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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0603400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:30446932:30451385:-1 gene:Os04g0603400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.3 protein. (Os04t0603400-01)
Sequence

ATGGCGTGGTGGCGGAAGAAGGTCGTCTTCCCGGCGCGCCGCGCGTGGGCCGCCGTCTCC
ACCCGCGTCCGCGCCCGCAAGCCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGGAT
GTGCAAACCTGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGCTG
GAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGGCG
TGGTCCAGCCGGTCGTCGTCGATCGCGGCCGCGCAATAG

Peptide Sequence

PEP ID

Os04t0603400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:30446932:30451385:-1 gene:Os04g0603400 transcript:Os04t0603400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.3 protein. (Os04t0603400-01)
Sequence

MAWWRKKVVFPARRAWAAVSTRVRARKPGSGGSILKLHEDVQTCGYKDVQVMFEILKSEL
EESRAPTKQRKPPAWRPPSAWSSRSSSIAAAQ

Transcript Sequence

Transcript ID

Os04t0603400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30446932:30451385:-1 gene:Os04g0603400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.3 protein. (Os04t0603400-01)
Sequence

CAAACAAACAAACACGCACGCACACCACTACTCCATCAGCAGCAGCCAGCGAGCCCGCGC
CGCAGCCACCCGCGCGCGCGCGCGCGGCCGGTGAGGTGTGTGAGATAGATCGTCGAGCGC
GCGTACGTCGATCGTCGAGGCTGGCCGCCGCCGCGAGGATACCGGCGCCGGTGCGCGCGG
TGATGGCGTGGTGGCGGAAGAAGGTCGTCTTCCCGGCGCGCCGCGCGTGGGCCGCCGTCT
CCACCCGCGTCCGCGCCCGCAAGCCAGGCAGTGGAGGCAGCATACTGAAGCTTCACGAGG
ATGTGCAAACCTGTGGATACAAGGACGTGCAGGTGATGTTCGAGATTCTGAAATCCGAGC
TGGAGGAATCACGCGCCCCGACGAAGCAGCGAAAGCCGCCGGCGTGGAGGCCGCCGTCGG
CGTGGTCCAGCCGGTCGTCGTCGATCGCGGCCGCGCAATAGAGACGTCGACGGCCATGAC
ACGGACACGCGGATTGGCAGACACCGGCTAATAATAAGAAGTTAAGAACACCAACTTTAG
TACTACGTGATAGCTATTAGTTTCGTACTTAAATGTCTAATCGCAGTTGTCAGGCATCAT
CATCCATCCCCCTGCCCGTCTATCCGGCAAAAGAGCGAAAATTTTCGGTAGCATCAGGTC
ATAAGCATCTGAAAGTCTGAAAAAGAAAAACTGTACATACTACATGGCGGTTGCGCTGAA
TTCTCGCAAACTCTGGAGGAAAAGATGGAGTAAGAGGGGTTTATTTTTCAAGTGTATTTT
CTATCCTGTTTACCTATGATTCATGATGTATCGTTTTATGTTCTGTTGAAGAATCTCTGA
AATGAAAGATTTTTCAGTATGTGCCTC