Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0599300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:30235422:30238854:-1 gene:Os04g0599300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETERNAL TAPETUM 1, ETERNAL TAPETUM1, basic helix-loop-helix protein 141, DELAYED TAPETUM DEGENERATION 1, delayed tapetum degeneration description:Basic helix-loop-helix transcription factor, Regulator of tapetal programmed cell death, Male reproductive development (Os04t0599300-01)
Sequence	ATGATTGTTGGGGCTGGTTACTTTGAGGATTCCCACGATCAAAGTCTCATGGCAGGATCT TTGATCCATGACTCAAATCAAGCTCCTGCAAGCAGTGAAAACACAAGCATTGATTTGCAG AAATTCAAAGTGCACCCGTACTCAACAGAAGCTCTCTCGAATACGGCCAATCTAGCTGAA GCTGCAAGAGCAATTAACCACCTTCAACATCAACTAGAAATTGATTTGGAGCAAGAGGTT CCCCCAGTAGAAACTGCAAACTGGGATCCAGCTATCTGCACTATACCAGATCATATCATC AACCATCAGTTTAGCGAAGATCCACAAAACATATTGGTGGAGCAACAGATCCAGCAGTAT GATTCTGCACTTTATCCAAATGGTGTTTACACACCTGCACCAGATCTCCTTAATCTTATG CAGTGCACAATGGCTCCAGCATTCCCGGCAACGACATCCGTATTCGGTGACACAACACTG AATGGTACTAACTATTTGGATCTTAACGGTGAACTTACAGGAGTAGCAGCGGTTCCAGAC AGTGGGAGTGGGTTGATGTTTGCTAGTGATTCAGCTCTCCAGTTAGGGTACCATGGTACT CAATCTCATCTAATAAAGGATATCTGCCACTCGTTGCCCCAAAATTATGGGTTGTTTCCC AGTGAGGACGAACGAGATGTGATTATTGGTGTTGGAAGTGGAGATCTTTTTCAGGAGATA GATGACAGGCAGTTTGATAGTGTACTTGAATGCAGGAGAGGGAAGGGTGAGTTCGGAAAG GGCAAGGGAAAAGCTAATTTTGCAACTGAGAGAGAGAGGCGGGAGCAGCTAAATGTGAAG TTCAGGACCCTAAGAATGCTCTTCCCAAATCCTACCAAGAATGACAGGGCCTCAATAGTA GGTGATGCCATTGAGTATATAGATGAGCTCAATCGAACAGTGAAGGAGCTGAAGATCCTG GTGGAACAGAAGAGGCATGGAAATAACAGGAGAAAGGTGTTAAAGTTGGATCAAGAGGCA GCCGCTGATGGCGAGAGCTCATCGATGAGGCCAGTGAGGGATGATCAAGACAATCAGCTC CATGGAGCCATAAGGAGCTCATGGGTTCAGAGGAGGTCAAAGGAATGCCACGTTGATGTC CGCATAGTGGACGATGAAGTAAACATCAAGCTCACTGAAAAGAAGAAGGCCAACTCTCTG CTTCATGCAGCAAAGGTTCTAGATGAGTTCCAGCTCGAGCTTATCCATGTAGTGGGTGGG ATTATAGGTGATCACCATATATTCATGTTCAACACTAAGGTATCAGAAGGTTCGGCGGTT TATGCATGTGCAGTGGCAAAGAAGCTCCTTCAAGCAGTGGACGTGCAACACCAGGCCCTC GACATATTCAACTAA

Peptide Sequence

PEP ID	Os04t0599300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:30235422:30238854:-1 gene:Os04g0599300 transcript:Os04t0599300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETERNAL TAPETUM 1, ETERNAL TAPETUM1, basic helix-loop-helix protein 141, DELAYED TAPETUM DEGENERATION 1, delayed tapetum degeneration description:Basic helix-loop-helix transcription factor, Regulator of tapetal programmed cell death, Male reproductive development (Os04t0599300-01)
Sequence	MIVGAGYFEDSHDQSLMAGSLIHDSNQAPASSENTSIDLQKFKVHPYSTEALSNTANLAE AARAINHLQHQLEIDLEQEVPPVETANWDPAICTIPDHIINHQFSEDPQNILVEQQIQQY DSALYPNGVYTPAPDLLNLMQCTMAPAFPATTSVFGDTTLNGTNYLDLNGELTGVAAVPD SGSGLMFASDSALQLGYHGTQSHLIKDICHSLPQNYGLFPSEDERDVIIGVGSGDLFQEI DDRQFDSVLECRRGKGEFGKGKGKANFATERERREQLNVKFRTLRMLFPNPTKNDRASIV GDAIEYIDELNRTVKELKILVEQKRHGNNRRKVLKLDQEAAADGESSSMRPVRDDQDNQL HGAIRSSWVQRRSKECHVDVRIVDDEVNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGG IIGDHHIFMFNTKVSEGSAVYACAVAKKLLQAVDVQHQALDIFN

Transcript Sequence

Transcript ID	Os04t0599300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:30235422:30238854:-1 gene:Os04g0599300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETERNAL TAPETUM 1, ETERNAL TAPETUM1, basic helix-loop-helix protein 141, DELAYED TAPETUM DEGENERATION 1, delayed tapetum degeneration description:Basic helix-loop-helix transcription factor, Regulator of tapetal programmed cell death, Male reproductive development (Os04t0599300-01)
Sequence	TTTGACCTTTATTATATGGTCATAAAGACCCTTCAGCAAAATGATTGTTACTGCTATCGG CATTTTCTGTTGTTTTTCTTTTGGAATCAATCTTGTGTGACACCATTGTATTGTTTCATG TCTTGCCACTATAATAGTCTTGGCATAGCACTGGATCTCATGAGTCTTTGAGCCGCAAAT TCATGAACATAAGTTCTTTCCATTCAACCGTTGGCTGAGGCAAAGATACAGATTTGGAGC GAAGGTGCCTAGCACTGTTTTGCCAAAATGATTGTTGGGGCTGGTTACTTTGAGGATTCC CACGATCAAAGTCTCATGGCAGGATCTTTGATCCATGACTCAAATCAAGCTCCTGCAAGC AGTGAAAACACAAGCATTGATTTGCAGAAATTCAAAGTGCACCCGTACTCAACAGAAGCT CTCTCGAATACGGCCAATCTAGCTGAAGCTGCAAGAGCAATTAACCACCTTCAACATCAA CTAGAAATTGATTTGGAGCAAGAGGTTCCCCCAGTAGAAACTGCAAACTGGGATCCAGCT ATCTGCACTATACCAGATCATATCATCAACCATCAGTTTAGCGAAGATCCACAAAACATA TTGGTGGAGCAACAGATCCAGCAGTATGATTCTGCACTTTATCCAAATGGTGTTTACACA CCTGCACCAGATCTCCTTAATCTTATGCAGTGCACAATGGCTCCAGCATTCCCGGCAACG ACATCCGTATTCGGTGACACAACACTGAATGGTACTAACTATTTGGATCTTAACGGTGAA CTTACAGGAGTAGCAGCGGTTCCAGACAGTGGGAGTGGGTTGATGTTTGCTAGTGATTCA GCTCTCCAGTTAGGGTACCATGGTACTCAATCTCATCTAATAAAGGATATCTGCCACTCG TTGCCCCAAAATTATGGGTTGTTTCCCAGTGAGGACGAACGAGATGTGATTATTGGTGTT GGAAGTGGAGATCTTTTTCAGGAGATAGATGACAGGCAGTTTGATAGTGTACTTGAATGC AGGAGAGGGAAGGGTGAGTTCGGAAAGGGCAAGGGAAAAGCTAATTTTGCAACTGAGAGA GAGAGGCGGGAGCAGCTAAATGTGAAGTTCAGGACCCTAAGAATGCTCTTCCCAAATCCT ACCAAGAATGACAGGGCCTCAATAGTAGGTGATGCCATTGAGTATATAGATGAGCTCAAT CGAACAGTGAAGGAGCTGAAGATCCTGGTGGAACAGAAGAGGCATGGAAATAACAGGAGA AAGGTGTTAAAGTTGGATCAAGAGGCAGCCGCTGATGGCGAGAGCTCATCGATGAGGCCA GTGAGGGATGATCAAGACAATCAGCTCCATGGAGCCATAAGGAGCTCATGGGTTCAGAGG AGGTCAAAGGAATGCCACGTTGATGTCCGCATAGTGGACGATGAAGTAAACATCAAGCTC ACTGAAAAGAAGAAGGCCAACTCTCTGCTTCATGCAGCAAAGGTTCTAGATGAGTTCCAG CTCGAGCTTATCCATGTAGTGGGTGGGATTATAGGTGATCACCATATATTCATGTTCAAC ACTAAGGTATCAGAAGGTTCGGCGGTTTATGCATGTGCAGTGGCAAAGAAGCTCCTTCAA GCAGTGGACGTGCAACACCAGGCCCTCGACATATTCAACTAATCTTTAGCAACAGTACTG ATTATCTGAACAATGTCCTAGATTTTCAGTTACCTTGCTGAGCAAACTTATTTGACCAGG ATTGGAGAGAATTTTATCTTTAGCACTAGCTACCTAGCAAAACTTCTTAACAATTTGGCC ATGTAACGGCTTGCTGCTGTCCGGTTGTACACCTTAACTAGCCTGACTAGGAAAGCTTTG ATGCTTGTCTTGTGT