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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0598300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:30182589:30185852:-1 gene:Os04g0598300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLO-LFY HOMOLOG OF RICE description:Probable transcription factor, Control of inflorescence, Flower development (Os04t0598300-01)
Sequence

ATGGATCCCAACGATGCCTTCTCGGCCGCGCACCCGTTCCGGTGGGACCTCGGCCCGCCG
GCGCCGGCGCCCGTGCCACCACCGCCGCCACCACCGCCGCCGCCGCCGCCGGCTAACGTG
CCCAGGGAGCTGGAGGAGCTGGTGGCAGGGTACGGCGTGCGGATGTCGACGGTGGCGCGG
ATCTCGGAGCTCGGGTTCACGGCGAGCACGCTCCTGGCCATGACGGAGCGCGAGCTCGAC
GACATGATGGCCGCGCTCGCCGGGCTGTTCCGCTGGGACCTGCTCCTCGGCGAGCGGTTC
GGCCTCCGCGCCGCGCTGCGAGCCGAGCGCGGCCGCCTGATGTCGCTCGGCGGCCGCCAC
CATGGGCACCAGTCCGGGAGCACCGTGGACGGCGCCTCCCAGGAAGTGTTGTCCGACGAG
CATGACATGGCGGGGAGCGGCGGCATGGGCGACGACGACAACGGCAGGAGGATGGTGACC
GGCAAGAAGCAGGCGAAGAAGGGATCCGCGGCGAGGAAGGGCAAGAAGGCGAGGAGGAAG
AAGGTGGACGACCTAAGGCTGGACATGCAGGAGGACGAGATGGACTGCTGCGACGAGGAC
GGCGGCGGCGGGTCGGAGTCGACGGAGTCGTCGGCCGGCGGCGGCGGCGGGGAGCGGCAG
AGGGAGCATCCTTTCGTGGTGACGGAGCCCGGCGAGGTGGCGAGGGCCAAGAAGAACGGG
CTGGACTACCTGTTCCATCTGTACGAGCAGTGCCGCCTCTTCCTGCTGCAGGTGCAATCC
ATGGCTAAGCTGCATGGACACAAGTCCCCAACCAAGGTGACGAACCAGGTGTTCCGGTAC
GCGAAGAAGGTCGGGGCGAGCTACATCAACAAGCCCAAGATGCGGCACTACGTGCACTGC
TACGCGCTGCACTGCCTGGACGAGGAGGCGTCGGACGCGCTGCGGCGCGCCTACAAGGCC
CGCGGCGAGAACGTGGGGGCGTGGAGGCAGGCCTGCTACGCGCCGCTCGTCGACATCTCC
GCGCGCCACGGATTCGACATCGACGCCGTCTTCGCCGCGCACCCGCGCCTCGCCATCTGG
TACGTGCCCACCAGACTCCGCCAGCTCTGCCACCAGGCGCGGAGCAGCCACGCCGCCGCC
GCCGCCGCGCTCCCGCCGCCCTTGTTCTAA

Peptide Sequence

PEP ID

Os04t0598300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:30182589:30185852:-1 gene:Os04g0598300 transcript:Os04t0598300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLO-LFY HOMOLOG OF RICE description:Probable transcription factor, Control of inflorescence, Flower development (Os04t0598300-01)
Sequence

MDPNDAFSAAHPFRWDLGPPAPAPVPPPPPPPPPPPPANVPRELEELVAGYGVRMSTVAR
ISELGFTASTLLAMTERELDDMMAALAGLFRWDLLLGERFGLRAALRAERGRLMSLGGRH
HGHQSGSTVDGASQEVLSDEHDMAGSGGMGDDDNGRRMVTGKKQAKKGSAARKGKKARRK
KVDDLRLDMQEDEMDCCDEDGGGGSESTESSAGGGGGERQREHPFVVTEPGEVARAKKNG
LDYLFHLYEQCRLFLLQVQSMAKLHGHKSPTKVTNQVFRYAKKVGASYINKPKMRHYVHC
YALHCLDEEASDALRRAYKARGENVGAWRQACYAPLVDISARHGFDIDAVFAAHPRLAIW
YVPTRLRQLCHQARSSHAAAAAALPPPLF

Transcript Sequence

Transcript ID

Os04t0598300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:30182589:30185852:-1 gene:Os04g0598300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FLO-LFY HOMOLOG OF RICE description:Probable transcription factor, Control of inflorescence, Flower development (Os04t0598300-01)
Sequence

CGAAACACAAGAAACAACCGGAGAAACCGAGCCCGGCCGACCGCAAGGACAGCAAGCTAG
TAGCCATCCTCGCATGGATCCCAACGATGCCTTCTCGGCCGCGCACCCGTTCCGGTGGGA
CCTCGGCCCGCCGGCGCCGGCGCCCGTGCCACCACCGCCGCCACCACCGCCGCCGCCGCC
GCCGGCTAACGTGCCCAGGGAGCTGGAGGAGCTGGTGGCAGGGTACGGCGTGCGGATGTC
GACGGTGGCGCGGATCTCGGAGCTCGGGTTCACGGCGAGCACGCTCCTGGCCATGACGGA
GCGCGAGCTCGACGACATGATGGCCGCGCTCGCCGGGCTGTTCCGCTGGGACCTGCTCCT
CGGCGAGCGGTTCGGCCTCCGCGCCGCGCTGCGAGCCGAGCGCGGCCGCCTGATGTCGCT
CGGCGGCCGCCACCATGGGCACCAGTCCGGGAGCACCGTGGACGGCGCCTCCCAGGAAGT
GTTGTCCGACGAGCATGACATGGCGGGGAGCGGCGGCATGGGCGACGACGACAACGGCAG
GAGGATGGTGACCGGCAAGAAGCAGGCGAAGAAGGGATCCGCGGCGAGGAAGGGCAAGAA
GGCGAGGAGGAAGAAGGTGGACGACCTAAGGCTGGACATGCAGGAGGACGAGATGGACTG
CTGCGACGAGGACGGCGGCGGCGGGTCGGAGTCGACGGAGTCGTCGGCCGGCGGCGGCGG
CGGGGAGCGGCAGAGGGAGCATCCTTTCGTGGTGACGGAGCCCGGCGAGGTGGCGAGGGC
CAAGAAGAACGGGCTGGACTACCTGTTCCATCTGTACGAGCAGTGCCGCCTCTTCCTGCT
GCAGGTGCAATCCATGGCTAAGCTGCATGGACACAAGTCCCCAACCAAGGTGACGAACCA
GGTGTTCCGGTACGCGAAGAAGGTCGGGGCGAGCTACATCAACAAGCCCAAGATGCGGCA
CTACGTGCACTGCTACGCGCTGCACTGCCTGGACGAGGAGGCGTCGGACGCGCTGCGGCG
CGCCTACAAGGCCCGCGGCGAGAACGTGGGGGCGTGGAGGCAGGCCTGCTACGCGCCGCT
CGTCGACATCTCCGCGCGCCACGGATTCGACATCGACGCCGTCTTCGCCGCGCACCCGCG
CCTCGCCATCTGGTACGTGCCCACCAGACTCCGCCAGCTCTGCCACCAGGCGCGGAGCAG
CCACGCCGCCGCCGCCGCCGCGCTCCCGCCGCCCTTGTTCTAAGCTCGCCGGAGACTCTG
CTGCTGTTCCCGCGCCGCCACGGCGCGTGGGAGTTTCCTGTGGTGTTGGGCCGTGTTTTC
GTTGTAAGGCAGTTAGGTCGTTCTAAGCTATTCGATGGGCCGATCGAGGATGCGTCGTCG
TGTAGGAACTCGTCGTGTACCCATGTTTGCGATCTGGATGGCCCATTTGTTTAGCTGTTA
CCATGTTAAATTCGTTTCCTTTATTTATGAAATGCTAAATCCTAAATGTCGTG