTGTC
AGGTTCAACGCCACCACCCTCCCCAAGGAGTGCACGCTGCAATGAGAAGAAGATCGAATT
GATCGAGGGGATCGATCGATTGCATGCTGATTCATCAT