Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0602100-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:30385523:30387154:1 gene:Os04g0602100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant ascorbate peroxidase domain containing protein. (Os04t0602100-01);Similar to B0403H10-OSIGBa0105A11.15 protein. (Os04t0602100-02)
Sequence

ATGGCGGGCGCGAGCTTCCTCTCGACCGTGCGGCAGCCTCCCGCGCCGCCGCCGCCGCTG
CTCGCCCCACGCGGCTCCGCTTCCTCCGTCTCGTCTCCCGCGCGACGGCACGCCCACATT
CTGGTGTGCTGCCATGCTACCGCGCAGGAAGAGCCTGTGCGATTCCGTAGAAGGGATTTA
ATCGGCGGCTGCTTGACTACTGCCATTGGCTTGGAATTAGTCGAGGGCTCTACAGGATTC
ACAGGAGTGGCTACTGCAGCTGATCTGATTGAGCGTCGACAACGCTCTGAATTCCAATCA
AGCATCAAAAGCACCCTCGCCACAGCCATAACGGCTAAAAAAGAGCTCATTCCATCTTTG
TTGACGTTGGCACTGAATGATGCCATGACATATGATAAGGCCACGAAGTCAGGAGGTCCA
AATGGATCGGTCAGGCTAAGTGCAGAAATAAGCAGACCTGAAAACAGTGGACTTTCTGCT
GCTGTGGATCTGCTAGTTGAAGCGAAAAAGGAGATAGATTCCTACTCCAAGGGAGGACCC
ATTGCATTTGCAGATCTGATCCAATTTGCAGCACAATCAGCACTCAAGCTAACATTCGTT
GATGCGGCCATTGCCAAATGTGGCGGGAACG

Peptide Sequence

PEP ID

Os04t0602100-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:30385523:30387154:1 gene:Os04g0602100 transcript:Os04t0602100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant ascorbate peroxidase domain containing protein. (Os04t0602100-01);Similar to B0403H10-OSIGBa0105A11.15 protein. (Os04t0602100-02)
Sequence

MAGASFLSTVRQPPAPPPPLLAPRGSASSVSSPARRHAHILVCCHATAQEEPVRFRRRDL
IGGCLTTAIGLELVEGSTGFTGVATAADLIERRQRSEFQSSIKSTLATAITAKKELIPSL
LTLALNDAMTYDKATKSGGPNGSVRLSAEISRPENSGLSAAVDLLVEAKKEIDSYSKGGP
IAFADLIQFAAQSALKLTFVDAAIAKCGGN

Transcript Sequence

Transcript ID

Os04t0602100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30385523:30387154:1 gene:Os04g0602100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant ascorbate peroxidase domain containing protein. (Os04t0602100-01);Similar to B0403H10-OSIGBa0105A11.15 protein. (Os04t0602100-02)
Sequence

GGGAAACTTATCCTGCTTTTGCCTTGCCCCCGTGTCTTCGCCACGCCAGCCGCCCCCCGC
CTGCCGACGAGGCCGCGGCCGCTGCTCAGTTCAGGCTCAGCTCGAGGGGATCGTGCGGTT
GGTTGCGCGAAGCGGCGGCGAGAAATGGCGGGCGCGAGCTTCCTCTCGACCGTGCGGCAG
CCTCCCGCGCCGCCGCCGCCGCTGCTCGCCCCACGCGGCTCCGCTTCCTCCGTCTCGTCT
CCCGCGCGACGGCACGCCCACATTCTGGTGTGCTGCCATGCTACCGCGCAGGAAGAGCCT
GTGCGATTCCGTAGAAGGGATTTAATCGGCGGCTGCTTGACTACTGCCATTGGCTTGGAA
TTAGTCGAGGGCTCTACAGGATTCACAGGAGTGGCTACTGCAGCTGATCTGATTGAGCGT
CGACAACGCTCTGAATTCCAATCAAGCATCAAAAGCACCCTCGCCACAGCCATAACGGCT
AAAAAAGAGCTCATTCCATCTTTGTTGACGTTGGCACTGAATGATGCCATGACATATGAT
AAGGCCACGAAGTCAGGAGGTCCAAATGGATCGGTCAGGCTAAGTGCAGAAATAAGCAGA
CCTGAAAACAGTGGACTTTCTGCTGCTGTGGATCTGCTAGTTGAAGCGAAAAAGGAGATA
GATTCCTACTCCAAGGGAGGACCCATTGCATTTGCAGATCTGATCCAATTTGCAGCACAA
TCAGCACTCAAGCTAACATTCGTTGATGCGGCCATTGCCAAATGTGGCGGGAACG