Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0603000-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:30433286:30437475:1 gene:Os04g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.1 protein. (Os04t0603000-00)
Sequence

ATGGCCACCGCCTCCTGGCCGCCGACGCCCAGGTCTCCGCGACCGCAGGCGCCGTCCGTG
GAGCGCGCCAAGGGCCCCTCAGGCCTCGACAAGGTCGTGCTCCGCGAGGCGCGGGGATTC
TCCGCGGAGGTCCATTTATATGGAGGTCAAGTGACCTCTTGGAAGAATGACCGTGGGGAT
GAATTACTTTTTGTAAGCAGCAAGGCCACTTTCAAGCCTCCAAAAGCAATCCGTGGTGGC
ATACCCATTTGCTTCCCCCAATTTGGCACTCATGGAATTCTTGAGAAACATGGATTTGCA
AGGAATCGGTTCTGGGCTATTGATGATAATCCTCCACCTTTTCCAACAAGCACTGCTGCT
AAAGCTTTTGTTGATCTTATTCTGAAGACTTCTGAAGAAGATCTCAAGATATGGCCTCAT
AGCTTTGAATTCCGATTAAGAGTTGCTCTTGGGCCTGGAGGAGATTTGGCTCTCACTTCT
CGAATAAGGAACACCAACACTGATGGAAGACCATTCTCATTTACATTTGCATACCACACG
TACTTCTCTGTATCTGACATAAGTGAAGTGCGCATTGAAGGCTTGGAGACACTGGACTAC
ATTGACTGTCTGAGGGGAAAAGAGCGATCCACAGAGCAAGGGGACGCTATTGTGTTCGAA
TCAGAGGTTGACAAAATATATCTAGATGCACCAGCAAAAATTGCAATCATTGATCATGAG
AAGAAACGGACATTTGTCTTAAGGAAAGACGGGCTTCCAGATGCTGGTAAGCTTATTTAT
CACAGTAATTTTCTTTTGTTAAAGAATATGATTGTAGATCTTTGTATCCAGCTGACAAAA
AACATGCAAGACTTTGGGGATGAAGAATACAAACATATGTTGTGTGTTGAACCTGCAGCC
GTTGAGAAGCCCATTACCTTGAAGCCTGGCGAAGAGTGGAAAGGAAAAATGGATCTCTCC
GCAGTTCCTTCCAGTTACTGTAGCGGGCAGTTAGATCCAAATAAGGTTCTTCAAGGCTGA

Peptide Sequence

PEP ID

Os04t0603000-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:30433286:30437475:1 gene:Os04g0603000 transcript:Os04t0603000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.1 protein. (Os04t0603000-00)
Sequence

MATASWPPTPRSPRPQAPSVERAKGPSGLDKVVLREARGFSAEVHLYGGQVTSWKNDRGD
ELLFVSSKATFKPPKAIRGGIPICFPQFGTHGILEKHGFARNRFWAIDDNPPPFPTSTAA
KAFVDLILKTSEEDLKIWPHSFEFRLRVALGPGGDLALTSRIRNTNTDGRPFSFTFAYHT
YFSVSDISEVRIEGLETLDYIDCLRGKERSTEQGDAIVFESEVDKIYLDAPAKIAIIDHE
KKRTFVLRKDGLPDAGKLIYHSNFLLLKNMIVDLCIQLTKNMQDFGDEEYKHMLCVEPAA
VEKPITLKPGEEWKGKMDLSAVPSSYCSGQLDPNKVLQG

Transcript Sequence

Transcript ID

Os04t0603000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30433286:30437475:1 gene:Os04g0603000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0118P15.1 protein. (Os04t0603000-00)
Sequence

CGGCTACACGAGAGCTTCCCGTTGCGCGAGCATGGCCACCGCCTCCTGGCCGCCGACGCC
CAGGTCTCCGCGACCGCAGGCGCCGTCCGTGGAGCGCGCCAAGGGCCCCTCAGGCCTCGA
CAAGGTCGTGCTCCGCGAGGCGCGGGGATTCTCCGCGGAGGTCCATTTATATGGAGGTCA
AGTGACCTCTTGGAAGAATGACCGTGGGGATGAATTACTTTTTGTAAGCAGCAAGGCCAC
TTTCAAGCCTCCAAAAGCAATCCGTGGTGGCATACCCATTTGCTTCCCCCAATTTGGCAC
TCATGGAATTCTTGAGAAACATGGATTTGCAAGGAATCGGTTCTGGGCTATTGATGATAA
TCCTCCACCTTTTCCAACAAGCACTGCTGCTAAAGCTTTTGTTGATCTTATTCTGAAGAC
TTCTGAAGAAGATCTCAAGATATGGCCTCATAGCTTTGAATTCCGATTAAGAGTTGCTCT
TGGGCCTGGAGGAGATTTGGCTCTCACTTCTCGAATAAGGAACACCAACACTGATGGAAG
ACCATTCTCATTTACATTTGCATACCACACGTACTTCTCTGTATCTGACATAAGTGAAGT
GCGCATTGAAGGCTTGGAGACACTGGACTACATTGACTGTCTGAGGGGAAAAGAGCGATC
CACAGAGCAAGGGGACGCTATTGTGTTCGAATCAGAGGTTGACAAAATATATCTAGATGC
ACCAGCAAAAATTGCAATCATTGATCATGAGAAGAAACGGACATTTGTCTTAAGGAAAGA
CGGGCTTCCAGATGCTGGTAAGCTTATTTATCACAGTAATTTTCTTTTGTTAAAGAATAT
GATTGTAGATCTTTGTATCCAGCTGACAAAAAACATGCAAGACTTTGGGGATGAAGAATA
CAAACATATGTTGTGTGTTGAACCTGCAGCCGTTGAGAAGCCCATTACCTTGAAGCCTGG
CGAAGAGTGGAAAGGAAAAATGGATCTCTCCGCAGTTCCTTCCAGTTACTGTAGCGGGCA
GTTAGATCCAAATAAGGTTCTTCAAGGCTGAGAGTTCTAATTTAC